RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 C1orf53Q5VUE5 145 aa17.72■□□□□ 0.43
PRKN-207ENST00000479615 KCTD1Q719H9 257 aa17.72■□□□□ 0.43
PRKN-207ENST00000479615 RUFY2Q8WXA3 655 aa17.72■□□□□ 0.43
PRKN-207ENST00000479615 GDF15Q99988 308 aa17.72■□□□□ 0.43
PRKN-207ENST00000479615 TACC3Q9Y6A5 838 aa17.72■□□□□ 0.43
PRKN-207ENST00000479615 ZNF536O15090 1300 aa17.72■□□□□ 0.43
PRKN-207ENST00000479615 ASB14A6NK59 587 aa17.71■□□□□ 0.43
PRKN-207ENST00000479615 POTEB2H3BUK9 544 aa17.71■□□□□ 0.43
PRKN-207ENST00000479615 ICAM1P05362 532 aa17.71■□□□□ 0.43
PRKN-207ENST00000479615 LRRC41Q15345 812 aa17.71■□□□□ 0.43
PRKN-207ENST00000479615 GJC2Q5T442 439 aaPredicted RBP17.71■□□□□ 0.43
PRKN-207ENST00000479615 TRERF1Q96PN7 1200 aa17.71■□□□□ 0.43
PRKN-207ENST00000479615 CNNM2Q9H8M5 875 aa17.71■□□□□ 0.43
PRKN-207ENST00000479615 RNF146Q9NTX7 359 aa17.71■□□□□ 0.43
PRKN-207ENST00000479615 PRKAG2Q9UGJ0 569 aa17.71■□□□□ 0.43
PRKN-207ENST00000479615 RAD50Q92878 1312 aa17.71■□□□□ 0.42
PRKN-207ENST00000479615 GPATCH4Q5T3I0 446 aaKnown RBP17.7■□□□□ 0.42
PRKN-207ENST00000479615 TTC22Q5TAA0 569 aa17.7■□□□□ 0.42
PRKN-207ENST00000479615 AGBL1Q96MI9 1066 aa17.7■□□□□ 0.42
PRKN-207ENST00000479615 TSEN34Q9BSV6 310 aaKnown RBP17.7■□□□□ 0.42
PRKN-207ENST00000479615 KRT23Q9C075 422 aa17.7■□□□□ 0.42
PRKN-207ENST00000479615 RANBP17Q9H2T7 1088 aaKnown RBP17.7■□□□□ 0.42
PRKN-207ENST00000479615 SPC25Q9HBM1 224 aa17.7■□□□□ 0.42
PRKN-207ENST00000479615 ZMYND8Q9ULU4 1186 aaPredicted RBP17.7■□□□□ 0.42
PRKN-207ENST00000479615 PHF24Q9UPV7 400 aa17.7■□□□□ 0.42
PRKN-207ENST00000479615 COL11A1P12107 1806 aaPredicted RBP17.7■□□□□ 0.42
PRKN-207ENST00000479615 LOC102724159A0A0B4J2E5 919 aa17.69■□□□□ 0.42
PRKN-207ENST00000479615 DUSP11O75319 330 aaKnown RBP17.69■□□□□ 0.42
PRKN-207ENST00000479615 SNAI1O95863 264 aaPredicted RBP17.69■□□□□ 0.42
PRKN-207ENST00000479615 PDHBP11177 359 aa17.69■□□□□ 0.42
PRKN-207ENST00000479615 ALAS1P13196 640 aa17.69■□□□□ 0.42
PRKN-207ENST00000479615 ACVR2BQ13705 512 aa17.69■□□□□ 0.42
PRKN-207ENST00000479615 SNX17Q15036 470 aa17.69■□□□□ 0.42
PRKN-207ENST00000479615 PWP2Q15269 919 aaKnown RBP17.69■□□□□ 0.42
PRKN-207ENST00000479615 SYDE2Q5VT97 1194 aa17.69■□□□□ 0.42
PRKN-207ENST00000479615 SLC39A5Q6ZMH5 540 aa17.69■□□□□ 0.42
PRKN-207ENST00000479615 TBC1D10CQ8IV04 446 aa17.69■□□□□ 0.42
PRKN-207ENST00000479615 FAM133AQ8N9E0 248 aa17.69■□□□□ 0.42
PRKN-207ENST00000479615 ANKS1AQ92625 1134 aa17.69■□□□□ 0.42
PRKN-207ENST00000479615 MAF1Q9H063 256 aa17.69■□□□□ 0.42
PRKN-207ENST00000479615 HOMER2Q9NSB8 354 aa17.69■□□□□ 0.42
PRKN-207ENST00000479615 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.69■□□□□ 0.42
PRKN-207ENST00000479615 CCPG1Q9ULG6 757 aa17.69■□□□□ 0.42
PRKN-207ENST00000479615 MOXD2PA6NHM9 499 aa17.68■□□□□ 0.42
PRKN-207ENST00000479615 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
PRKN-207ENST00000479615 SNHG28P0DPA3 235 aa17.68■□□□□ 0.42
PRKN-207ENST00000479615 ANO1Q5XXA6 986 aa17.68■□□□□ 0.42
PRKN-207ENST00000479615 LBHD1Q9BQE6 289 aaPredicted RBP17.68■□□□□ 0.42
PRKN-207ENST00000479615 A1CFQ9NQ94 594 aaKnown RBP17.68■□□□□ 0.42
PRKN-207ENST00000479615 ZHX1Q9UKY1 873 aaPredicted RBP17.68■□□□□ 0.42
PRKN-207ENST00000479615 MTMR7Q9Y216 660 aa17.68■□□□□ 0.42
PRKN-207ENST00000479615 ZNFX1Q9P2E3 1918 aaKnown RBP17.67■□□□□ 0.42
PRKN-207ENST00000479615 TAL1P17542 331 aaPredicted RBP17.67■□□□□ 0.42
PRKN-207ENST00000479615 SYN1P17600 705 aa17.67■□□□□ 0.42
PRKN-207ENST00000479615 ADCYAP1R1P41586 468 aa17.67■□□□□ 0.42
PRKN-207ENST00000479615 MAGEA10P43363 369 aaPredicted RBP17.67■□□□□ 0.42
PRKN-207ENST00000479615 ATN1P54259 1190 aaPredicted RBP17.67■□□□□ 0.42
PRKN-207ENST00000479615 RTP1P59025 263 aa17.67■□□□□ 0.42
PRKN-207ENST00000479615 ZNF543Q08ER8 600 aa17.67■□□□□ 0.42
PRKN-207ENST00000479615 CCDC174Q6PII3 467 aa17.67■□□□□ 0.42
PRKN-207ENST00000479615 ARMCX2Q7L311 632 aa17.67■□□□□ 0.42
PRKN-207ENST00000479615 CCDC144CPQ8IYA2 1237 aa17.67■□□□□ 0.42
PRKN-207ENST00000479615 PCSK9Q8NBP7 692 aaKnown RBP17.67■□□□□ 0.42
PRKN-207ENST00000479615 NUP133Q8WUM0 1156 aa17.67■□□□□ 0.42
PRKN-207ENST00000479615 ADD3Q9UEY8 706 aaKnown RBP17.67■□□□□ 0.42
PRKN-207ENST00000479615 TRIOBPQ9H2D6 2365 aa17.66■□□□□ 0.42
PRKN-207ENST00000479615 KDM4AO75164 1064 aa17.66■□□□□ 0.42
PRKN-207ENST00000479615 ADAMTS4O75173 837 aa17.66■□□□□ 0.42
PRKN-207ENST00000479615 PDE4AP27815 886 aa17.66■□□□□ 0.42
PRKN-207ENST00000479615 CST5P28325 142 aaPredicted RBP17.66■□□□□ 0.42
PRKN-207ENST00000479615 ZSCAN10Q96SZ4 725 aaPredicted RBP17.66■□□□□ 0.42
PRKN-207ENST00000479615 MPHOSPH6Q99547 160 aaKnown RBP17.66■□□□□ 0.42
PRKN-207ENST00000479615 UBE2OQ9C0C9 1292 aaKnown RBP17.66■□□□□ 0.42
PRKN-207ENST00000479615 KAT14Q9H8E8 782 aa17.66■□□□□ 0.42
PRKN-207ENST00000479615 CYP39A1Q9NYL5 469 aa17.66■□□□□ 0.42
PRKN-207ENST00000479615 NEDD4P46934 1319 aa17.66■□□□□ 0.42
PRKN-207ENST00000479615 WDR19Q8NEZ3 1342 aa17.66■□□□□ 0.42
PRKN-207ENST00000479615 PGK1P00558 417 aa17.65■□□□□ 0.42
PRKN-207ENST00000479615 GSPT1P15170 499 aaKnown RBP17.65■□□□□ 0.42
PRKN-207ENST00000479615 TRDNQ13061 729 aa17.65■□□□□ 0.42
PRKN-207ENST00000479615 TTBK2Q6IQ55 1244 aa17.65■□□□□ 0.42
PRKN-207ENST00000479615 GPR153Q6NV75 609 aa17.65■□□□□ 0.42
PRKN-207ENST00000479615 TDHQ8IZJ6 230 aa17.65■□□□□ 0.42
PRKN-207ENST00000479615 PNMA1Q8ND90 353 aa17.65■□□□□ 0.42
PRKN-207ENST00000479615 KLHDC9Q8NEP7 349 aa17.65■□□□□ 0.42
PRKN-207ENST00000479615 CHMP4CQ96CF2 233 aa17.65■□□□□ 0.42
PRKN-207ENST00000479615 UBAC1Q9BSL1 405 aa17.65■□□□□ 0.42
PRKN-207ENST00000479615 GPCPD1Q9NPB8 672 aa17.65■□□□□ 0.42
PRKN-207ENST00000479615 ZSWIM5Q9P217 1185 aa17.65■□□□□ 0.42
PRKN-207ENST00000479615 ATP11BQ9Y2G3 1177 aa17.65■□□□□ 0.42
PRKN-207ENST00000479615 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
PRKN-207ENST00000479615 B4DLN1 442 aa17.64■□□□□ 0.41
PRKN-207ENST00000479615 SLC16A2P36021 539 aa17.64■□□□□ 0.41
PRKN-207ENST00000479615 MRPL12P52815 198 aaKnown RBP17.64■□□□□ 0.41
PRKN-207ENST00000479615 NKX3-2P78367 333 aa17.64■□□□□ 0.41
PRKN-207ENST00000479615 CNTN2Q02246 1040 aa17.64■□□□□ 0.41
PRKN-207ENST00000479615 CCDC144BQ3MJ40 725 aa17.64■□□□□ 0.41
PRKN-207ENST00000479615 LRIT3Q3SXY7 679 aa17.64■□□□□ 0.41
PRKN-207ENST00000479615 FGD4Q96M96 766 aa17.64■□□□□ 0.41
PRKN-207ENST00000479615 ELP1O95163 1332 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms