RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 SDSP20132 328 aa21.95■■□□□ 1.1
CLK1-211ENST00000481641 CNTN2Q02246 1040 aa21.95■■□□□ 1.1
CLK1-211ENST00000481641 CCDC174Q6PII3 467 aa21.95■■□□□ 1.1
CLK1-211ENST00000481641 MAMDC4Q6UXC1 1216 aa21.95■■□□□ 1.1
CLK1-211ENST00000481641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.95■■□□□ 1.1
CLK1-211ENST00000481641 FBXO40Q9UH90 709 aa21.95■■□□□ 1.1
CLK1-211ENST00000481641 CCDC171Q6TFL3 1326 aa21.95■■□□□ 1.1
CLK1-211ENST00000481641 SYNGAP1Q96PV0 1343 aa21.95■■□□□ 1.1
CLK1-211ENST00000481641 NOVP48745 357 aa21.94■■□□□ 1.1
CLK1-211ENST00000481641 PPP4R3BQ5MIZ7 849 aa21.94■■□□□ 1.1
CLK1-211ENST00000481641 MSL3Q8N5Y2 521 aaKnown RBP21.94■■□□□ 1.1
CLK1-211ENST00000481641 PRDM5Q9NQX1 630 aaPredicted RBP21.94■■□□□ 1.1
CLK1-211ENST00000481641 RNF146Q9NTX7 359 aa21.94■■□□□ 1.1
CLK1-211ENST00000481641 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.94■■□□□ 1.1
CLK1-211ENST00000481641 PRR12Q9ULL5 1215 aa21.94■■□□□ 1.1
CLK1-211ENST00000481641 PHF24Q9UPV7 400 aa21.94■■□□□ 1.1
CLK1-211ENST00000481641 ADAMTS4O75173 837 aa21.93■■□□□ 1.1
CLK1-211ENST00000481641 FDX1P10109 184 aa21.93■■□□□ 1.1
CLK1-211ENST00000481641 ALAS1P13196 640 aa21.93■■□□□ 1.1
CLK1-211ENST00000481641 IRX5P78411 483 aaPredicted RBP21.93■■□□□ 1.1
CLK1-211ENST00000481641 SNX17Q15036 470 aa21.93■■□□□ 1.1
CLK1-211ENST00000481641 CCDC96Q2M329 555 aa21.93■■□□□ 1.1
CLK1-211ENST00000481641 TTBK2Q6IQ55 1244 aa21.93■■□□□ 1.1
CLK1-211ENST00000481641 ZNF467Q7Z7K2 595 aaPredicted RBP21.93■■□□□ 1.1
CLK1-211ENST00000481641 RNF180Q86T96 592 aa21.93■■□□□ 1.1
CLK1-211ENST00000481641 LBHD1Q9BQE6 289 aaPredicted RBP21.93■■□□□ 1.1
CLK1-211ENST00000481641 ACAD9Q9H845 621 aa21.93■■□□□ 1.1
CLK1-211ENST00000481641 PRKAG2Q9UGJ0 569 aa21.93■■□□□ 1.1
CLK1-211ENST00000481641 FAM184BQ9ULE4 1060 aa21.93■■□□□ 1.1
CLK1-211ENST00000481641 ADCY6O43306 1168 aa21.92■■□□□ 1.1
CLK1-211ENST00000481641 PLA2G6O60733 806 aa21.92■■□□□ 1.1
CLK1-211ENST00000481641 SLC16A2P36021 539 aa21.92■■□□□ 1.1
CLK1-211ENST00000481641 ACVR2BQ13705 512 aa21.92■■□□□ 1.1
CLK1-211ENST00000481641 LRIT3Q3SXY7 679 aa21.92■■□□□ 1.1
CLK1-211ENST00000481641 ARMCX2Q7L311 632 aa21.92■■□□□ 1.1
CLK1-211ENST00000481641 SH3RF1Q7Z6J0 888 aa21.92■■□□□ 1.1
CLK1-211ENST00000481641 TICAM2Q86XR7 235 aa21.92■■□□□ 1.1
CLK1-211ENST00000481641 TBC1D10CQ8IV04 446 aa21.92■■□□□ 1.1
CLK1-211ENST00000481641 TRERF1Q96PN7 1200 aa21.92■■□□□ 1.1
CLK1-211ENST00000481641 TMEM47Q9BQJ4 181 aa21.92■■□□□ 1.1
CLK1-211ENST00000481641 OSBPL3Q9H4L5 887 aa21.92■■□□□ 1.1
CLK1-211ENST00000481641 A1CFQ9NQ94 594 aaKnown RBP21.92■■□□□ 1.1
CLK1-211ENST00000481641 ZMYM6O95789 1325 aa21.91■■□□□ 1.1
CLK1-211ENST00000481641 FRMPD2Q68DX3 1309 aaPredicted RBP21.91■■□□□ 1.1
CLK1-211ENST00000481641 SYNRGQ9UMZ2 1314 aa21.91■■□□□ 1.1
CLK1-211ENST00000481641 MYADML2A6NDP7 307 aa21.91■■□□□ 1.1
CLK1-211ENST00000481641 POTEB2H3BUK9 544 aa21.91■■□□□ 1.1
CLK1-211ENST00000481641 TLE2Q04725 743 aa21.91■■□□□ 1.1
CLK1-211ENST00000481641 MUM1L1Q5H9M0 696 aa21.91■■□□□ 1.1
CLK1-211ENST00000481641 CCDC144CPQ8IYA2 1237 aa21.91■■□□□ 1.1
CLK1-211ENST00000481641 SUPT16HQ9Y5B9 1047 aaKnown RBP21.91■■□□□ 1.1
CLK1-211ENST00000481641 DDX49Q9Y6V7 483 aaKnown RBP21.91■■□□□ 1.1
CLK1-211ENST00000481641 LTBP2Q14767 1821 aa21.91■■□□□ 1.1
CLK1-211ENST00000481641 A0A1W2PQ45 241 aaPredicted RBP21.9■■□□□ 1.1
CLK1-211ENST00000481641 A0A1W2PQY0 241 aa21.9■■□□□ 1.1
CLK1-211ENST00000481641 TRIM43BA6NCK2 446 aa21.9■■□□□ 1.1
CLK1-211ENST00000481641 SOWAHBA6NEL2 793 aa21.9■■□□□ 1.1
CLK1-211ENST00000481641 CCDC144BQ3MJ40 725 aa21.9■■□□□ 1.1
CLK1-211ENST00000481641 AKNAD1Q5T1N1 836 aa21.9■■□□□ 1.1
CLK1-211ENST00000481641 CWC27Q6UX04 472 aaKnown RBP21.9■■□□□ 1.1
CLK1-211ENST00000481641 Q7L0L9 218 aa21.9■■□□□ 1.1
CLK1-211ENST00000481641 FAM133AQ8N9E0 248 aa21.9■■□□□ 1.1
CLK1-211ENST00000481641 DCAF4Q8WV16 495 aa21.9■■□□□ 1.1
CLK1-211ENST00000481641 TRIM43Q96BQ3 446 aaPredicted RBP21.9■■□□□ 1.1
CLK1-211ENST00000481641 GPCPD1Q9NPB8 672 aa21.9■■□□□ 1.1
CLK1-211ENST00000481641 PDLIM7Q9NR12 457 aa21.9■■□□□ 1.1
CLK1-211ENST00000481641 TOP1P11387 765 aaKnown RBP21.89■■□□□ 1.09
CLK1-211ENST00000481641 TKFCQ3LXA3 575 aa21.89■■□□□ 1.09
CLK1-211ENST00000481641 MFSD6Q6ZSS7 791 aa21.89■■□□□ 1.09
CLK1-211ENST00000481641 KLHDC9Q8NEP7 349 aa21.89■■□□□ 1.09
CLK1-211ENST00000481641 BADQ92934 168 aa21.89■■□□□ 1.09
CLK1-211ENST00000481641 KATNBL1Q9H079 304 aa21.89■■□□□ 1.09
CLK1-211ENST00000481641 ABHD16BQ9H3Z7 469 aa21.89■■□□□ 1.09
CLK1-211ENST00000481641 TCP11L1Q9NUJ3 509 aa21.89■■□□□ 1.09
CLK1-211ENST00000481641 NEDD4P46934 1319 aa21.88■■□□□ 1.09
CLK1-211ENST00000481641 DUSP11O75319 330 aaKnown RBP21.88■■□□□ 1.09
CLK1-211ENST00000481641 ACLYP53396 1101 aa21.88■■□□□ 1.09
CLK1-211ENST00000481641 KCNA10Q16322 511 aa21.88■■□□□ 1.09
CLK1-211ENST00000481641 C1orf53Q5VUE5 145 aa21.88■■□□□ 1.09
CLK1-211ENST00000481641 PURBQ96QR8 312 aaKnown RBP21.88■■□□□ 1.09
CLK1-211ENST00000481641 DIAPH3Q9NSV4 1193 aa21.88■■□□□ 1.09
CLK1-211ENST00000481641 CCPG1Q9ULG6 757 aa21.88■■□□□ 1.09
CLK1-211ENST00000481641 ASTN1O14525 1302 aa21.87■■□□□ 1.09
CLK1-211ENST00000481641 PQBP1O60828 265 aaKnown RBP21.87■■□□□ 1.09
CLK1-211ENST00000481641 MFAP1P55081 439 aaKnown RBP21.87■■□□□ 1.09
CLK1-211ENST00000481641 SYDE2Q5VT97 1194 aa21.87■■□□□ 1.09
CLK1-211ENST00000481641 CCSAPQ6IQ19 270 aaPredicted RBP21.87■■□□□ 1.09
CLK1-211ENST00000481641 ZKSCAN3Q9BRR0 538 aa21.87■■□□□ 1.09
CLK1-211ENST00000481641 TSEN34Q9BSV6 310 aaKnown RBP21.87■■□□□ 1.09
CLK1-211ENST00000481641 RANBP17Q9H2T7 1088 aaKnown RBP21.87■■□□□ 1.09
CLK1-211ENST00000481641 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.86■■□□□ 1.09
CLK1-211ENST00000481641 C6orf222P0C671 652 aaPredicted RBP21.86■■□□□ 1.09
CLK1-211ENST00000481641 ITGB8P26012 769 aa21.86■■□□□ 1.09
CLK1-211ENST00000481641 BTNL9Q6UXG8 535 aa21.86■■□□□ 1.09
CLK1-211ENST00000481641 NSMFQ6X4W1 530 aa21.86■■□□□ 1.09
CLK1-211ENST00000481641 DEFB123Q8N688 67 aa21.86■■□□□ 1.09
CLK1-211ENST00000481641 STARD7Q9NQZ5 370 aa21.86■■□□□ 1.09
CLK1-211ENST00000481641 CYP39A1Q9NYL5 469 aa21.86■■□□□ 1.09
CLK1-211ENST00000481641 ZNF213O14771 459 aa21.85■■□□□ 1.09
CLK1-211ENST00000481641 ICAM1P05362 532 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms