RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 NYAP1Q6ZVC0 841 aa12.48□□□□□ -0.41
HLA-DMB-260ENST00000477537 ZNF592Q92610 1267 aa12.48□□□□□ -0.41
HLA-DMB-260ENST00000477537 MTRQ99707 1265 aa12.48□□□□□ -0.41
HLA-DMB-260ENST00000477537 MTFR1LQ9H019 292 aa12.48□□□□□ -0.41
HLA-DMB-260ENST00000477537 RIOX1Q9H6W3 641 aa12.48□□□□□ -0.41
HLA-DMB-260ENST00000477537 KCNQ5Q9NR82 932 aa12.48□□□□□ -0.41
HLA-DMB-260ENST00000477537 PP2D1A8MPX8 630 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 LAD1O00515 517 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 HLA-DOAP06340 250 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 SHMT1P34896 483 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 CRKP46108 304 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 LETM2Q2VYF4 491 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 RASSF8Q8NHQ8 419 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 GPCPD1Q9NPB8 672 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 DISC1Q9NRI5 854 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 CTNND2Q9UQB3 1225 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 PAXBP1Q9Y5B6 917 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 RRP9O43818 475 aaKnown RBP12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 CCNT1O60563 726 aaKnown RBP12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 TTLL1O95922 423 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 UBA7P41226 1012 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 KCNJ6P48051 423 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 HSP90AA2PQ14568 343 aaPredicted RBP12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 RRAGBQ5VZM2 374 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 CCDC112Q8NEF3 446 aa12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 BIN2Q9UBW5 565 aaPredicted RBP12.47□□□□□ -0.41
HLA-DMB-260ENST00000477537 MYO3BQ8WXR4 1341 aa12.46□□□□□ -0.41
HLA-DMB-260ENST00000477537 MYH4Q9Y623 1939 aa12.46□□□□□ -0.41
HLA-DMB-260ENST00000477537 H0YIN7 160 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 MPHOSPH10O00566 681 aaKnown RBP12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 SOCS7O14512 581 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 RPN1P04843 607 aaKnown RBP12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 OR52Z1P0C646 297 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 SNHG28P0DPA3 235 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 PRPHP41219 470 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 NFIAQ12857 509 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 TBX2Q13207 712 aaPredicted RBP12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 JAKMIP3Q5VZ66 844 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 PODNQ7Z5L7 613 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 NEK8Q86SG6 692 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 REXO1Q8N1G1 1221 aaKnown RBP12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 PPP1R13BQ96KQ4 1090 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 PLIN2Q99541 437 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 RMND1Q9NWS8 449 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 TMEM260Q9NX78 707 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 SLX4Q8IY92 1834 aa12.46□□□□□ -0.42
HLA-DMB-260ENST00000477537 A0A1B0GTH6 734 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 ESYT2A0FGR8 921 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 hCG_1984214I3L0E3 225 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 COBLO75128 1261 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 CHRNA5P30532 468 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 PTGER2P43116 358 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 ATP2B2Q01814 1243 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 ZNF543Q08ER8 600 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 NR1I3Q14994 352 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 NAALADL2Q58DX5 795 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 SPECC1LQ69YQ0 1117 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 STYK1Q6J9G0 422 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 KIAA0825Q8IV33 1275 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 ZFPM1Q8IX07 1006 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 ZNF713Q8N859 430 aaPredicted RBP12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 TBCKQ8TEA7 893 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 COA7Q96BR5 231 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 ZDHHC15Q96MV8 337 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 CCSER1Q9C0I3 900 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 TMX1Q9H3N1 280 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 PPP1R1BQ9UD71 204 aaPredicted RBP12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 SCN9AQ15858 1988 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 GREB1LQ9C091 1923 aaPredicted RBP12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 ECE2O60344 883 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 SLURP2P0DP57 97 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 ADCY7P51828 1080 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 RBM5P52756 815 aaKnown RBP eCLIP12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 ZNF658Q5TYW1 1059 aaPredicted RBP12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 CDKAL1Q5VV42 579 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 APTXQ7Z2E3 356 aaKnown RBP12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 SGIP1Q9BQI5 828 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 PCDHAC2Q9Y5I4 1007 aa12.45□□□□□ -0.42
HLA-DMB-260ENST00000477537 C10orf71Q711Q0 1435 aa12.44□□□□□ -0.42
HLA-DMB-260ENST00000477537 CACNB3P54284 484 aa12.44□□□□□ -0.42
HLA-DMB-260ENST00000477537 TCP10Q12799 353 aa12.44□□□□□ -0.42
HLA-DMB-260ENST00000477537 CCDC96Q2M329 555 aa12.44□□□□□ -0.42
HLA-DMB-260ENST00000477537 STRIP1Q5VSL9 837 aa12.44□□□□□ -0.42
HLA-DMB-260ENST00000477537 CABP7Q86V35 215 aa12.44□□□□□ -0.42
HLA-DMB-260ENST00000477537 EHD4Q9H223 541 aa12.44□□□□□ -0.42
HLA-DMB-260ENST00000477537 RWDD2AQ9UIY3 292 aa12.44□□□□□ -0.42
HLA-DMB-260ENST00000477537 KIF2AO00139 706 aaPredicted RBP12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 TEX33O43247 280 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 CTIFO43310 598 aaKnown RBP12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 POLD1P28340 1107 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 PAK1Q13153 545 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 DACT2Q5SW24 774 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 TTBK2Q6IQ55 1244 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 PPP4R3CPQ6ZMV5 832 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 ADGRF4Q8IZF3 695 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 NELFBQ8WX92 580 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 AK8Q96MA6 479 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 JMJD4Q9H9V9 463 aa12.43□□□□□ -0.42
HLA-DMB-260ENST00000477537 SIPA1L1O43166 1804 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms