RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 ERCC3P19447 782 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 CTGFP29279 349 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 APOBRQ0VD83 1088 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 TRAF1Q13077 416 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 SNRNP48Q6IEG0 339 aaKnown RBP16.25■□□□□ 0.19
PCIF1-202ENST00000479348 GPR142Q7Z601 462 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 MICU3Q86XE3 530 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 ABRAQ8N0Z2 381 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 CHST13Q8NET6 341 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 ZNF274Q96GC6 653 aaPredicted RBP16.25■□□□□ 0.19
PCIF1-202ENST00000479348 SPZ1Q9BXG8 430 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 JMJD4Q9H9V9 463 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 SRRDQ9UH36 339 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 FBXO40Q9UH90 709 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 TRIM17Q9Y577 477 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 IVNS1ABPQ9Y6Y0 642 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 ZNF536O15090 1300 aa16.25■□□□□ 0.19
PCIF1-202ENST00000479348 DHX16O60231 1041 aaKnown RBP16.24■□□□□ 0.19
PCIF1-202ENST00000479348 NEK4P51957 841 aa16.24■□□□□ 0.19
PCIF1-202ENST00000479348 RTN1Q16799 776 aa16.24■□□□□ 0.19
PCIF1-202ENST00000479348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.24■□□□□ 0.19
PCIF1-202ENST00000479348 NCAPG2Q86XI2 1143 aa16.24■□□□□ 0.19
PCIF1-202ENST00000479348 SOCS4Q8WXH5 440 aa16.24■□□□□ 0.19
PCIF1-202ENST00000479348 MTMR8Q96EF0 704 aa16.24■□□□□ 0.19
PCIF1-202ENST00000479348 TBC1D32Q96NH3 1257 aa16.24■□□□□ 0.19
PCIF1-202ENST00000479348 COL11A1P12107 1806 aaPredicted RBP16.24■□□□□ 0.19
PCIF1-202ENST00000479348 SLC15A5A6NIM6 579 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 GOLGA8AA7E2F4 631 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 GOLGA8BA8MQT2 603 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 FCER1AP12319 257 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 PTPREP23469 700 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 CAP1Q01518 475 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 CDC37Q16543 378 aaPredicted RBP16.23■□□□□ 0.19
PCIF1-202ENST00000479348 WDR78Q5VTH9 848 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 CCDC174Q6PII3 467 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 KIF2CQ99661 725 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 NUDT12Q9BQG2 462 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 MAF1Q9H063 256 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 CPVLQ9H3G5 476 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 CCPG1Q9ULG6 757 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 NAP1L2Q9ULW6 460 aaPredicted RBP16.23■□□□□ 0.19
PCIF1-202ENST00000479348 NID2Q14112 1375 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 MGAMO43451 1857 aa16.23■□□□□ 0.19
PCIF1-202ENST00000479348 ZBTB5O15062 677 aa16.22■□□□□ 0.19
PCIF1-202ENST00000479348 CYTH3O43739 400 aa16.22■□□□□ 0.19
PCIF1-202ENST00000479348 RXRAP19793 462 aa16.22■□□□□ 0.19
PCIF1-202ENST00000479348 PDIA3P30101 505 aaKnown RBP16.22■□□□□ 0.19
PCIF1-202ENST00000479348 METAP2P50579 478 aaKnown RBP eCLIP16.22■□□□□ 0.19
PCIF1-202ENST00000479348 SNAP25P60880 206 aa16.22■□□□□ 0.19
PCIF1-202ENST00000479348 IRF5Q13568 498 aa16.22■□□□□ 0.19
PCIF1-202ENST00000479348 RABEP1Q15276 862 aa16.22■□□□□ 0.19
PCIF1-202ENST00000479348 FBXO46Q6PJ61 603 aaPredicted RBP16.22■□□□□ 0.19
PCIF1-202ENST00000479348 TMTC3Q6ZXV5 915 aa16.22■□□□□ 0.19
PCIF1-202ENST00000479348 CCDC144CPQ8IYA2 1237 aa16.22■□□□□ 0.19
PCIF1-202ENST00000479348 AGBL1Q96MI9 1066 aa16.22■□□□□ 0.19
PCIF1-202ENST00000479348 VAT1LQ9HCJ6 419 aa16.22■□□□□ 0.19
PCIF1-202ENST00000479348 GJD2Q9UKL4 321 aa16.22■□□□□ 0.19
PCIF1-202ENST00000479348 PTPN22Q9Y2R2 807 aa16.22■□□□□ 0.19
PCIF1-202ENST00000479348 RIPK3Q9Y572 518 aa16.22■□□□□ 0.19
PCIF1-202ENST00000479348 PNMA6FA0A0J9YX94 578 aa16.21■□□□□ 0.19
PCIF1-202ENST00000479348 ECM2O94769 699 aaPredicted RBP16.21■□□□□ 0.19
PCIF1-202ENST00000479348 GRB14Q14449 540 aa16.21■□□□□ 0.19
PCIF1-202ENST00000479348 KCTD2Q14681 263 aa16.21■□□□□ 0.19
PCIF1-202ENST00000479348 QRICH1Q2TAL8 776 aa16.21■□□□□ 0.19
PCIF1-202ENST00000479348 MORN1Q5T089 497 aa16.21■□□□□ 0.19
PCIF1-202ENST00000479348 NBPF11Q86T75 865 aa16.21■□□□□ 0.19
PCIF1-202ENST00000479348 FBXO11Q86XK2 927 aa16.21■□□□□ 0.19
PCIF1-202ENST00000479348 SRBD1Q8N5C6 995 aaKnown RBP16.21■□□□□ 0.19
PCIF1-202ENST00000479348 USP6NLQ92738 828 aa16.21■□□□□ 0.19
PCIF1-202ENST00000479348 RRP36Q96EU6 259 aaKnown RBP16.21■□□□□ 0.19
PCIF1-202ENST00000479348 TRERF1Q96PN7 1200 aa16.21■□□□□ 0.19
PCIF1-202ENST00000479348 ACAD9Q9H845 621 aa16.21■□□□□ 0.19
PCIF1-202ENST00000479348 SLC5A4Q9NY91 659 aa16.21■□□□□ 0.19
PCIF1-202ENST00000479348 HPS5Q9UPZ3 1129 aa16.21■□□□□ 0.19
PCIF1-202ENST00000479348 PLEKHA8P1O95397 391 aa16.2■□□□□ 0.18
PCIF1-202ENST00000479348 XRCC5P13010 732 aaKnown RBP16.2■□□□□ 0.18
PCIF1-202ENST00000479348 ALAS1P13196 640 aa16.2■□□□□ 0.18
PCIF1-202ENST00000479348 SLC4A3P48751 1232 aa16.2■□□□□ 0.18
PCIF1-202ENST00000479348 FLT3LGP49771 235 aa16.2■□□□□ 0.18
PCIF1-202ENST00000479348 AK2P54819 239 aa16.2■□□□□ 0.18
PCIF1-202ENST00000479348 PRKCZQ05513 592 aa16.2■□□□□ 0.18
PCIF1-202ENST00000479348 MAP2K5Q13163 448 aa16.2■□□□□ 0.18
PCIF1-202ENST00000479348 SLC35G1Q2M3R5 365 aa16.2■□□□□ 0.18
PCIF1-202ENST00000479348 RAB11FIP4Q86YS3 637 aa16.2■□□□□ 0.18
PCIF1-202ENST00000479348 TRMT44Q8IYL2 757 aaKnown RBP16.2■□□□□ 0.18
PCIF1-202ENST00000479348 MMP19Q99542 508 aa16.2■□□□□ 0.18
PCIF1-202ENST00000479348 AMNQ9BXJ7 453 aa16.2■□□□□ 0.18
PCIF1-202ENST00000479348 RNF146Q9NTX7 359 aa16.2■□□□□ 0.18
PCIF1-202ENST00000479348 FAM217BQ9NTX9 383 aaPredicted RBP16.2■□□□□ 0.18
PCIF1-202ENST00000479348 ABCB11O95342 1321 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 HOXC6P09630 235 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 ADORA2AP29274 412 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 CDC27P30260 824 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 RGS2P41220 211 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 COL13A1Q5TAT6 717 aaPredicted RBP16.19■□□□□ 0.18
PCIF1-202ENST00000479348 RAET1EQ8TD07 263 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 PXYLP1Q8TE99 480 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 PIGSQ96S52 555 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 SEC63Q9UGP8 760 aaKnown RBP16.19■□□□□ 0.18
PCIF1-202ENST00000479348 GABRQQ9UN88 632 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms