RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 CPA4Q9UI42 421 aa19.53■□□□□ 0.72
EPHB4-204ENST00000477446 BAZ2BQ9UIF8 2168 aaKnown RBP19.52■□□□□ 0.72
EPHB4-204ENST00000477446 GOLGA6L3A6NEY3 463 aa19.52■□□□□ 0.71
EPHB4-204ENST00000477446 CYTH3O43739 400 aa19.52■□□□□ 0.71
EPHB4-204ENST00000477446 SNAP25P60880 206 aa19.52■□□□□ 0.71
EPHB4-204ENST00000477446 PKP1Q13835 747 aa19.52■□□□□ 0.71
EPHB4-204ENST00000477446 TMTC3Q6ZXV5 915 aa19.52■□□□□ 0.71
EPHB4-204ENST00000477446 SRBD1Q8N5C6 995 aaKnown RBP19.52■□□□□ 0.71
EPHB4-204ENST00000477446 LZTS2Q9BRK4 669 aa19.52■□□□□ 0.71
EPHB4-204ENST00000477446 VAT1LQ9HCJ6 419 aa19.52■□□□□ 0.71
EPHB4-204ENST00000477446 BTBD7Q9P203 1132 aa19.52■□□□□ 0.71
EPHB4-204ENST00000477446 SMC3Q9UQE7 1217 aa19.52■□□□□ 0.71
EPHB4-204ENST00000477446 CCDC196A0A1B0GTZ2 297 aa19.51■□□□□ 0.71
EPHB4-204ENST00000477446 PFKFB2O60825 505 aa19.51■□□□□ 0.71
EPHB4-204ENST00000477446 CNMDO75829 334 aa19.51■□□□□ 0.71
EPHB4-204ENST00000477446 C17orf99Q6UX52 265 aa19.51■□□□□ 0.71
EPHB4-204ENST00000477446 CCDC82Q8N4S0 544 aa19.51■□□□□ 0.71
EPHB4-204ENST00000477446 ANKRD13CQ8N6S4 541 aa19.51■□□□□ 0.71
EPHB4-204ENST00000477446 MB21D1Q8N884 522 aa19.51■□□□□ 0.71
EPHB4-204ENST00000477446 REPS2Q8NFH8 660 aa19.51■□□□□ 0.71
EPHB4-204ENST00000477446 GTF3C2Q8WUA4 911 aaPredicted RBP19.51■□□□□ 0.71
EPHB4-204ENST00000477446 PAGR1Q9BTK6 254 aa19.51■□□□□ 0.71
EPHB4-204ENST00000477446 RIOX1Q9H6W3 641 aa19.51■□□□□ 0.71
EPHB4-204ENST00000477446 JMJD4Q9H9V9 463 aa19.51■□□□□ 0.71
EPHB4-204ENST00000477446 SLC38A10Q9HBR0 1119 aa19.51■□□□□ 0.71
EPHB4-204ENST00000477446 RABGAP1Q9Y3P9 1069 aa19.51■□□□□ 0.71
EPHB4-204ENST00000477446 FSD2A1L4K1 749 aa19.5■□□□□ 0.71
EPHB4-204ENST00000477446 DHX16O60231 1041 aaKnown RBP19.5■□□□□ 0.71
EPHB4-204ENST00000477446 ZBED4O75132 1171 aa19.5■□□□□ 0.71
EPHB4-204ENST00000477446 FDX1P10109 184 aa19.5■□□□□ 0.71
EPHB4-204ENST00000477446 BCRP11274 1271 aa19.5■□□□□ 0.71
EPHB4-204ENST00000477446 SMARCA1P28370 1054 aa19.5■□□□□ 0.71
EPHB4-204ENST00000477446 SCRN1Q12765 414 aa19.5■□□□□ 0.71
EPHB4-204ENST00000477446 TMEM132BQ14DG7 1078 aa19.5■□□□□ 0.71
EPHB4-204ENST00000477446 NECAB1Q8N987 351 aa19.5■□□□□ 0.71
EPHB4-204ENST00000477446 SPZ1Q9BXG8 430 aa19.5■□□□□ 0.71
EPHB4-204ENST00000477446 RANBP17Q9H2T7 1088 aaKnown RBP19.5■□□□□ 0.71
EPHB4-204ENST00000477446 LMBRD1Q9NUN5 540 aa19.5■□□□□ 0.71
EPHB4-204ENST00000477446 DDX49Q9Y6V7 483 aaKnown RBP19.5■□□□□ 0.71
EPHB4-204ENST00000477446 MYH6P13533 1939 aa19.5■□□□□ 0.71
EPHB4-204ENST00000477446 FUT2Q10981 343 aa19.49■□□□□ 0.71
EPHB4-204ENST00000477446 Q3C1V9 767 aa19.49■□□□□ 0.71
EPHB4-204ENST00000477446 MORF4L1Q9UBU8 362 aa19.49■□□□□ 0.71
EPHB4-204ENST00000477446 CTDP1Q9Y5B0 961 aaPredicted RBP19.49■□□□□ 0.71
EPHB4-204ENST00000477446 ATP6V1DQ9Y5K8 247 aa19.49■□□□□ 0.71
EPHB4-204ENST00000477446 ERVK-9P63128 1117 aa19.49■□□□□ 0.71
EPHB4-204ENST00000477446 ERVK-24P63145 666 aa19.49■□□□□ 0.71
EPHB4-204ENST00000477446 NTRK3Q16288 839 aa19.49■□□□□ 0.71
EPHB4-204ENST00000477446 CCDC174Q6PII3 467 aa19.49■□□□□ 0.71
EPHB4-204ENST00000477446 CPXCR1Q8N123 301 aa19.49■□□□□ 0.71
EPHB4-204ENST00000477446 GPRC5AQ8NFJ5 357 aa19.49■□□□□ 0.71
EPHB4-204ENST00000477446 MTMR8Q96EF0 704 aa19.49■□□□□ 0.71
EPHB4-204ENST00000477446 TSKSQ9UJT2 592 aa19.49■□□□□ 0.71
EPHB4-204ENST00000477446 ZNF214Q9UL59 606 aaPredicted RBP19.49■□□□□ 0.71
EPHB4-204ENST00000477446 PLS1Q14651 629 aa19.48■□□□□ 0.71
EPHB4-204ENST00000477446 CDC37Q16543 378 aaPredicted RBP19.48■□□□□ 0.71
EPHB4-204ENST00000477446 FAM110CQ1W6H9 321 aa19.48■□□□□ 0.71
EPHB4-204ENST00000477446 PIBF1Q8WXW3 757 aa19.48■□□□□ 0.71
EPHB4-204ENST00000477446 GTF3C6Q969F1 213 aa19.48■□□□□ 0.71
EPHB4-204ENST00000477446 PIGSQ96S52 555 aa19.48■□□□□ 0.71
EPHB4-204ENST00000477446 RAVER2Q9HCJ3 691 aaKnown RBP19.48■□□□□ 0.71
EPHB4-204ENST00000477446 ZNF536O15090 1300 aa19.47■□□□□ 0.71
EPHB4-204ENST00000477446 CNTNAP5Q8WYK1 1306 aa19.47■□□□□ 0.71
EPHB4-204ENST00000477446 SMCHD1A6NHR9 2005 aa19.47■□□□□ 0.71
EPHB4-204ENST00000477446 ATP2A1O14983 1001 aa19.47■□□□□ 0.71
EPHB4-204ENST00000477446 ST3GAL1Q11201 340 aa19.47■□□□□ 0.71
EPHB4-204ENST00000477446 HOMER1Q86YM7 354 aa19.47■□□□□ 0.71
EPHB4-204ENST00000477446 SPATC1LQ9H0A9 340 aa19.47■□□□□ 0.71
EPHB4-204ENST00000477446 GZF1Q9H116 711 aaPredicted RBP19.47■□□□□ 0.71
EPHB4-204ENST00000477446 GPR25O00155 361 aa19.46■□□□□ 0.71
EPHB4-204ENST00000477446 CPLX1O14810 134 aa19.46■□□□□ 0.71
EPHB4-204ENST00000477446 ZBTB5O15062 677 aa19.46■□□□□ 0.71
EPHB4-204ENST00000477446 MBD3O95983 291 aa19.46■□□□□ 0.71
EPHB4-204ENST00000477446 IFNAR1P17181 557 aa19.46■□□□□ 0.71
EPHB4-204ENST00000477446 STAT3P40763 770 aa19.46■□□□□ 0.71
EPHB4-204ENST00000477446 OAZ1P54368 228 aa19.46■□□□□ 0.71
EPHB4-204ENST00000477446 QRICH1Q2TAL8 776 aa19.46■□□□□ 0.71
EPHB4-204ENST00000477446 RRP36Q96EU6 259 aaKnown RBP19.46■□□□□ 0.71
EPHB4-204ENST00000477446 AGBL1Q96MI9 1066 aa19.46■□□□□ 0.71
EPHB4-204ENST00000477446 hCG_1642624A0A1W2PR95 340 aa19.45■□□□□ 0.7
EPHB4-204ENST00000477446 STX6O43752 255 aa19.45■□□□□ 0.7
EPHB4-204ENST00000477446 PPFIA3O75145 1194 aa19.45■□□□□ 0.7
EPHB4-204ENST00000477446 ICAM1P05362 532 aa19.45■□□□□ 0.7
EPHB4-204ENST00000477446 PDCP20941 246 aa19.45■□□□□ 0.7
EPHB4-204ENST00000477446 MRE11P49959 708 aa19.45■□□□□ 0.7
EPHB4-204ENST00000477446 SNRNP48Q6IEG0 339 aaKnown RBP19.45■□□□□ 0.7
EPHB4-204ENST00000477446 CCDC83Q8IWF9 413 aa19.45■□□□□ 0.7
EPHB4-204ENST00000477446 PHKBQ93100 1093 aa19.45■□□□□ 0.7
EPHB4-204ENST00000477446 MOV10L1Q9BXT6 1211 aaKnown RBP19.45■□□□□ 0.7
EPHB4-204ENST00000477446 TEX13BQ9BXU2 312 aa19.45■□□□□ 0.7
EPHB4-204ENST00000477446 V9GY48 417 aaPredicted RBP19.45■□□□□ 0.7
EPHB4-204ENST00000477446 PNMA6FA0A0J9YX94 578 aa19.44■□□□□ 0.7
EPHB4-204ENST00000477446 PPP1R11O60927 126 aaPredicted RBP19.44■□□□□ 0.7
EPHB4-204ENST00000477446 CTDNEP1O95476 244 aa19.44■□□□□ 0.7
EPHB4-204ENST00000477446 ZSCAN22P10073 491 aaPredicted RBP19.44■□□□□ 0.7
EPHB4-204ENST00000477446 CPLX2Q6PUV4 134 aaKnown RBP19.44■□□□□ 0.7
EPHB4-204ENST00000477446 RIPK3Q9Y572 518 aa19.44■□□□□ 0.7
EPHB4-204ENST00000477446 DTNBO60941 627 aa19.44■□□□□ 0.7
EPHB4-204ENST00000477446 PRPF40AO75400 957 aaKnown RBP19.44■□□□□ 0.7
EPHB4-204ENST00000477446 HSPA1AP0DMV8 641 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms