RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 ZKSCAN3Q9BRR0 538 aa10.69□□□□□ -0.7
CMTM1-208ENST00000479381 GPCPD1Q9NPB8 672 aa10.69□□□□□ -0.7
CMTM1-208ENST00000479381 PAK6Q9NQU5 681 aaPredicted RBP10.69□□□□□ -0.7
CMTM1-208ENST00000479381 ANAPC4Q9UJX5 808 aa10.69□□□□□ -0.7
CMTM1-208ENST00000479381 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.69□□□□□ -0.7
CMTM1-208ENST00000479381 PARP14Q460N5 1801 aa10.68□□□□□ -0.7
CMTM1-208ENST00000479381 ORC4O43929 436 aa10.68□□□□□ -0.7
CMTM1-208ENST00000479381 MSCO60682 206 aa10.68□□□□□ -0.7
CMTM1-208ENST00000479381 TOP1P11387 765 aaKnown RBP10.68□□□□□ -0.7
CMTM1-208ENST00000479381 PCP11498 1178 aaKnown RBP10.68□□□□□ -0.7
CMTM1-208ENST00000479381 ALAS1P13196 640 aa10.68□□□□□ -0.7
CMTM1-208ENST00000479381 CAPN2P17655 700 aa10.68□□□□□ -0.7
CMTM1-208ENST00000479381 KIAA1211Q6ZU35 1233 aa10.68□□□□□ -0.7
CMTM1-208ENST00000479381 STAG1Q8WVM7 1258 aa10.68□□□□□ -0.7
CMTM1-208ENST00000479381 UBAC1Q9BSL1 405 aa10.68□□□□□ -0.7
CMTM1-208ENST00000479381 NBPF3Q9H094 633 aa10.68□□□□□ -0.7
CMTM1-208ENST00000479381 C11orf49Q9H6J7 331 aa10.68□□□□□ -0.7
CMTM1-208ENST00000479381 KAT14Q9H8E8 782 aa10.68□□□□□ -0.7
CMTM1-208ENST00000479381 ZHX1Q9UKY1 873 aaPredicted RBP10.68□□□□□ -0.7
CMTM1-208ENST00000479381 SYNPO2Q9UMS6 1093 aa10.68□□□□□ -0.7
CMTM1-208ENST00000479381 CNPY2Q9Y2B0 182 aa10.68□□□□□ -0.7
CMTM1-208ENST00000479381 ZMYM6O95789 1325 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 RAD50Q92878 1312 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 B4E1Z4 1266 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 KDM4AO75164 1064 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 FDX1P10109 184 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 GSPT1P15170 499 aaKnown RBP10.67□□□□□ -0.7
CMTM1-208ENST00000479381 SNAP25P60880 206 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 CCDC178Q5BJE1 867 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 POTEEQ6S8J3 1075 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 RALYLQ86SE5 291 aaKnown RBP10.67□□□□□ -0.7
CMTM1-208ENST00000479381 TBC1D10CQ8IV04 446 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 C7orf61Q8IZ16 206 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 ANKLE1Q8NAG6 615 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 DIS3LQ8TF46 1054 aaKnown RBP10.67□□□□□ -0.7
CMTM1-208ENST00000479381 DCAF4Q8WV16 495 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 MKL1Q969V6 931 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 CCDC136Q96JN2 1154 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 DSCC1Q9BVC3 393 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 KRT23Q9C075 422 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 FLRT1Q9NZU1 646 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 FBXO40Q9UH90 709 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 DDX20Q9UHI6 824 aaKnown RBP10.67□□□□□ -0.7
CMTM1-208ENST00000479381 CCPG1Q9ULG6 757 aa10.67□□□□□ -0.7
CMTM1-208ENST00000479381 RLFQ13129 1914 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 ZNFX1Q9P2E3 1918 aaKnown RBP10.66□□□□□ -0.7
CMTM1-208ENST00000479381 NEDD4P46934 1319 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 ERICH2A1L162 156 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 KBTBD13C9JR72 458 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 FOXP2O15409 715 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 COBLO75128 1261 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 OLFML2BQ68BL8 750 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 RCSD1Q6JBY9 416 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 CASC1Q6TDU7 716 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 NSMFQ6X4W1 530 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 NOL8Q76FK4 1167 aaKnown RBP10.66□□□□□ -0.7
CMTM1-208ENST00000479381 ABRAQ8N0Z2 381 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 USP6NLQ92738 828 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 GMCL1Q96IK5 515 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 MAML3Q96JK9 1138 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 TMEM47Q9BQJ4 181 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 ACAD9Q9H845 621 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 CNNM2Q9H8M5 875 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 RNF146Q9NTX7 359 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 ZNF214Q9UL59 606 aaPredicted RBP10.66□□□□□ -0.7
CMTM1-208ENST00000479381 PLXNA1Q9UIW2 1896 aa10.66□□□□□ -0.7
CMTM1-208ENST00000479381 LAMA4Q16363 1823 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 ZNF236Q9UL36 1845 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 GTPBP6O43824 516 aaPredicted RBP10.65□□□□□ -0.7
CMTM1-208ENST00000479381 HOXC6P09630 235 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 RARBP10826 455 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 SLC16A2P36021 539 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 PRAMEF19Q5SWL8 479 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 MAP3K21Q5TCX8 1036 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 SYDE2Q5VT97 1194 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 TMEM92Q6UXU6 159 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 CENPQQ7L2Z9 268 aaPredicted RBP10.65□□□□□ -0.7
CMTM1-208ENST00000479381 RASGRP2Q7LDG7 609 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 CHST13Q8NET6 341 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 TRERF1Q96PN7 1200 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 SENP6Q9GZR1 1112 aaPredicted RBP10.65□□□□□ -0.7
CMTM1-208ENST00000479381 SLC38A10Q9HBR0 1119 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 IL17RBQ9NRM6 502 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 PRR12Q9ULL5 1215 aa10.65□□□□□ -0.7
CMTM1-208ENST00000479381 CENPFP49454 3210 aa10.65□□□□□ -0.71
CMTM1-208ENST00000479381 H0YGN5 161 aa10.64□□□□□ -0.71
CMTM1-208ENST00000479381 ST18O60284 1047 aa10.64□□□□□ -0.71
CMTM1-208ENST00000479381 OAZ1P54368 228 aa10.64□□□□□ -0.71
CMTM1-208ENST00000479381 SART3Q15020 963 aaKnown RBP10.64□□□□□ -0.71
CMTM1-208ENST00000479381 GJC2Q5T442 439 aaPredicted RBP10.64□□□□□ -0.71
CMTM1-208ENST00000479381 IFIT1BQ5T764 474 aaKnown RBP10.64□□□□□ -0.71
CMTM1-208ENST00000479381 TTBK2Q6IQ55 1244 aa10.64□□□□□ -0.71
CMTM1-208ENST00000479381 ARRDC4Q8NCT1 418 aa10.64□□□□□ -0.71
CMTM1-208ENST00000479381 REPS2Q8NFH8 660 aa10.64□□□□□ -0.71
CMTM1-208ENST00000479381 AGBL1Q96MI9 1066 aa10.64□□□□□ -0.71
CMTM1-208ENST00000479381 TINF2Q9BSI4 451 aa10.64□□□□□ -0.71
CMTM1-208ENST00000479381 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
CMTM1-208ENST00000479381 PRKAG2Q9UGJ0 569 aa10.64□□□□□ -0.71
CMTM1-208ENST00000479381 OGDHLQ9ULD0 1010 aa10.64□□□□□ -0.71
CMTM1-208ENST00000479381 ZMYND8Q9ULU4 1186 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms