RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 PLIN4Q96Q06 1357 aa13.97□□□□□ -0.17
CPSF7-211ENST00000477890 TMEM232C9JQI7 657 aa13.97□□□□□ -0.17
CPSF7-211ENST00000477890 ADCY6O43306 1168 aa13.97□□□□□ -0.17
CPSF7-211ENST00000477890 STAT2P52630 851 aa13.97□□□□□ -0.17
CPSF7-211ENST00000477890 IRX5P78411 483 aaPredicted RBP13.97□□□□□ -0.17
CPSF7-211ENST00000477890 TFAP4Q01664 338 aa13.97□□□□□ -0.17
CPSF7-211ENST00000477890 CCDC144BQ3MJ40 725 aa13.97□□□□□ -0.17
CPSF7-211ENST00000477890 CCSAPQ6IQ19 270 aaPredicted RBP13.97□□□□□ -0.17
CPSF7-211ENST00000477890 ARMCX2Q7L311 632 aa13.97□□□□□ -0.17
CPSF7-211ENST00000477890 PI4K2BQ8TCG2 481 aa13.97□□□□□ -0.17
CPSF7-211ENST00000477890 OTUD7AQ8TE49 926 aaPredicted RBP13.97□□□□□ -0.17
CPSF7-211ENST00000477890 CHMP4CQ96CF2 233 aa13.97□□□□□ -0.17
CPSF7-211ENST00000477890 FGD4Q96M96 766 aa13.97□□□□□ -0.17
CPSF7-211ENST00000477890 GLT1D1Q96MS3 346 aa13.97□□□□□ -0.17
CPSF7-211ENST00000477890 SPC25Q9HBM1 224 aa13.97□□□□□ -0.17
CPSF7-211ENST00000477890 CUL9Q8IWT3 2517 aa13.97□□□□□ -0.17
CPSF7-211ENST00000477890 A0A0C4DFX4 3053 aa13.96□□□□□ -0.17
CPSF7-211ENST00000477890 FDX1P10109 184 aa13.96□□□□□ -0.17
CPSF7-211ENST00000477890 CST5P28325 142 aaPredicted RBP13.96□□□□□ -0.17
CPSF7-211ENST00000477890 IKQ13123 557 aaPredicted RBP13.96□□□□□ -0.17
CPSF7-211ENST00000477890 ZMYM1Q5SVZ6 1142 aa13.96□□□□□ -0.17
CPSF7-211ENST00000477890 CCDC144CPQ8IYA2 1237 aa13.96□□□□□ -0.17
CPSF7-211ENST00000477890 PCSK9Q8NBP7 692 aaKnown RBP13.96□□□□□ -0.17
CPSF7-211ENST00000477890 MYLIPQ8WY64 445 aa13.96□□□□□ -0.17
CPSF7-211ENST00000477890 VTI1AQ96AJ9 217 aa13.96□□□□□ -0.17
CPSF7-211ENST00000477890 TTYH1Q9H313 450 aaPredicted RBP13.96□□□□□ -0.17
CPSF7-211ENST00000477890 ACAD9Q9H845 621 aa13.96□□□□□ -0.17
CPSF7-211ENST00000477890 ELP1O95163 1332 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 MROH7Q68CQ1 1323 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 ASGR1P07306 291 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 MCCP23508 829 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 SLC1A4P43007 532 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 GJA9P57773 515 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 CNTN2Q02246 1040 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 GNASQ5JWF2 1037 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 CCDC129Q6ZRS4 1044 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 FAM160B2Q86V87 743 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 MAFAQ8NHW3 353 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-211ENST00000477890 CHURC1Q8WUH1 139 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 AGBL1Q96MI9 1066 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 COL25A1Q9BXS0 654 aaPredicted RBP13.95□□□□□ -0.18
CPSF7-211ENST00000477890 UPF3AQ9H1J1 476 aaKnown RBP13.95□□□□□ -0.18
CPSF7-211ENST00000477890 RNF146Q9NTX7 359 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 STX8Q9UNK0 236 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 PCDHB15Q9Y5E8 787 aa13.95□□□□□ -0.18
CPSF7-211ENST00000477890 A0A0U1RQG5 324 aaPredicted RBP13.94□□□□□ -0.18
CPSF7-211ENST00000477890 TSPY2A6NKD2 308 aa13.94□□□□□ -0.18
CPSF7-211ENST00000477890 TIMP1P01033 207 aa13.94□□□□□ -0.18
CPSF7-211ENST00000477890 MX1P20591 662 aa13.94□□□□□ -0.18
CPSF7-211ENST00000477890 CTDSPL2Q05D32 466 aa13.94□□□□□ -0.18
CPSF7-211ENST00000477890 KCTD1Q719H9 257 aa13.94□□□□□ -0.18
CPSF7-211ENST00000477890 FAM133AQ8N9E0 248 aa13.94□□□□□ -0.18
CPSF7-211ENST00000477890 STAG1Q8WVM7 1258 aa13.94□□□□□ -0.18
CPSF7-211ENST00000477890 GMCL1Q96IK5 515 aa13.94□□□□□ -0.18
CPSF7-211ENST00000477890 KATNBL1Q9H079 304 aa13.94□□□□□ -0.18
CPSF7-211ENST00000477890 A1CFQ9NQ94 594 aaKnown RBP13.94□□□□□ -0.18
CPSF7-211ENST00000477890 TBX21Q9UL17 535 aa13.94□□□□□ -0.18
CPSF7-211ENST00000477890 ZNF536O15090 1300 aa13.93□□□□□ -0.18
CPSF7-211ENST00000477890 TMEM265A0A087WTH1 108 aa13.93□□□□□ -0.18
CPSF7-211ENST00000477890 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.93□□□□□ -0.18
CPSF7-211ENST00000477890 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.93□□□□□ -0.18
CPSF7-211ENST00000477890 ARVCFO00192 962 aa13.93□□□□□ -0.18
CPSF7-211ENST00000477890 ALAS1P13196 640 aa13.93□□□□□ -0.18
CPSF7-211ENST00000477890 FOSL2P15408 326 aa13.93□□□□□ -0.18
CPSF7-211ENST00000477890 CDK7P50613 346 aa13.93□□□□□ -0.18
CPSF7-211ENST00000477890 SNAP25P60880 206 aa13.93□□□□□ -0.18
CPSF7-211ENST00000477890 PPP4R3BQ5MIZ7 849 aa13.93□□□□□ -0.18
CPSF7-211ENST00000477890 MFSD5Q6N075 450 aa13.93□□□□□ -0.18
CPSF7-211ENST00000477890 CCDC174Q6PII3 467 aa13.93□□□□□ -0.18
CPSF7-211ENST00000477890 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
CPSF7-211ENST00000477890 TRERF1Q96PN7 1200 aa13.93□□□□□ -0.18
CPSF7-211ENST00000477890 INCENPQ9NQS7 918 aa13.93□□□□□ -0.18
CPSF7-211ENST00000477890 MTMR7Q9Y216 660 aa13.93□□□□□ -0.18
CPSF7-211ENST00000477890 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.93□□□□□ -0.18
CPSF7-211ENST00000477890 UNC80Q8N2C7 3258 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.92□□□□□ -0.18
CPSF7-211ENST00000477890 SOWAHBA6NEL2 793 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 ASB14A6NK59 587 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 FOXP2O15409 715 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 NMT2O60551 498 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 PLA2G6O60733 806 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 BEX3Q00994 111 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 TNFAIP2Q03169 654 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 TKFCQ3LXA3 575 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 RCSD1Q6JBY9 416 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 RASGRP2Q7LDG7 609 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.92□□□□□ -0.181e-7■■■■□ 22.5
CPSF7-211ENST00000477890 PPP1R12CQ9BZL4 782 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 IL17RBQ9NRM6 502 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 LRRC37A2A6NM11 1700 aa13.92□□□□□ -0.18
CPSF7-211ENST00000477890 CTAGE5O15320 804 aa13.91□□□□□ -0.18
CPSF7-211ENST00000477890 TLR3O15455 904 aaKnown RBP13.91□□□□□ -0.18
CPSF7-211ENST00000477890 RANBP6O60518 1105 aaKnown RBP13.91□□□□□ -0.18
CPSF7-211ENST00000477890 DNAJB2P25686 324 aa13.91□□□□□ -0.18
CPSF7-211ENST00000477890 PPIGQ13427 754 aaKnown RBP eCLIP13.91□□□□□ -0.181e-7■■■□□ 14.7
CPSF7-211ENST00000477890 VPS53Q5VIR6 699 aa13.91□□□□□ -0.18
CPSF7-211ENST00000477890 FAM126BQ8IXS8 530 aa13.91□□□□□ -0.18
CPSF7-211ENST00000477890 ZBTB47Q9UFB7 747 aaPredicted RBP13.91□□□□□ -0.18
CPSF7-211ENST00000477890 PRR12Q9ULL5 1215 aa13.91□□□□□ -0.18
CPSF7-211ENST00000477890 DDX49Q9Y6V7 483 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms