RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 STAG1Q8WVM7 1258 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 EVI5LQ96CN4 794 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 CRBNQ96SW2 442 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 ABHD16BQ9H3Z7 469 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 ACAD9Q9H845 621 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 STARD7Q9NQZ5 370 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 HOMER2Q9NSB8 354 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 ZBTB47Q9UFB7 747 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-236ENST00000477477 STX8Q9UNK0 236 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 A0A0C4DFX4 3053 aa13.48□□□□□ -0.25
HDLBP-236ENST00000477477 ZNF536O15090 1300 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 MYADML2A6NDP7 307 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 KIAA0355O15063 1070 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 ADCY6O43306 1168 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 PLA2G6O60733 806 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 MCCP23508 829 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 CST5P28325 142 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-236ENST00000477477 IKQ13123 557 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-236ENST00000477477 KCNA10Q16322 511 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 ZNF697Q5TEC3 545 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 ANKRD33Q7Z3H0 272 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 CCDC144CPQ8IYA2 1237 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 NUP133Q8WUM0 1156 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 AGBL1Q96MI9 1066 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 TOX2Q96NM4 488 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 GUCD1Q96NT3 240 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 KATNBL1Q9H079 304 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 A1CFQ9NQ94 594 aaKnown RBP13.47□□□□□ -0.25
HDLBP-236ENST00000477477 INCENPQ9NQS7 918 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 IL17RBQ9NRM6 502 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 RNF146Q9NTX7 359 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 ANAPC4Q9UJX5 808 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 SMCHD1A6NHR9 2005 aa13.47□□□□□ -0.25
HDLBP-236ENST00000477477 ORC4O43929 436 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 NMT2O60551 498 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 C6orf222P0C671 652 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-236ENST00000477477 RAG1P15918 1043 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 NOVP48745 357 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 PDE1AP54750 535 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 IRX5P78411 483 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-236ENST00000477477 CNTN2Q02246 1040 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 FAAP100Q0VG06 881 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 HDAC1Q13547 482 aaPredicted RBP13.46□□□□□ -0.25
HDLBP-236ENST00000477477 TKFCQ3LXA3 575 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 CCDC144BQ3MJ40 725 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 RCSD1Q6JBY9 416 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 KCTD1Q719H9 257 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 RASGRP2Q7LDG7 609 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 FAM133AQ8N9E0 248 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 CHMP4CQ96CF2 233 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 FAM161BQ96MY7 647 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 UPF3AQ9H1J1 476 aaKnown RBP13.46□□□□□ -0.25
HDLBP-236ENST00000477477 SPC25Q9HBM1 224 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 HELLSQ9NRZ9 838 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 TMEM39AQ9NV64 488 aa13.46□□□□□ -0.25
HDLBP-236ENST00000477477 ELP1O95163 1332 aa13.45□□□□□ -0.26
HDLBP-236ENST00000477477 DLL1O00548 723 aa13.45□□□□□ -0.26
HDLBP-236ENST00000477477 RANBP6O60518 1105 aaKnown RBP13.45□□□□□ -0.26
HDLBP-236ENST00000477477 FGRP09769 529 aa13.45□□□□□ -0.26
HDLBP-236ENST00000477477 EPHB4P54760 987 aa13.45□□□□□ -0.26
HDLBP-236ENST00000477477 GJA9P57773 515 aa13.45□□□□□ -0.26
HDLBP-236ENST00000477477 SMAD3P84022 425 aaKnown RBP13.45□□□□□ -0.26
HDLBP-236ENST00000477477 ALX1Q15699 326 aa13.45□□□□□ -0.26
HDLBP-236ENST00000477477 PCSK9Q8NBP7 692 aaKnown RBP13.45□□□□□ -0.26
HDLBP-236ENST00000477477 GLT1D1Q96MS3 346 aa13.45□□□□□ -0.26
HDLBP-236ENST00000477477 PRR12Q9ULL5 1215 aa13.45□□□□□ -0.26
HDLBP-236ENST00000477477 A0A0D9SFI3 127 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 SOWAHBA6NEL2 793 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 DCDC2CA8MYV0 355 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 ASGR1P07306 291 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 ALAS1P13196 640 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 SNAP25P60880 206 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 NKX3-2P78367 333 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 FPGSQ05932 587 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 CCDC174Q6PII3 467 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 DCAF4Q8WV16 495 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 RNPC3Q96LT9 517 aaKnown RBP13.44□□□□□ -0.26
HDLBP-236ENST00000477477 FAM227BQ96M60 508 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 TRERF1Q96PN7 1200 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 TBX21Q9UL17 535 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 MTMR7Q9Y216 660 aa13.44□□□□□ -0.26
HDLBP-236ENST00000477477 ASTN1O14525 1302 aa13.43□□□□□ -0.26
HDLBP-236ENST00000477477 MROH7Q68CQ1 1323 aa13.43□□□□□ -0.26
HDLBP-236ENST00000477477 A0A0U1RQG5 324 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-236ENST00000477477 ASB14A6NK59 587 aa13.43□□□□□ -0.26
HDLBP-236ENST00000477477 CTAGE5O15320 804 aa13.43□□□□□ -0.26
HDLBP-236ENST00000477477 FGAP02671 866 aa13.43□□□□□ -0.26
HDLBP-236ENST00000477477 CDK7P50613 346 aa13.43□□□□□ -0.26
HDLBP-236ENST00000477477 CCDC96Q2M329 555 aa13.43□□□□□ -0.26
HDLBP-236ENST00000477477 MCMDC2Q4G0Z9 681 aa13.43□□□□□ -0.26
HDLBP-236ENST00000477477 MUM1L1Q5H9M0 696 aa13.43□□□□□ -0.26
HDLBP-236ENST00000477477 GNASQ5JWF2 1037 aa13.43□□□□□ -0.26
HDLBP-236ENST00000477477 TICAM2Q86XR7 235 aa13.43□□□□□ -0.26
HDLBP-236ENST00000477477 CCPG1Q9ULG6 757 aa13.43□□□□□ -0.26
HDLBP-236ENST00000477477 ZMYM6O95789 1325 aa13.42□□□□□ -0.26
HDLBP-236ENST00000477477 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.42□□□□□ -0.26
HDLBP-236ENST00000477477 ARVCFO00192 962 aa13.42□□□□□ -0.26
HDLBP-236ENST00000477477 TIMP1P01033 207 aa13.42□□□□□ -0.26
HDLBP-236ENST00000477477 ICAM1P05362 532 aa13.42□□□□□ -0.26
HDLBP-236ENST00000477477 HSPD1P10809 573 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms