RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 RNF180Q86T96 592 aa18.68■□□□□ 0.58
GARNL3-215ENST00000478702 MTMR4Q9NYA4 1195 aa18.68■□□□□ 0.58
GARNL3-215ENST00000478702 SYNPO2Q9UMS6 1093 aa18.68■□□□□ 0.58
GARNL3-215ENST00000478702 ORC4O43929 436 aa18.67■□□□□ 0.58
GARNL3-215ENST00000478702 FGRP09769 529 aa18.67■□□□□ 0.58
GARNL3-215ENST00000478702 AKR1A1P14550 325 aa18.67■□□□□ 0.58
GARNL3-215ENST00000478702 PQBP1O60828 265 aaKnown RBP18.66■□□□□ 0.58
GARNL3-215ENST00000478702 TTLL1O95922 423 aa18.66■□□□□ 0.58
GARNL3-215ENST00000478702 NDUFB10O96000 172 aa18.66■□□□□ 0.58
GARNL3-215ENST00000478702 TFAP4Q01664 338 aa18.66■□□□□ 0.58
GARNL3-215ENST00000478702 RNPC3Q96LT9 517 aaKnown RBP18.66■□□□□ 0.58
GARNL3-215ENST00000478702 RIPK3Q9Y572 518 aa18.66■□□□□ 0.58
GARNL3-215ENST00000478702 RAD50Q92878 1312 aa18.66■□□□□ 0.58
GARNL3-215ENST00000478702 SYNRGQ9UMZ2 1314 aa18.66■□□□□ 0.58
GARNL3-215ENST00000478702 TSPY2A6NKD2 308 aa18.65■□□□□ 0.58
GARNL3-215ENST00000478702 SNAI1O95863 264 aaPredicted RBP18.65■□□□□ 0.58
GARNL3-215ENST00000478702 RAG1P15918 1043 aa18.65■□□□□ 0.58
GARNL3-215ENST00000478702 FAAP100Q0VG06 881 aa18.65■□□□□ 0.58
GARNL3-215ENST00000478702 CCSAPQ6IQ19 270 aaPredicted RBP18.65■□□□□ 0.58
GARNL3-215ENST00000478702 CENPQQ7L2Z9 268 aaPredicted RBP18.65■□□□□ 0.58
GARNL3-215ENST00000478702 ANKRD33Q7Z3H0 272 aa18.65■□□□□ 0.58
GARNL3-215ENST00000478702 LRRC47Q8N1G4 583 aaKnown RBP18.65■□□□□ 0.58
GARNL3-215ENST00000478702 KLHDC9Q8NEP7 349 aa18.65■□□□□ 0.58
GARNL3-215ENST00000478702 MKL1Q969V6 931 aa18.65■□□□□ 0.58
GARNL3-215ENST00000478702 NUP88Q99567 741 aaPredicted RBP18.65■□□□□ 0.58
GARNL3-215ENST00000478702 IL25Q9H293 177 aa18.65■□□□□ 0.58
GARNL3-215ENST00000478702 INCENPQ9NQS7 918 aa18.65■□□□□ 0.58
GARNL3-215ENST00000478702 CLIP2Q9UDT6 1046 aa18.65■□□□□ 0.58
GARNL3-215ENST00000478702 LRRC37A2A6NM11 1700 aa18.65■□□□□ 0.58
GARNL3-215ENST00000478702 DNAJC25-GNG10A0A024R161 153 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 TMEM265A0A087WTH1 108 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 MYADML2A6NDP7 307 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 RAD21O60216 631 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 FOSL2P15408 326 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 COPB2P35606 906 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 ACLYP53396 1101 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 HAND2P61296 217 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 IRX5P78411 483 aaPredicted RBP18.64■□□□□ 0.57
GARNL3-215ENST00000478702 PPP4R3BQ5MIZ7 849 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 TBC1D10CQ8IV04 446 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 GMCL1P1Q8NEA9 526 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 TOX2Q96NM4 488 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 TSEN34Q9BSV6 310 aaKnown RBP18.64■□□□□ 0.57
GARNL3-215ENST00000478702 DSCC1Q9BVC3 393 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 TMEM39AQ9NV64 488 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 LCTP09848 1927 aa18.64■□□□□ 0.57
GARNL3-215ENST00000478702 TTC28Q96AY4 2481 aa18.63■□□□□ 0.57
GARNL3-215ENST00000478702 F5H6K3 240 aa18.63■□□□□ 0.57
GARNL3-215ENST00000478702 PCP11498 1178 aaKnown RBP18.63■□□□□ 0.57
GARNL3-215ENST00000478702 FPGSQ05932 587 aa18.63■□□□□ 0.57
GARNL3-215ENST00000478702 KLRC3Q07444 240 aa18.63■□□□□ 0.57
GARNL3-215ENST00000478702 MAMDC4Q6UXC1 1216 aa18.63■□□□□ 0.57
GARNL3-215ENST00000478702 STAG1Q8WVM7 1258 aa18.63■□□□□ 0.57
GARNL3-215ENST00000478702 SLF1Q9BQI6 1058 aa18.63■□□□□ 0.57
GARNL3-215ENST00000478702 STARD7Q9NQZ5 370 aa18.63■□□□□ 0.57
GARNL3-215ENST00000478702 CNPY2Q9Y2B0 182 aa18.63■□□□□ 0.57
GARNL3-215ENST00000478702 ADCY6O43306 1168 aa18.62■□□□□ 0.57
GARNL3-215ENST00000478702 RANBP6O60518 1105 aaKnown RBP18.62■□□□□ 0.57
GARNL3-215ENST00000478702 GRIN2CQ14957 1233 aa18.62■□□□□ 0.57
GARNL3-215ENST00000478702 AKNAD1Q5T1N1 836 aa18.62■□□□□ 0.57
GARNL3-215ENST00000478702 SNRNP48Q6IEG0 339 aaKnown RBP18.62■□□□□ 0.57
GARNL3-215ENST00000478702 MSL3Q8N5Y2 521 aaKnown RBP18.62■□□□□ 0.57
GARNL3-215ENST00000478702 FGD4Q96M96 766 aa18.62■□□□□ 0.57
GARNL3-215ENST00000478702 TEX13BQ9BXU2 312 aa18.62■□□□□ 0.57
GARNL3-215ENST00000478702 IL17RBQ9NRM6 502 aa18.62■□□□□ 0.57
GARNL3-215ENST00000478702 SYNGAP1Q96PV0 1343 aa18.62■□□□□ 0.57
GARNL3-215ENST00000478702 NEDD4P46934 1319 aa18.61■□□□□ 0.57
GARNL3-215ENST00000478702 MOXD2PA6NHM9 499 aa18.61■□□□□ 0.57
GARNL3-215ENST00000478702 NMT2O60551 498 aa18.61■□□□□ 0.57
GARNL3-215ENST00000478702 CHMLP26374 656 aa18.61■□□□□ 0.57
GARNL3-215ENST00000478702 NOVP48745 357 aa18.61■□□□□ 0.57
GARNL3-215ENST00000478702 KCNA10Q16322 511 aa18.61■□□□□ 0.57
GARNL3-215ENST00000478702 USP38Q8NB14 1042 aa18.61■□□□□ 0.57
GARNL3-215ENST00000478702 RNF41Q9H4P4 317 aaPredicted RBP18.61■□□□□ 0.57
GARNL3-215ENST00000478702 TOMM22Q9NS69 142 aa18.61■□□□□ 0.57
GARNL3-215ENST00000478702 TBX21Q9UL17 535 aa18.61■□□□□ 0.57
GARNL3-215ENST00000478702 FAM184BQ9ULE4 1060 aa18.61■□□□□ 0.57
GARNL3-215ENST00000478702 MUC3AQ02505 3323 aa18.6■□□□□ 0.57
GARNL3-215ENST00000478702 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.6■□□□□ 0.57
GARNL3-215ENST00000478702 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.6■□□□□ 0.57
GARNL3-215ENST00000478702 ATP2A1O14983 1001 aa18.6■□□□□ 0.57
GARNL3-215ENST00000478702 TIMP1P01033 207 aa18.6■□□□□ 0.57
GARNL3-215ENST00000478702 DNAJB2P25686 324 aa18.6■□□□□ 0.57
GARNL3-215ENST00000478702 RRP12Q5JTH9 1297 aaKnown RBP18.6■□□□□ 0.57
GARNL3-215ENST00000478702 NUP133Q8WUM0 1156 aa18.6■□□□□ 0.57
GARNL3-215ENST00000478702 DDX11Q96FC9 970 aa18.6■□□□□ 0.57
GARNL3-215ENST00000478702 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.6■□□□□ 0.57
GARNL3-215ENST00000478702 ZHX1Q9UKY1 873 aaPredicted RBP18.6■□□□□ 0.57
GARNL3-215ENST00000478702 STX8Q9UNK0 236 aa18.6■□□□□ 0.57
GARNL3-215ENST00000478702 DCDC2CA8MYV0 355 aa18.59■□□□□ 0.57
GARNL3-215ENST00000478702 ZNF213O14771 459 aa18.59■□□□□ 0.57
GARNL3-215ENST00000478702 DUSP11O75319 330 aaKnown RBP18.59■□□□□ 0.57
GARNL3-215ENST00000478702 CST5P28325 142 aaPredicted RBP18.59■□□□□ 0.57
GARNL3-215ENST00000478702 CDK7P50613 346 aa18.59■□□□□ 0.57
GARNL3-215ENST00000478702 SLFN13Q68D06 897 aa18.59■□□□□ 0.57
GARNL3-215ENST00000478702 MFSD6Q6ZSS7 791 aa18.59■□□□□ 0.57
GARNL3-215ENST00000478702 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.59■□□□□ 0.57
GARNL3-215ENST00000478702 C16orf59Q7L2K0 433 aa18.59■□□□□ 0.57
GARNL3-215ENST00000478702 ZNF467Q7Z7K2 595 aaPredicted RBP18.59■□□□□ 0.57
GARNL3-215ENST00000478702 CPXCR1Q8N123 301 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms