RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 MNX1P50219 401 aaPredicted RBP12.37□□□□□ -0.43
SP140-210ENST00000479539 SYDE2Q5VT97 1194 aa12.37□□□□□ -0.43
SP140-210ENST00000479539 ENAHQ8N8S7 591 aaPredicted RBP12.37□□□□□ -0.43
SP140-210ENST00000479539 DDX11Q96FC9 970 aa12.37□□□□□ -0.43
SP140-210ENST00000479539 AGBL1Q96MI9 1066 aa12.37□□□□□ -0.43
SP140-210ENST00000479539 TINF2Q9BSI4 451 aa12.37□□□□□ -0.43
SP140-210ENST00000479539 ESYT1Q9BSJ8 1104 aa12.37□□□□□ -0.43
SP140-210ENST00000479539 LSG1Q9H089 658 aaKnown RBP12.37□□□□□ -0.43
SP140-210ENST00000479539 RANBP17Q9H2T7 1088 aaKnown RBP12.37□□□□□ -0.43
SP140-210ENST00000479539 NRBP1Q9UHY1 535 aa12.37□□□□□ -0.43
SP140-210ENST00000479539 FRMPD2Q68DX3 1309 aaPredicted RBP12.37□□□□□ -0.43
SP140-210ENST00000479539 MGAMO43451 1857 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 E7EWF7 191 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 MSCO60682 206 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 SLC16A2P36021 539 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 SLC4A3P48751 1232 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 TRDNQ13061 729 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 SEC23AQ15436 765 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 GPATCH4Q5T3I0 446 aaKnown RBP12.36□□□□□ -0.43
SP140-210ENST00000479539 KIAA1211Q6ZU35 1233 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 CYB5R4Q7L1T6 521 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 ANKRD35Q8N283 1001 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 MSL3Q8N5Y2 521 aaKnown RBP12.36□□□□□ -0.43
SP140-210ENST00000479539 PNMA1Q8ND90 353 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 PAWRQ96IZ0 340 aaKnown RBP12.36□□□□□ -0.43
SP140-210ENST00000479539 TRERF1Q96PN7 1200 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 UBAC1Q9BSL1 405 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 HTATIP2Q9BUP3 242 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 KAT14Q9H8E8 782 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 GPCPD1Q9NPB8 672 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 DDX20Q9UHI6 824 aaKnown RBP12.36□□□□□ -0.43
SP140-210ENST00000479539 RBM8AQ9Y5S9 174 aaKnown RBP12.36□□□□□ -0.43
SP140-210ENST00000479539 TAF6LQ9Y6J9 622 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 PLXNB2O15031 1838 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 A0A0G2JMZ2 1700 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 TNKSO95271 1327 aa12.36□□□□□ -0.43
SP140-210ENST00000479539 ICAM1P05362 532 aa12.35□□□□□ -0.43
SP140-210ENST00000479539 NEFLP07196 543 aa12.35□□□□□ -0.43
SP140-210ENST00000479539 SNAP25P60880 206 aa12.35□□□□□ -0.43
SP140-210ENST00000479539 PRAMEF19Q5SWL8 479 aa12.35□□□□□ -0.43
SP140-210ENST00000479539 CCDC174Q6PII3 467 aa12.35□□□□□ -0.43
SP140-210ENST00000479539 MAMDC4Q6UXC1 1216 aa12.35□□□□□ -0.43
SP140-210ENST00000479539 STOX1Q6ZVD7 989 aa12.35□□□□□ -0.43
SP140-210ENST00000479539 NECAB2Q7Z6G3 386 aa12.35□□□□□ -0.43
SP140-210ENST00000479539 ZNF467Q7Z7K2 595 aaPredicted RBP12.35□□□□□ -0.43
SP140-210ENST00000479539 DIS3LQ8TF46 1054 aaKnown RBP12.35□□□□□ -0.43
SP140-210ENST00000479539 ACAD9Q9H845 621 aa12.35□□□□□ -0.43
SP140-210ENST00000479539 RNF146Q9NTX7 359 aa12.35□□□□□ -0.43
SP140-210ENST00000479539 SEPT4O43236 478 aa12.34□□□□□ -0.43
SP140-210ENST00000479539 GOLGA8HP0CJ92 632 aa12.34□□□□□ -0.43
SP140-210ENST00000479539 ALAS1P13196 640 aa12.34□□□□□ -0.43
SP140-210ENST00000479539 CNGA1P29973 690 aa12.34□□□□□ -0.43
SP140-210ENST00000479539 IFIT1BQ5T764 474 aaKnown RBP12.34□□□□□ -0.43
SP140-210ENST00000479539 NCOA7Q8NI08 942 aa12.34□□□□□ -0.43
SP140-210ENST00000479539 FGD4Q96M96 766 aa12.34□□□□□ -0.43
SP140-210ENST00000479539 A1CFQ9NQ94 594 aaKnown RBP12.34□□□□□ -0.43
SP140-210ENST00000479539 HOMER2Q9NSB8 354 aa12.34□□□□□ -0.43
SP140-210ENST00000479539 PNMA2Q9UL42 364 aa12.34□□□□□ -0.43
SP140-210ENST00000479539 CCPG1Q9ULG6 757 aa12.34□□□□□ -0.43
SP140-210ENST00000479539 SYNGAP1Q96PV0 1343 aa12.34□□□□□ -0.43
SP140-210ENST00000479539 RBBP6Q7Z6E9 1792 aaKnown RBP12.33□□□□□ -0.44
SP140-210ENST00000479539 MYH8P13535 1937 aa12.33□□□□□ -0.44
SP140-210ENST00000479539 POTEB2H3BUK9 544 aa12.33□□□□□ -0.44
SP140-210ENST00000479539 SNAI1O95863 264 aaPredicted RBP12.33□□□□□ -0.44
SP140-210ENST00000479539 ZNF865P0CJ78 1059 aaPredicted RBP12.33□□□□□ -0.44
SP140-210ENST00000479539 COL6A1P12109 1028 aa12.33□□□□□ -0.44
SP140-210ENST00000479539 NECTIN1Q15223 517 aa12.33□□□□□ -0.44
SP140-210ENST00000479539 ASPRV1Q53RT3 343 aa12.33□□□□□ -0.44
SP140-210ENST00000479539 ERICH6BQ5W0A0 696 aa12.33□□□□□ -0.44
SP140-210ENST00000479539 RALYLQ86SE5 291 aaKnown RBP12.33□□□□□ -0.44
SP140-210ENST00000479539 MB21D2Q8IYB1 491 aaPredicted RBP12.33□□□□□ -0.44
SP140-210ENST00000479539 FAM133AQ8N9E0 248 aa12.33□□□□□ -0.44
SP140-210ENST00000479539 DPF3Q92784 378 aa12.33□□□□□ -0.44
SP140-210ENST00000479539 UBA5Q9GZZ9 404 aa12.33□□□□□ -0.44
SP140-210ENST00000479539 CYP39A1Q9NYL5 469 aa12.33□□□□□ -0.44
SP140-210ENST00000479539 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
SP140-210ENST00000479539 IFIT3O14879 490 aaKnown RBP12.32□□□□□ -0.44
SP140-210ENST00000479539 SLC27A2O14975 620 aa12.32□□□□□ -0.44
SP140-210ENST00000479539 CDC45O75419 566 aa12.32□□□□□ -0.44
SP140-210ENST00000479539 TAL1P17542 331 aaPredicted RBP12.32□□□□□ -0.44
SP140-210ENST00000479539 CNTN2Q02246 1040 aa12.32□□□□□ -0.44
SP140-210ENST00000479539 MUM1L1Q5H9M0 696 aa12.32□□□□□ -0.44
SP140-210ENST00000479539 IGDCC4Q8TDY8 1250 aa12.32□□□□□ -0.44
SP140-210ENST00000479539 MTA3Q9BTC8 594 aa12.32□□□□□ -0.44
SP140-210ENST00000479539 C11orf49Q9H6J7 331 aa12.32□□□□□ -0.44
SP140-210ENST00000479539 ANO2Q9NQ90 1003 aa12.32□□□□□ -0.44
SP140-210ENST00000479539 CNPY2Q9Y2B0 182 aa12.32□□□□□ -0.44
SP140-210ENST00000479539 PFASO15067 1338 aa12.32□□□□□ -0.44
SP140-210ENST00000479539 CEP290O15078 2479 aa12.31□□□□□ -0.44
SP140-210ENST00000479539 ERICH2A1L162 156 aa12.31□□□□□ -0.44
SP140-210ENST00000479539 SOWAHBA6NEL2 793 aa12.31□□□□□ -0.44
SP140-210ENST00000479539 PARP1P09874 1014 aaKnown RBP12.31□□□□□ -0.44
SP140-210ENST00000479539 ANTXR2P58335 489 aa12.31□□□□□ -0.44
SP140-210ENST00000479539 CREB3L3Q68CJ9 461 aa12.31□□□□□ -0.44
SP140-210ENST00000479539 CASC1Q6TDU7 716 aa12.31□□□□□ -0.44
SP140-210ENST00000479539 ADGRF4Q8IZF3 695 aa12.31□□□□□ -0.44
SP140-210ENST00000479539 ARRDC4Q8NCT1 418 aa12.31□□□□□ -0.44
SP140-210ENST00000479539 CLEC4DQ8WXI8 215 aa12.31□□□□□ -0.44
SP140-210ENST00000479539 CPVLQ9H3G5 476 aa12.31□□□□□ -0.44
SP140-210ENST00000479539 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms