RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 KCNA1Q09470 495 aa6.6□□□□□ -1.35
PIKFYVE-209ENST00000477200 MLECQ14165 292 aa6.6□□□□□ -1.35
PIKFYVE-209ENST00000477200 UBXN11Q5T124 520 aa6.6□□□□□ -1.35
PIKFYVE-209ENST00000477200 ZC3H14Q6PJT7 736 aaKnown RBP6.6□□□□□ -1.35
PIKFYVE-209ENST00000477200 FAM196AQ6ZSG2 479 aa6.6□□□□□ -1.35
PIKFYVE-209ENST00000477200 LSRQ86X29 649 aaPredicted RBP6.6□□□□□ -1.35
PIKFYVE-209ENST00000477200 GMIPQ9P107 970 aa6.6□□□□□ -1.35
PIKFYVE-209ENST00000477200 ANKRD33BA6NCL7 494 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 K7ESM1 405 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 VAV1P15498 845 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 PFKLP17858 780 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 FBLN1P23142 703 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 BMP8BP34820 402 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 RAD51AP2Q09MP3 1159 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 NR1I3Q14994 352 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 CDCP2Q5VXM1 449 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 OVOS1Q6IE37 1185 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 LIPIQ6XZB0 460 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 NLGN1Q8N2Q7 840 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 FNIP1Q8TF40 1166 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 SPATA25Q9BR10 227 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 BRMS1Q9HCU9 246 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 SUSD2Q9UGT4 822 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 CNOT11Q9UKZ1 510 aaKnown RBP6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 PCDHB14Q9Y5E9 798 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 HCFC2Q9Y5Z7 792 aa6.59□□□□□ -1.35
PIKFYVE-209ENST00000477200 SUPT5HO00267 1087 aaKnown RBP6.58□□□□□ -1.36
PIKFYVE-209ENST00000477200 CLEC3AO75596 197 aa6.58□□□□□ -1.36
PIKFYVE-209ENST00000477200 ATE1O95260 518 aa6.58□□□□□ -1.36
PIKFYVE-209ENST00000477200 NT5DC1Q5TFE4 455 aa6.58□□□□□ -1.36
PIKFYVE-209ENST00000477200 TMC4Q7Z404 712 aa6.58□□□□□ -1.36
PIKFYVE-209ENST00000477200 CNNM2Q9H8M5 875 aa6.58□□□□□ -1.36
PIKFYVE-209ENST00000477200 GFOD1Q9NXC2 390 aa6.58□□□□□ -1.36
PIKFYVE-209ENST00000477200 EIF5BO60841 1220 aaKnown RBP6.57□□□□□ -1.36
PIKFYVE-209ENST00000477200 ATF2P15336 505 aa6.57□□□□□ -1.36
PIKFYVE-209ENST00000477200 ENDOUP21128 410 aaKnown RBP6.57□□□□□ -1.36
PIKFYVE-209ENST00000477200 FOXO4P98177 505 aa6.57□□□□□ -1.36
PIKFYVE-209ENST00000477200 RTP2Q5QGT7 225 aa6.57□□□□□ -1.36
PIKFYVE-209ENST00000477200 CRTC3Q6UUV7 619 aa6.57□□□□□ -1.36
PIKFYVE-209ENST00000477200 TMEM192Q8IY95 271 aa6.57□□□□□ -1.36
PIKFYVE-209ENST00000477200 ZNF526Q8TF50 670 aaPredicted RBP6.57□□□□□ -1.36
PIKFYVE-209ENST00000477200 ATG4CQ96DT6 458 aa6.57□□□□□ -1.36
PIKFYVE-209ENST00000477200 EAF1Q96JC9 268 aaPredicted RBP6.57□□□□□ -1.36
PIKFYVE-209ENST00000477200 AKAP8O43823 692 aaKnown RBP6.56□□□□□ -1.36
PIKFYVE-209ENST00000477200 MAGEA10P43363 369 aaPredicted RBP6.56□□□□□ -1.36
PIKFYVE-209ENST00000477200 PWP1Q13610 501 aa6.56□□□□□ -1.36
PIKFYVE-209ENST00000477200 TARBP2Q15633 366 aaKnown RBP6.56□□□□□ -1.36
PIKFYVE-209ENST00000477200 ZNF827Q17R98 1081 aa6.56□□□□□ -1.36
PIKFYVE-209ENST00000477200 CWF19L2Q2TBE0 894 aaKnown RBP6.56□□□□□ -1.36
PIKFYVE-209ENST00000477200 FBXL19Q6PCT2 694 aa6.56□□□□□ -1.36
PIKFYVE-209ENST00000477200 SAPCD2Q86UD0 394 aa6.56□□□□□ -1.36
PIKFYVE-209ENST00000477200 CRELD1Q96HD1 420 aa6.56□□□□□ -1.36
PIKFYVE-209ENST00000477200 KRTAP9-8Q9BYQ0 159 aa6.56□□□□□ -1.36
PIKFYVE-209ENST00000477200 USP40Q9NVE5 1235 aa6.56□□□□□ -1.36
PIKFYVE-209ENST00000477200 DUSP10Q9Y6W6 482 aa6.56□□□□□ -1.36
PIKFYVE-209ENST00000477200 DBHP09172 617 aa6.55□□□□□ -1.36
PIKFYVE-209ENST00000477200 HTRA3P83110 453 aa6.55□□□□□ -1.36
PIKFYVE-209ENST00000477200 XPCQ01831 940 aaPredicted RBP6.55□□□□□ -1.36
PIKFYVE-209ENST00000477200 DLX2Q07687 328 aaPredicted RBP6.55□□□□□ -1.36
PIKFYVE-209ENST00000477200 LRRC3Q9BY71 257 aa6.55□□□□□ -1.36
PIKFYVE-209ENST00000477200 FBXL21Q9UKT6 434 aa6.55□□□□□ -1.36
PIKFYVE-209ENST00000477200 PALD1Q9ULE6 856 aa6.55□□□□□ -1.36
PIKFYVE-209ENST00000477200 PMF1-BGLAPU3KQ54 211 aa6.55□□□□□ -1.36
PIKFYVE-209ENST00000477200 SH3D21A4FU49 640 aa6.54□□□□□ -1.36
PIKFYVE-209ENST00000477200 TNFRSF1AP19438 455 aa6.54□□□□□ -1.36
PIKFYVE-209ENST00000477200 ADAM17P78536 824 aa6.54□□□□□ -1.36
PIKFYVE-209ENST00000477200 PAQR3Q6TCH7 311 aa6.54□□□□□ -1.36
PIKFYVE-209ENST00000477200 NLRC3Q7RTR2 1065 aa6.54□□□□□ -1.36
PIKFYVE-209ENST00000477200 MKRN2Q9H000 416 aaKnown RBP6.54□□□□□ -1.36
PIKFYVE-209ENST00000477200 KBTBD4Q9NVX7 518 aa6.54□□□□□ -1.36
PIKFYVE-209ENST00000477200 PCDHB12Q9Y5F1 795 aa6.54□□□□□ -1.36
PIKFYVE-209ENST00000477200 ROBO2Q9HCK4 1378 aa6.54□□□□□ -1.36
PIKFYVE-209ENST00000477200 A0A1W2PQ27 194 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 A0A1W2PQ64 194 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 A0A1W2PQC6 194 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 A0A1W2PQD8 194 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 SRGAP3O43295 1099 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 GREM1O60565 184 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 CCNFP41002 786 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 ZXDAP98168 799 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 AUHQ13825 339 aaKnown RBP6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 AEBP1Q8IUX7 1158 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 DDX1Q92499 740 aaKnown RBP6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 SLC6A18Q96N87 628 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 ANTXR1Q9H6X2 564 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 EHMT1Q9H9B1 1298 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 COPRSQ9NQ92 184 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 KCNQ5Q9NR82 932 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 DCAF1Q9Y4B6 1507 aa6.53□□□□□ -1.36
PIKFYVE-209ENST00000477200 CLSPNQ9HAW4 1339 aa6.52□□□□□ -1.37
PIKFYVE-209ENST00000477200 CCDC180Q9P1Z9 1646 aa6.52□□□□□ -1.37
PIKFYVE-209ENST00000477200 MATN3O15232 486 aa6.52□□□□□ -1.37
PIKFYVE-209ENST00000477200 NOBOXO60393 691 aa6.52□□□□□ -1.37
PIKFYVE-209ENST00000477200 CYBBP04839 570 aa6.52□□□□□ -1.37
PIKFYVE-209ENST00000477200 CNR2P34972 360 aa6.52□□□□□ -1.37
PIKFYVE-209ENST00000477200 MC3RP41968 323 aa6.52□□□□□ -1.37
PIKFYVE-209ENST00000477200 CRKP46108 304 aa6.52□□□□□ -1.37
PIKFYVE-209ENST00000477200 HLA-DQA1Q5Y7H0 255 aa6.52□□□□□ -1.37
PIKFYVE-209ENST00000477200 SLC12A9Q9BXP2 914 aa6.52□□□□□ -1.37
PIKFYVE-209ENST00000477200 PCGF6Q9BYE7 350 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms