RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 CDK8P49336 464 aa16.26■□□□□ 0.19
HDAC6-220ENST00000477528 RAD51AP2Q09MP3 1159 aa16.26■□□□□ 0.19
HDAC6-220ENST00000477528 C2CD5Q86YS7 1000 aa16.26■□□□□ 0.19
HDAC6-220ENST00000477528 SLFN12Q8IYM2 578 aa16.26■□□□□ 0.19
HDAC6-220ENST00000477528 TBCKQ8TEA7 893 aa16.26■□□□□ 0.19
HDAC6-220ENST00000477528 SH3RF3Q8TEJ3 882 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-220ENST00000477528 RPGRIP1Q96KN7 1286 aa16.26■□□□□ 0.19
HDAC6-220ENST00000477528 CDC25AP30304 524 aa16.26■□□□□ 0.19
HDAC6-220ENST00000477528 TYW1BQ6NUM6 668 aa16.26■□□□□ 0.19
HDAC6-220ENST00000477528 GPBP1Q86WP2 473 aa16.26■□□□□ 0.19
HDAC6-220ENST00000477528 TUBGCP2Q9BSJ2 902 aa16.26■□□□□ 0.19
HDAC6-220ENST00000477528 SERPINB13Q9UIV8 391 aa16.26■□□□□ 0.19
HDAC6-220ENST00000477528 SAR1BQ9Y6B6 198 aa16.26■□□□□ 0.19
HDAC6-220ENST00000477528 AKAP12Q02952 1782 aa16.26■□□□□ 0.19
HDAC6-220ENST00000477528 IVLP07476 585 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 BRD3Q15059 726 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 SFMBT2Q5VUG0 894 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 KIAA0825Q8IV33 1275 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 UIMC1Q96RL1 719 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 HPS5Q9UPZ3 1129 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 COBLO75128 1261 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 ERCC3P19447 782 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 USP17L2Q6R6M4 530 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 EPB41L4AQ9HCS5 686 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-220ENST00000477528 CAPN2P17655 700 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 DESP17661 470 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 SLFN13Q68D06 897 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 LARP4BQ92615 738 aaKnown RBP16.25■□□□□ 0.19
HDAC6-220ENST00000477528 STK32BQ9NY57 414 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 GUCY1A2P33402 732 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 ICA1Q05084 483 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 SEPT7Q16181 437 aaKnown RBP16.25■□□□□ 0.19
HDAC6-220ENST00000477528 P2RX5Q93086 422 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 CNOT6LQ96LI5 555 aaKnown RBP16.25■□□□□ 0.19
HDAC6-220ENST00000477528 PANX2Q96RD6 677 aa16.25■□□□□ 0.19
HDAC6-220ENST00000477528 NTSR2O95665 410 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 APBA3O96018 575 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 CFBP00751 764 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 PLS1Q14651 629 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 RGS22Q8NE09 1264 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 CTNNBL1Q8WYA6 563 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-220ENST00000477528 PHACTR2O75167 634 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 DISC1Q9NRI5 854 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 PCDHA1Q9Y5I3 950 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 ARHGEF35A5YM69 484 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 GCOM1H8Y6P7 765 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-220ENST00000477528 NMT2O60551 498 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 MYZAPP0CAP1 466 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 FAM26FQ5R3K3 315 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 MICALCLQ6ZW33 695 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 CCDC113Q9H0I3 377 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 PANK4Q9NVE7 773 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 STK17AQ9UEE5 414 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 TSKSQ9UJT2 592 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 ZBTB21Q9ULJ3 1066 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 SPATA31A1Q5TZJ5 1347 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 KLHL30Q0D2K2 578 aa16.24■□□□□ 0.19
HDAC6-220ENST00000477528 PRR16Q569H4 304 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 TRIM58Q8NG06 486 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 NSUN4Q96CB9 384 aaKnown RBP16.23■□□□□ 0.19
HDAC6-220ENST00000477528 KCNF1Q9H3M0 494 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 MRPL44Q9H9J2 332 aaKnown RBP16.23■□□□□ 0.19
HDAC6-220ENST00000477528 MYO1AQ9UBC5 1043 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 GCFC2P16383 781 aaKnown RBP16.23■□□□□ 0.19
HDAC6-220ENST00000477528 FBXO11Q86XK2 927 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 LARGE2Q8N3Y3 721 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 RETREG2Q8NC44 543 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 NLRC4Q9NPP4 1024 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 RASAL2Q9UJF2 1139 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 ST3GAL1Q11201 340 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 C8orf74Q6P047 294 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 NBPF11Q86T75 865 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 AGXT2Q9BYV1 514 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 PKD2L1Q9P0L9 805 aa16.23■□□□□ 0.19
HDAC6-220ENST00000477528 GSTTP1A0A1W2PQM5 241 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 GCNT3O95395 438 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 ZYXQ15942 572 aaKnown RBP16.22■□□□□ 0.19
HDAC6-220ENST00000477528 MYCT1Q8N699 235 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 ENGASEQ8NFI3 743 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 CHURC1Q8WUH1 139 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 DYDC1Q8WWB3 177 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 IFT81Q8WYA0 676 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 ARHGEF1Q92888 912 aaKnown RBP16.22■□□□□ 0.19
HDAC6-220ENST00000477528 TMEM47Q9BQJ4 181 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 CDC23Q9UJX2 597 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 FBXO2Q9UK22 296 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-220ENST00000477528 B4DLN1 442 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 PPIP5K2O43314 1243 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 NEFHP12036 1026 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 DLGAP5Q15398 846 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 MARCH10Q8NA82 808 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-220ENST00000477528 FOSP01100 380 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-220ENST00000477528 RABGGTAQ92696 567 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 GPR101Q96P66 508 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-220ENST00000477528 THAP9Q9H5L6 903 aa16.22■□□□□ 0.19
HDAC6-220ENST00000477528 METTL16Q86W50 562 aaKnown RBP16.22■□□□□ 0.19
HDAC6-220ENST00000477528 PLCG1P19174 1290 aa16.21■□□□□ 0.19
HDAC6-220ENST00000477528 GRM4Q14833 912 aa16.21■□□□□ 0.19
HDAC6-220ENST00000477528 WDR78Q5VTH9 848 aa16.21■□□□□ 0.19
HDAC6-220ENST00000477528 COA1Q9GZY4 146 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms