RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 SNRNP48Q6IEG0 339 aaKnown RBP15.28■□□□□ 0.04
TOP3A-205ENST00000477508 APOA5Q6Q788 366 aa15.28■□□□□ 0.04
TOP3A-205ENST00000477508 Q6ZUG5 572 aa15.28■□□□□ 0.04
TOP3A-205ENST00000477508 NCAPG2Q86XI2 1143 aa15.28■□□□□ 0.04
TOP3A-205ENST00000477508 ABRAQ8N0Z2 381 aa15.28■□□□□ 0.04
TOP3A-205ENST00000477508 TCEANC2Q96MN5 208 aa15.28■□□□□ 0.04
TOP3A-205ENST00000477508 NUDT12Q9BQG2 462 aa15.28■□□□□ 0.04
TOP3A-205ENST00000477508 COL11A1P12107 1806 aaPredicted RBP15.28■□□□□ 0.04
TOP3A-205ENST00000477508 SLC15A5A6NIM6 579 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 ZBTB43O43298 467 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 DHX16O60231 1041 aaKnown RBP15.27■□□□□ 0.04
TOP3A-205ENST00000477508 PEX10O60683 326 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 ICAM1P05362 532 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 FCER1AP12319 257 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 PTPREP23469 700 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 CAP1Q01518 475 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 MKRN4PQ13434 485 aaPredicted RBP15.27■□□□□ 0.04
TOP3A-205ENST00000477508 ADGRF4Q8IZF3 695 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 FANCBQ8NB91 859 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 CHST13Q8NET6 341 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 IL27Q8NEV9 243 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 RAET1EQ8TD07 263 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 UBA5Q9GZZ9 404 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 RAVER2Q9HCJ3 691 aaKnown RBP15.27■□□□□ 0.04
TOP3A-205ENST00000477508 RBM28Q9NW13 759 aaKnown RBP15.27■□□□□ 0.04
TOP3A-205ENST00000477508 GJD2Q9UKL4 321 aa15.27■□□□□ 0.04
TOP3A-205ENST00000477508 DOCK3Q8IZD9 2030 aa15.27■□□□□ 0.03
TOP3A-205ENST00000477508 KLF18A0A0U1RQI7 1052 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 CCDC196A0A1B0GTZ2 297 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 ECM2O94769 699 aaPredicted RBP15.26■□□□□ 0.03
TOP3A-205ENST00000477508 XRCC5P13010 732 aaKnown RBP15.26■□□□□ 0.03
TOP3A-205ENST00000477508 CPA1P15085 419 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 FLT3LGP49771 235 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 PRKCZQ05513 592 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 ANKRD1Q15327 319 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.26■□□□□ 0.03
TOP3A-205ENST00000477508 TRMT44Q8IYL2 757 aaKnown RBP15.26■□□□□ 0.03
TOP3A-205ENST00000477508 STAG2Q8N3U4 1231 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 BRF1Q92994 677 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 C22orf23Q9BZE7 217 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 UPF3BQ9BZI7 483 aaKnown RBP15.26■□□□□ 0.03
TOP3A-205ENST00000477508 MCOLN1Q9GZU1 580 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 ALDH8A1Q9H2A2 487 aaPredicted RBP15.26■□□□□ 0.03
TOP3A-205ENST00000477508 RIOX1Q9H6W3 641 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 PDRG1Q9NUG6 133 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 SLC5A4Q9NY91 659 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 CCPG1Q9ULG6 757 aa15.26■□□□□ 0.03
TOP3A-205ENST00000477508 ZNF536O15090 1300 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 SPDYE4A6NLX3 237 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 RGS2P41220 211 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 RBM25P49756 843 aaKnown RBP15.25■□□□□ 0.03
TOP3A-205ENST00000477508 EVCP57679 992 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 MAP2K5Q13163 448 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 GRB14Q14449 540 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 KCTD2Q14681 263 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 MORN1Q5T089 497 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 CCDC174Q6PII3 467 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 NBPF11Q86T75 865 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 MICU3Q86XE3 530 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 MMP19Q99542 508 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 MYL10Q9BUA6 226 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 SPZ1Q9BXG8 430 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 MAF1Q9H063 256 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 JMJD4Q9H9V9 463 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 BRPF3Q9ULD4 1205 aa15.25■□□□□ 0.03
TOP3A-205ENST00000477508 HOXC6P09630 235 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 SLC4A3P48751 1232 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 CDC37Q16543 378 aaPredicted RBP15.24■□□□□ 0.03
TOP3A-205ENST00000477508 RTN1Q16799 776 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 SLAIN1Q8ND83 568 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 PXYLP1Q8TE99 480 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 USP6NLQ92738 828 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 MTMR8Q96EF0 704 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 AGBL1Q96MI9 1066 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 TRERF1Q96PN7 1200 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 ACAD9Q9H845 621 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 VAT1LQ9HCJ6 419 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 NAP1L2Q9ULW6 460 aaPredicted RBP15.24■□□□□ 0.03
TOP3A-205ENST00000477508 GABRQQ9UN88 632 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 RIPK3Q9Y572 518 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 PTCH2Q9Y6C5 1203 aa15.24■□□□□ 0.03
TOP3A-205ENST00000477508 ZSWIM8A7E2V4 1837 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 GOLGA8AA7E2F4 631 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 GOLGA8BA8MQT2 603 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 ZBTB5O15062 677 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 ALAS1P13196 640 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 ADORA2AP29274 412 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 SNAP25P60880 206 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 APOBRQ0VD83 1088 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 SLC9C1Q4G0N8 1177 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 DPP9Q86TI2 863 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 FBXO11Q86XK2 927 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 RRP36Q96EU6 259 aaKnown RBP15.23■□□□□ 0.03
TOP3A-205ENST00000477508 DDX11Q96FC9 970 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 ZNF274Q96GC6 653 aaPredicted RBP15.23■□□□□ 0.03
TOP3A-205ENST00000477508 APBA2Q99767 749 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 AMNQ9BXJ7 453 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 BACH2Q9BYV9 841 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 CPVLQ9H3G5 476 aa15.23■□□□□ 0.03
TOP3A-205ENST00000477508 RNF146Q9NTX7 359 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms