RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 MRPL12P52815 198 aaKnown RBP12.56□□□□□ -0.4
VTI1A-204ENST00000480057 SHROOM1Q2M3G4 852 aaPredicted RBP12.56□□□□□ -0.4
VTI1A-204ENST00000480057 SYDE2Q5VT97 1194 aa12.56□□□□□ -0.4
VTI1A-204ENST00000480057 KANK3Q6NY19 840 aa12.56□□□□□ -0.4
VTI1A-204ENST00000480057 KCTD1Q719H9 257 aa12.56□□□□□ -0.4
VTI1A-204ENST00000480057 FAM200AQ8TCP9 573 aa12.56□□□□□ -0.4
VTI1A-204ENST00000480057 CCDC34Q96HJ3 373 aa12.56□□□□□ -0.4
VTI1A-204ENST00000480057 NAP1L4Q99733 375 aaKnown RBP12.56□□□□□ -0.4
VTI1A-204ENST00000480057 SDF4Q9BRK5 362 aa12.56□□□□□ -0.4
VTI1A-204ENST00000480057 HACL1Q9UJ83 578 aa12.56□□□□□ -0.4
VTI1A-204ENST00000480057 KCNH3Q9ULD8 1083 aa12.56□□□□□ -0.4
VTI1A-204ENST00000480057 PITPNM2Q9BZ72 1349 aa12.56□□□□□ -0.4
VTI1A-204ENST00000480057 ATAD5Q96QE3 1844 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 A0A1W2PRG0 241 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 USP17L10C9JJH3 530 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 CTNND1O60716 968 aaKnown RBP12.55□□□□□ -0.4
VTI1A-204ENST00000480057 ATP2B1P20020 1258 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 LONP1P36776 959 aaKnown RBP12.55□□□□□ -0.4
VTI1A-204ENST00000480057 CLK2P49760 499 aaKnown RBP12.55□□□□□ -0.4
VTI1A-204ENST00000480057 CCDC173Q0VFZ6 552 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 PTGDRQ13258 359 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 ZNF174Q15697 407 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 CDC37Q16543 378 aaPredicted RBP12.55□□□□□ -0.4
VTI1A-204ENST00000480057 STX1AQ16623 288 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 TBC1D10BQ4KMP7 808 aaPredicted RBP12.55□□□□□ -0.4
VTI1A-204ENST00000480057 NOM1Q5C9Z4 860 aaKnown RBP12.55□□□□□ -0.4
VTI1A-204ENST00000480057 SAMD7Q7Z3H4 446 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 NEK8Q86SG6 692 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 FAM160B2Q86V87 743 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 CKAP2LQ8IYA6 745 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 C4orf32Q8N8J7 132 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 CUL5Q93034 780 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 CLIC6Q96NY7 704 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 PPP1R9BQ96SB3 815 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 AMNQ9BXJ7 453 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 DEFB129Q9H1M3 183 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 VCPKMTQ9H867 229 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 ANO10Q9NW15 660 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 KIAA1468Q9P260 1216 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 MRVI1Q9Y6F6 885 aa12.55□□□□□ -0.4
VTI1A-204ENST00000480057 PPP1R11O60927 126 aaPredicted RBP12.54□□□□□ -0.4
VTI1A-204ENST00000480057 EGFRP00533 1210 aa12.54□□□□□ -0.4
VTI1A-204ENST00000480057 SLC16A2P36021 539 aa12.54□□□□□ -0.4
VTI1A-204ENST00000480057 QRICH1Q2TAL8 776 aa12.54□□□□□ -0.4
VTI1A-204ENST00000480057 KRBA2Q6ZNG9 492 aa12.54□□□□□ -0.4
VTI1A-204ENST00000480057 CHURC1Q8WUH1 139 aa12.54□□□□□ -0.4
VTI1A-204ENST00000480057 SYT17Q9BSW7 474 aa12.54□□□□□ -0.4
VTI1A-204ENST00000480057 ZNF341Q9BYN7 854 aa12.54□□□□□ -0.4
VTI1A-204ENST00000480057 CSRNP2Q9H175 543 aa12.54□□□□□ -0.4
VTI1A-204ENST00000480057 ZNF112Q9UJU3 913 aa12.54□□□□□ -0.4
VTI1A-204ENST00000480057 DOCK1Q14185 1865 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 TMEM232C9JQI7 657 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 WNT7AO00755 349 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 ADAMTS3O15072 1205 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 MCM7P33993 719 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 STAT2P52630 851 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 AP3B2Q13367 1082 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 INF2Q27J81 1249 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 MIGA2Q7L4E1 593 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 CDAN1Q8IWY9 1227 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 CNNM3Q8NE01 707 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 RASGRP4Q8TDF6 673 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 LPAR1Q92633 364 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 COA7Q96BR5 231 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 PANK2Q9BZ23 570 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 KIAA1683Q9H0B3 1180 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 TUBE1Q9UJT0 475 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 FEM1BQ9UK73 627 aa12.53□□□□□ -0.4
VTI1A-204ENST00000480057 GCFC2P16383 781 aaKnown RBP12.52□□□□□ -0.41
VTI1A-204ENST00000480057 ECE1P42892 770 aa12.52□□□□□ -0.41
VTI1A-204ENST00000480057 ZRSR1Q15695 479 aaKnown RBP12.52□□□□□ -0.41
VTI1A-204ENST00000480057 ANGEL2Q5VTE6 544 aaKnown RBP12.52□□□□□ -0.41
VTI1A-204ENST00000480057 PPP4R3AQ6IN85 833 aa12.52□□□□□ -0.41
VTI1A-204ENST00000480057 DTHD1Q6ZMT9 781 aa12.52□□□□□ -0.41
VTI1A-204ENST00000480057 FBXO11Q86XK2 927 aa12.52□□□□□ -0.41
VTI1A-204ENST00000480057 RNF214Q8ND24 703 aa12.52□□□□□ -0.41
VTI1A-204ENST00000480057 ACER1Q8TDN7 264 aa12.52□□□□□ -0.41
VTI1A-204ENST00000480057 PDLIM2Q96JY6 352 aa12.52□□□□□ -0.41
VTI1A-204ENST00000480057 AK8Q96MA6 479 aa12.52□□□□□ -0.41
VTI1A-204ENST00000480057 BPIFA3Q9BQP9 254 aa12.52□□□□□ -0.41
VTI1A-204ENST00000480057 NAT10Q9H0A0 1025 aaKnown RBP12.52□□□□□ -0.41
VTI1A-204ENST00000480057 PSTPIP2Q9H939 334 aa12.52□□□□□ -0.41
VTI1A-204ENST00000480057 ADARB2Q9NS39 739 aaKnown RBP12.52□□□□□ -0.41
VTI1A-204ENST00000480057 PNMA2Q9UL42 364 aa12.52□□□□□ -0.41
VTI1A-204ENST00000480057 PRR12Q9ULL5 1215 aa12.52□□□□□ -0.41
VTI1A-204ENST00000480057 PCDHA1Q9Y5I3 950 aa12.52□□□□□ -0.41
VTI1A-204ENST00000480057 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.41
VTI1A-204ENST00000480057 WDR46O15213 610 aaKnown RBP12.51□□□□□ -0.41
VTI1A-204ENST00000480057 RAD21O60216 631 aa12.51□□□□□ -0.41
VTI1A-204ENST00000480057 FOSP01100 380 aaPredicted RBP12.51□□□□□ -0.41
VTI1A-204ENST00000480057 OR52Z1P0C646 297 aa12.51□□□□□ -0.41
VTI1A-204ENST00000480057 LMOD1P29536 600 aaPredicted RBP12.51□□□□□ -0.41
VTI1A-204ENST00000480057 TXLNAP40222 546 aa12.51□□□□□ -0.41
VTI1A-204ENST00000480057 USP14P54578 494 aa12.51□□□□□ -0.41
VTI1A-204ENST00000480057 GRIN1Q05586 938 aa12.51□□□□□ -0.41
VTI1A-204ENST00000480057 LONRF3Q496Y0 759 aa12.51□□□□□ -0.41
VTI1A-204ENST00000480057 ANO6Q4KMQ2 910 aa12.51□□□□□ -0.41
VTI1A-204ENST00000480057 MOXD1Q6UVY6 613 aa12.51□□□□□ -0.41
VTI1A-204ENST00000480057 CEP57L1Q8IYX8 460 aa12.51□□□□□ -0.41
VTI1A-204ENST00000480057 TRPM4Q8TD43 1214 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms