RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 MED14OSP0DP75 135 aa7.61□□□□□ -1.19
VPS50-213ENST00000477572 ZSCAN22P10073 491 aaPredicted RBP7.61□□□□□ -1.19
VPS50-213ENST00000477572 PRKCAP17252 672 aa7.61□□□□□ -1.19
VPS50-213ENST00000477572 SRSF3P84103 164 aaKnown RBP7.61□□□□□ -1.19
VPS50-213ENST00000477572 PPP2R5DQ14738 602 aa7.61□□□□□ -1.19
VPS50-213ENST00000477572 GNPTABQ3T906 1256 aa7.61□□□□□ -1.19
VPS50-213ENST00000477572 NAT16Q8N8M0 369 aa7.61□□□□□ -1.19
VPS50-213ENST00000477572 RGS22Q8NE09 1264 aa7.61□□□□□ -1.19
VPS50-213ENST00000477572 ZSCAN18Q8TBC5 510 aaPredicted RBP7.61□□□□□ -1.19
VPS50-213ENST00000477572 SRRTQ9BXP5 876 aaKnown RBP7.61□□□□□ -1.19
VPS50-213ENST00000477572 IRF2BPLQ9H1B7 796 aa7.61□□□□□ -1.19
VPS50-213ENST00000477572 ACBD3Q9H3P7 528 aa7.61□□□□□ -1.19
VPS50-213ENST00000477572 WTIPA6NIX2 430 aaPredicted RBP7.6□□□□□ -1.19
VPS50-213ENST00000477572 CBFA2T2O43439 604 aa7.6□□□□□ -1.19
VPS50-213ENST00000477572 LINC00310P59036 64 aa7.6□□□□□ -1.19
VPS50-213ENST00000477572 COL9A2Q14055 689 aaPredicted RBP7.6□□□□□ -1.19
VPS50-213ENST00000477572 ANKRD39Q53RE8 183 aa7.6□□□□□ -1.19
VPS50-213ENST00000477572 GALNT18Q6P9A2 607 aa7.6□□□□□ -1.19
VPS50-213ENST00000477572 SLCO6A1Q86UG4 719 aa7.6□□□□□ -1.19
VPS50-213ENST00000477572 NUP43Q8NFH3 380 aa7.6□□□□□ -1.19
VPS50-213ENST00000477572 CPLX3Q8WVH0 158 aa7.6□□□□□ -1.19
VPS50-213ENST00000477572 SMARCC1Q92922 1105 aaPredicted RBP7.6□□□□□ -1.19
VPS50-213ENST00000477572 JMJD8Q96S16 334 aa7.6□□□□□ -1.19
VPS50-213ENST00000477572 GCM1Q9NP62 436 aa7.6□□□□□ -1.19
VPS50-213ENST00000477572 CRTAC1Q9NQ79 661 aa7.6□□□□□ -1.19
VPS50-213ENST00000477572 PRR13Q9NZ81 148 aa7.6□□□□□ -1.19
VPS50-213ENST00000477572 IMPACTQ9P2X3 320 aa7.6□□□□□ -1.19
VPS50-213ENST00000477572 A0A1W2PQH9 124 aa7.59□□□□□ -1.19
VPS50-213ENST00000477572 NUAK1O60285 661 aa7.59□□□□□ -1.19
VPS50-213ENST00000477572 PEX10O60683 326 aa7.59□□□□□ -1.19
VPS50-213ENST00000477572 CD3EP07766 207 aa7.59□□□□□ -1.19
VPS50-213ENST00000477572 ITGA4P13612 1032 aa7.59□□□□□ -1.19
VPS50-213ENST00000477572 IFNGR1P15260 489 aa7.59□□□□□ -1.19
VPS50-213ENST00000477572 PNLIPP16233 465 aa7.59□□□□□ -1.19
VPS50-213ENST00000477572 GIPRP48546 466 aa7.59□□□□□ -1.19
VPS50-213ENST00000477572 CIAPIN1Q6FI81 312 aa7.59□□□□□ -1.19
VPS50-213ENST00000477572 RASGRP4Q8TDF6 673 aa7.59□□□□□ -1.19
VPS50-213ENST00000477572 FGD4Q96M96 766 aa7.59□□□□□ -1.19
VPS50-213ENST00000477572 HAUS7Q99871 368 aa7.59□□□□□ -1.19
VPS50-213ENST00000477572 FHOD1Q9Y613 1164 aa7.59□□□□□ -1.19
VPS50-213ENST00000477572 TEX51A0A1B0GUA7 166 aa7.58□□□□□ -1.2
VPS50-213ENST00000477572 NUDT19A8MXV4 375 aa7.58□□□□□ -1.2
VPS50-213ENST00000477572 VIPR1P32241 457 aa7.58□□□□□ -1.2
VPS50-213ENST00000477572 GJA8P48165 433 aa7.58□□□□□ -1.2
VPS50-213ENST00000477572 CYP4F8P98187 520 aa7.58□□□□□ -1.2
VPS50-213ENST00000477572 TCEAL1Q15170 157 aa7.58□□□□□ -1.2
VPS50-213ENST00000477572 FBLN7Q53RD9 439 aa7.58□□□□□ -1.2
VPS50-213ENST00000477572 ADAT2Q7Z6V5 191 aaKnown RBP7.58□□□□□ -1.2
VPS50-213ENST00000477572 SPATA32Q96LK8 384 aa7.58□□□□□ -1.2
VPS50-213ENST00000477572 FCRL3Q96P31 734 aaPredicted RBP7.58□□□□□ -1.2
VPS50-213ENST00000477572 SIRT5Q9NXA8 310 aa7.58□□□□□ -1.2
VPS50-213ENST00000477572 INPP5FQ9Y2H2 1132 aa7.58□□□□□ -1.2
VPS50-213ENST00000477572 SEMA7AO75326 666 aa7.57□□□□□ -1.2
VPS50-213ENST00000477572 ENDOUP21128 410 aaKnown RBP7.57□□□□□ -1.2
VPS50-213ENST00000477572 EPHB3P54753 998 aa7.57□□□□□ -1.2
VPS50-213ENST00000477572 JAMLQ86YT9 394 aa7.57□□□□□ -1.2
VPS50-213ENST00000477572 CCSER2Q9H7U1 834 aa7.57□□□□□ -1.2
VPS50-213ENST00000477572 A0A1W2PQ27 194 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 A0A1W2PQ45 241 aaPredicted RBP7.56□□□□□ -1.2
VPS50-213ENST00000477572 A0A1W2PQ64 194 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 A0A1W2PQC6 194 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 A0A1W2PQD8 194 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 A0A1W2PQY0 241 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 EPHX1P07099 455 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 MSL3P1P0C860 447 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 ARL4AP40617 200 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 SLC7A5Q01650 507 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 SSPNQ14714 243 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 RAB3GAP1Q15042 981 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 DPY19L1Q2PZI1 675 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 HEATR6Q6AI08 1181 aaKnown RBP7.56□□□□□ -1.2
VPS50-213ENST00000477572 FAM169BQ8N8A8 192 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 PANK1Q8TE04 598 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 ANAPC16Q96DE5 110 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 SHDQ96IW2 340 aa7.56□□□□□ -1.2
VPS50-213ENST00000477572 MBD1Q9UIS9 605 aaPredicted RBP7.56□□□□□ -1.2
VPS50-213ENST00000477572 CNOT6Q9ULM6 557 aaKnown RBP7.56□□□□□ -1.2
VPS50-213ENST00000477572 SF3B6Q9Y3B4 125 aaKnown RBP7.56□□□□□ -1.2
VPS50-213ENST00000477572 FGF10O15520 208 aaPredicted RBP7.55□□□□□ -1.2
VPS50-213ENST00000477572 VAMP4O75379 141 aa7.55□□□□□ -1.2
VPS50-213ENST00000477572 MPOP05164 745 aa7.55□□□□□ -1.2
VPS50-213ENST00000477572 NOP2P46087 812 aaKnown RBP7.55□□□□□ -1.2
VPS50-213ENST00000477572 ERVFRD-1P60508 538 aa7.55□□□□□ -1.2
VPS50-213ENST00000477572 MVKQ03426 396 aa7.55□□□□□ -1.2
VPS50-213ENST00000477572 MCMBPQ9BTE3 642 aa7.55□□□□□ -1.2
VPS50-213ENST00000477572 TGIF2Q9GZN2 237 aa7.55□□□□□ -1.2
VPS50-213ENST00000477572 KLHL25Q9H0H3 589 aa7.55□□□□□ -1.2
VPS50-213ENST00000477572 PHAXQ9H814 394 aaKnown RBP7.55□□□□□ -1.2
VPS50-213ENST00000477572 CNTD2Q9H8S5 307 aa7.55□□□□□ -1.2
VPS50-213ENST00000477572 KLHL14Q9P2G3 628 aa7.55□□□□□ -1.2
VPS50-213ENST00000477572 ACSL6Q9UKU0 697 aa7.55□□□□□ -1.2
VPS50-213ENST00000477572 STXBP3O00186 592 aa7.54□□□□□ -1.2
VPS50-213ENST00000477572 TACR1P25103 407 aa7.54□□□□□ -1.2
VPS50-213ENST00000477572 POU4F1Q01851 419 aa7.54□□□□□ -1.2
VPS50-213ENST00000477572 LCE4AQ5TA78 99 aa7.54□□□□□ -1.2
VPS50-213ENST00000477572 HLA-DQA1Q5Y7H0 255 aa7.54□□□□□ -1.2
VPS50-213ENST00000477572 TMC6Q7Z403 805 aa7.54□□□□□ -1.2
VPS50-213ENST00000477572 KLHL6Q8WZ60 621 aa7.54□□□□□ -1.2
VPS50-213ENST00000477572 ZNF428Q96B54 188 aa7.54□□□□□ -1.2
VPS50-213ENST00000477572 WHRNQ9P202 907 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms