RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 METTL16Q86W50 562 aaKnown RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 CLASRPQ8N2M8 674 aaKnown RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 SPATA5Q8NB90 893 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 PANK1Q8TE04 598 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 PRMT6Q96LA8 375 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 GLIS2Q9BZE0 524 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 SIL1Q9H173 461 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 BRD7Q9NPI1 651 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 PRDM10Q9NQV6 1147 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 GINM1Q9NU53 330 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 TNNQ9UQP3 1299 aa5.98□□□□□ -1.45
PTCD3-213ENST00000480102 DNMT3AQ9Y6K1 912 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-213ENST00000480102 MYH3P11055 1940 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 PLIN1O60240 522 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 EPXP11678 715 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 PHKA1P46020 1223 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 TIMM10P62072 90 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 IER5Q5VY09 327 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 RGMBQ6NW40 437 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 ARMC9Q7Z3E5 817 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 BTLAQ7Z6A9 289 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 USP48Q86UV5 1035 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 FAM151AQ8WW52 585 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 NSUN4Q96CB9 384 aaKnown RBP5.97□□□□□ -1.45
PTCD3-213ENST00000480102 EAF2Q96CJ1 260 aaPredicted RBP5.97□□□□□ -1.45
PTCD3-213ENST00000480102 CDCA5Q96FF9 252 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 CEP63Q96MT8 703 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 TEPSINQ96N21 525 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 ZCCHC17Q9NP64 241 aaKnown RBP5.97□□□□□ -1.45
PTCD3-213ENST00000480102 TMOD2Q9NZR1 351 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 HMG20BQ9P0W2 317 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 ZNF70Q9UC06 446 aaPredicted RBP5.97□□□□□ -1.45
PTCD3-213ENST00000480102 KLF15Q9UIH9 416 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 DBNLQ9UJU6 430 aaKnown RBP5.97□□□□□ -1.45
PTCD3-213ENST00000480102 PRR12Q9ULL5 1215 aa5.97□□□□□ -1.45
PTCD3-213ENST00000480102 WDR33Q9C0J8 1336 aaKnown RBP5.97□□□□□ -1.45
PTCD3-213ENST00000480102 THSD7BQ9C0I4 1608 aa5.96□□□□□ -1.45
PTCD3-213ENST00000480102 SHTN1A0MZ66 631 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 FAM155AB1AL88 458 aaPredicted RBP5.96□□□□□ -1.46
PTCD3-213ENST00000480102 TGFBR3LH3BV60 316 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 TRAF5O00463 557 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 PRMT3O60678 531 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 ATP5JP18859 108 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 IREB2P48200 963 aaKnown RBP5.96□□□□□ -1.46
PTCD3-213ENST00000480102 TM4SF4P48230 202 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 HUNKP57058 714 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 RASA3Q14644 834 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 GRIN2CQ14957 1233 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 OCLNQ16625 522 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 GORABQ5T7V8 394 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 TMEM164Q5U3C3 297 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 KANK3Q6NY19 840 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 FCHSD1Q86WN1 690 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 ANKRD13AQ8IZ07 590 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 VTI1AQ96AJ9 217 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 GCC1Q96CN9 775 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 CAPNS2Q96L46 248 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 LRRCC1Q9C099 1032 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 DHX36Q9H2U1 1008 aaKnown RBP5.96□□□□□ -1.46
PTCD3-213ENST00000480102 ZNF112Q9UJU3 913 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 DAGLAQ9Y4D2 1042 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 MROH7-TTC4A0A0A0MT08 1334 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 CNTNAP5Q8WYK1 1306 aa5.96□□□□□ -1.46
PTCD3-213ENST00000480102 PSME4Q14997 1843 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 PHF20L1A8MW92 1017 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 BAG3O95817 575 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 PRDX5P30044 214 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 ADORA1P30542 326 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 IRS1P35568 1242 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 MCAMP43121 646 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 NT5C2P49902 561 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 PCBP4P57723 403 aaKnown RBP5.95□□□□□ -1.46
PTCD3-213ENST00000480102 RHBDL3P58872 404 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 SNRPNP63162 240 aaKnown RBP5.95□□□□□ -1.46
PTCD3-213ENST00000480102 PDE4CQ08493 712 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 SPEM2Q0P670 501 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 SREBF2Q12772 1141 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 OS9Q13438 667 aaPredicted RBP5.95□□□□□ -1.46
PTCD3-213ENST00000480102 NOL9Q5SY16 702 aaKnown RBP5.95□□□□□ -1.46
PTCD3-213ENST00000480102 C20orf194Q5TEA3 1177 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 DCAF15Q66K64 600 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 CDC42EP5Q6NZY7 148 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 SYT9Q86SS6 491 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 BEND7Q8N7W2 519 aaPredicted RBP5.95□□□□□ -1.46
PTCD3-213ENST00000480102 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.95□□□□□ -1.46
PTCD3-213ENST00000480102 MYO19Q96H55 970 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 SLC30A3Q99726 388 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 MXD3Q9BW11 206 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 HERC5Q9UII4 1024 aaKnown RBP5.95□□□□□ -1.46
PTCD3-213ENST00000480102 ABT1Q9ULW3 272 aaKnown RBP5.95□□□□□ -1.46
PTCD3-213ENST00000480102 KCNH4Q9UQ05 1017 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 PAPPA2Q9BXP8 1791 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 TTC41PQ6P2S7 1318 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 SCN9AQ15858 1988 aa5.95□□□□□ -1.46
PTCD3-213ENST00000480102 ADM5C9JUS6 153 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 SIN3BO75182 1162 aa5.94□□□□□ -1.46
PTCD3-213ENST00000480102 WDHD1O75717 1129 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-213ENST00000480102 CYP2E1P05181 493 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-213ENST00000480102 HOXB4P17483 251 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-213ENST00000480102 AMPD1P23109 780 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms