RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 PTPAQ15257 358 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 EARS2Q5JPH6 523 aaKnown RBP11.37□□□□□ -0.59
COMMD4-203ENST00000480484 GSPT2Q8IYD1 628 aaKnown RBP11.37□□□□□ -0.59
COMMD4-203ENST00000480484 SERTAD1Q9UHV2 236 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 ENC1O14682 589 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 SYF2O95926 243 aaKnown RBP11.37□□□□□ -0.59
COMMD4-203ENST00000480484 ZNF18P17022 549 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 EIF5P55010 431 aaKnown RBP11.37□□□□□ -0.59
COMMD4-203ENST00000480484 TRDNQ13061 729 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 IMMTQ16891 758 aaKnown RBP11.37□□□□□ -0.59
COMMD4-203ENST00000480484 TTC19Q6DKK2 380 aaPredicted RBP11.37□□□□□ -0.59
COMMD4-203ENST00000480484 KIF13BQ9NQT8 1826 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 UBN2Q6ZU65 1347 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 GOLGA6CA6NDK9 693 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 GOLGA6BA6NDN3 693 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 IRS4O14654 1257 aaPredicted RBP11.37□□□□□ -0.59
COMMD4-203ENST00000480484 PPP6R2O75170 966 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 GOLGA6DP0CG33 693 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 TOB1P50616 345 aaPredicted RBP11.37□□□□□ -0.59
COMMD4-203ENST00000480484 TRIM28Q13263 835 aaKnown RBP11.37□□□□□ -0.59
COMMD4-203ENST00000480484 NR1I3Q14994 352 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 CACTIN-AS1Q8N1I8 211 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 KAT2BQ92831 832 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 CAPZA3Q96KX2 299 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 PANX2Q96RD6 677 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 CRACR2AQ9BSW2 395 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 GOLGA6AQ9NYA3 693 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 TRMT112Q9UI30 125 aaKnown RBP11.37□□□□□ -0.59
COMMD4-203ENST00000480484 DACH1Q9UI36 760 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 MYO6Q9UM54 1294 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 GUCA1BQ9UMX6 200 aa11.37□□□□□ -0.59
COMMD4-203ENST00000480484 GPAA1O43292 621 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 PRKAB2O43741 272 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
COMMD4-203ENST00000480484 AFMP43652 599 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 CTSWP56202 376 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 DPYDQ12882 1025 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 TRIM29Q14134 588 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 WHAMMP3Q1A5X7 153 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 ENOX1Q8TC92 643 aaKnown RBP11.36□□□□□ -0.59
COMMD4-203ENST00000480484 MAP3K14Q99558 947 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 SLF1Q9BQI6 1058 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 CRISPLD2Q9H0B8 497 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 EHD4Q9H223 541 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 PIH1D3Q9NQM4 214 aaKnown RBP11.36□□□□□ -0.59
COMMD4-203ENST00000480484 CHST12Q9NRB3 414 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 CNNM1Q9NRU3 951 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 MAPK8IP1Q9UQF2 711 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 EBAG9O00559 213 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 MAP2K2P36507 400 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 GGCXP38435 758 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 CCT6AP40227 531 aaKnown RBP11.36□□□□□ -0.59
COMMD4-203ENST00000480484 STIM1Q13586 685 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 RRP12Q5JTH9 1297 aaKnown RBP11.36□□□□□ -0.59
COMMD4-203ENST00000480484 EP400NLQ6ZTU2 488 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 ANKRD20A12PQ8NF67 263 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 FAM217BQ9NTX9 383 aaPredicted RBP11.36□□□□□ -0.59
COMMD4-203ENST00000480484 PCDHB6Q9Y5E3 794 aa11.36□□□□□ -0.59
COMMD4-203ENST00000480484 PHKA1P46020 1223 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 SUGP1Q8IWZ8 645 aaKnown RBP11.35□□□□□ -0.59
COMMD4-203ENST00000480484 MLKLQ8NB16 471 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 ZNF622Q969S3 477 aaKnown RBP eCLIP11.35□□□□□ -0.59
COMMD4-203ENST00000480484 PLA2G12BQ9BX93 195 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 CXorf56Q9H5V9 222 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 KAT14Q9H8E8 782 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 HDAC6Q9UBN7 1215 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 FAM169AQ9Y6X4 670 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 BCORQ6W2J9 1755 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 PRDM1O75626 825 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 METAP2P50579 478 aaKnown RBP eCLIP11.35□□□□□ -0.59
COMMD4-203ENST00000480484 RASGRP2Q7LDG7 609 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 C1orf131Q8NDD1 294 aaKnown RBP11.35□□□□□ -0.59
COMMD4-203ENST00000480484 CTCFLQ8NI51 663 aaPredicted RBP11.35□□□□□ -0.59
COMMD4-203ENST00000480484 ACSBG1Q96GR2 724 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 SLC26A6Q9BXS9 759 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 CLGNO14967 610 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 SRGAP2O75044 1071 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 MFAP3LO75121 409 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 IDH1O75874 414 aaKnown RBP11.35□□□□□ -0.59
COMMD4-203ENST00000480484 FXR1P51114 621 aaKnown RBP eCLIP11.35□□□□□ -0.59
COMMD4-203ENST00000480484 SLC4A8Q2Y0W8 1093 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 CT47A1Q5JQC4 288 aaPredicted RBP11.35□□□□□ -0.59
COMMD4-203ENST00000480484 FAM76AQ8TAV0 307 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 EPSTI1Q96J88 318 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 EMILIN3Q9NT22 766 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 HPCAL4Q9UM19 191 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 SAMM50Q9Y512 469 aa11.35□□□□□ -0.59
COMMD4-203ENST00000480484 A0A1B0GTH6 734 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 NKRFO15226 690 aaKnown RBP eCLIP11.34□□□□□ -0.59
COMMD4-203ENST00000480484 TUBB4BP68371 445 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 TUBB2AQ13885 445 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 DZIP3Q86Y13 1208 aaKnown RBP11.34□□□□□ -0.59
COMMD4-203ENST00000480484 MSL3Q8N5Y2 521 aaKnown RBP11.34□□□□□ -0.59
COMMD4-203ENST00000480484 VGLL2Q8N8G2 317 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 NCOA7Q8NI08 942 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 BCAS4Q8TDM0 211 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.34□□□□□ -0.59
COMMD4-203ENST00000480484 NUP88Q99567 741 aaPredicted RBP11.34□□□□□ -0.59
COMMD4-203ENST00000480484 TUBB2BQ9BVA1 445 aa11.34□□□□□ -0.59
COMMD4-203ENST00000480484 NAA15Q9BXJ9 866 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms