RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 ECI1P42126 302 aa9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 RNF4P78317 190 aa9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 SOX4Q06945 474 aaPredicted RBP9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 SNW1Q13573 536 aaKnown RBP9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 MLC1Q15049 377 aa9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 FAM102BQ5T8I3 360 aa9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 ZCCHC8Q6NZY4 707 aaKnown RBP9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 KCNT2Q6UVM3 1135 aa9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 USP53Q70EK8 1073 aa9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 UBE2R2Q712K3 238 aaPredicted RBP9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 DYMQ7RTS9 669 aa9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 BTBD6Q96KE9 485 aa9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 ZNF180Q9UJW8 692 aa9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 FHOD1Q9Y613 1164 aa9.66□□□□□ -0.86
GAPVD1-217ENST00000479511 E2F8A0AVK6 867 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 PLIN1O60240 522 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 VAMP4O75379 141 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 PRKD3O94806 890 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 LRIG2O94898 1065 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 ABLIM3O94929 683 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 SCG5P05408 212 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 GRB10Q13322 594 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 NBPF9Q3BBW0 867 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 NOL9Q5SY16 702 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 NUTM2GQ5VZR2 741 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 NXNQ6DKJ4 435 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 NXPE1Q8N323 547 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 FIBCD1Q8N539 461 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 SMG8Q8ND04 991 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 SYTL5Q8TDW5 730 aaPredicted RBP9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 EDARADDQ8WWZ3 215 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 WNK4Q96J92 1243 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 COL25A1Q9BXS0 654 aaPredicted RBP9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 RHOBTB2Q9BYZ6 727 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 SUGCTQ9HAC7 445 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 SSU72Q9NP77 194 aaKnown RBP9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 GPR55Q9Y2T6 319 aaPredicted RBP9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 PCDHB12Q9Y5F1 795 aa9.65□□□□□ -0.86
GAPVD1-217ENST00000479511 MYL1P05976 194 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 PYGMP11217 842 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 STYK1Q6J9G0 422 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 CDH24Q86UP0 819 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 MFSD2AQ8NA29 543 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 KREMEN2Q8NCW0 462 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 JPH3Q8WXH2 748 aaPredicted RBP9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 CCDC140Q96MF4 163 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 ZDHHC15Q96MV8 337 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 CAMKK2Q96RR4 588 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 ORAI3Q9BRQ5 295 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 PRDM14Q9GZV8 571 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 PIDD1Q9HB75 910 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 FAM105AQ9NUU6 356 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 SAMD15Q9P1V8 674 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 APOBEC2Q9Y235 224 aaKnown RBP9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 ACTL7BQ9Y614 415 aa9.64□□□□□ -0.87
GAPVD1-217ENST00000479511 GLRX3O76003 335 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-217ENST00000479511 ZSCAN20P17040 1043 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-217ENST00000479511 ADCYAP1R1P41586 468 aa9.63□□□□□ -0.87
GAPVD1-217ENST00000479511 ASPAP45381 313 aa9.63□□□□□ -0.87
GAPVD1-217ENST00000479511 SCNN1BP51168 640 aa9.63□□□□□ -0.87
GAPVD1-217ENST00000479511 ABCB5Q2M3G0 1257 aa9.63□□□□□ -0.87
GAPVD1-217ENST00000479511 SMYD4Q8IYR2 804 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-217ENST00000479511 CBARPQ8N350 705 aaPredicted RBP9.63□□□□□ -0.87
GAPVD1-217ENST00000479511 MAGEB6Q8N7X4 407 aa9.63□□□□□ -0.87
GAPVD1-217ENST00000479511 GALNT6Q8NCL4 622 aa9.63□□□□□ -0.87
GAPVD1-217ENST00000479511 MPHOSPH6Q99547 160 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-217ENST00000479511 CYP26B1Q9NR63 512 aa9.63□□□□□ -0.87
GAPVD1-217ENST00000479511 DIS3Q9Y2L1 958 aaKnown RBP9.63□□□□□ -0.87
GAPVD1-217ENST00000479511 B4E1Z4 1266 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 CBX4O00257 560 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 CREB3O43889 395 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 FBXO21O94952 628 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 TIAF1O95411 115 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 LCE2AQ5TA79 106 aaPredicted RBP9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 PPP4R4Q6NUP7 873 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 LETMD1Q6P1Q0 360 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 TSHZ1Q6ZSZ6 1077 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 ACAD11Q709F0 780 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 ANKLE2Q86XL3 938 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 C2CD4AQ8NCU7 369 aaPredicted RBP9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 FBXL18Q96ME1 805 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 MIPEPQ99797 713 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 CYP4F12Q9HCS2 524 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 GFOD1Q9NXC2 390 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 SPEF1Q9Y4P9 236 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 PCDHA8Q9Y5H6 950 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 COMMD10Q9Y6G5 202 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 SMARCA2P51531 1590 aa9.62□□□□□ -0.87
GAPVD1-217ENST00000479511 ARHGEF11O15085 1522 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 SHISA8B8ZZ34 492 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 LRRN2O75325 713 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 RFPL1O75677 317 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 SLITRK5O94991 958 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 GUCY1A3Q02108 690 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 HLTFQ14527 1009 aaKnown RBP eCLIP9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 DPY19L1Q2PZI1 675 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 SLC4A10Q6U841 1118 aa9.61□□□□□ -0.87
GAPVD1-217ENST00000479511 KSR2Q6VAB6 950 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms