RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 SLC39A5Q6ZMH5 540 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 RASGRP2Q7LDG7 609 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 TBC1D10CQ8IV04 446 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 DCAF4Q8WV16 495 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 FGD4Q96M96 766 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 RNF41Q9H4P4 317 aaPredicted RBP12.74□□□□□ -0.37
SEC13-214ENST00000476597 ACAD9Q9H845 621 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 DIAPH3Q9NSV4 1193 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 PRR12Q9ULL5 1215 aa12.74□□□□□ -0.37
SEC13-214ENST00000476597 MYCNP04198 464 aaPredicted RBP12.73□□□□□ -0.37
SEC13-214ENST00000476597 ADCYAP1R1P41586 468 aa12.73□□□□□ -0.37
SEC13-214ENST00000476597 SNAP25P60880 206 aa12.73□□□□□ -0.37
SEC13-214ENST00000476597 TTBK2Q6IQ55 1244 aa12.73□□□□□ -0.37
SEC13-214ENST00000476597 XPNPEP3Q9NQH7 507 aa12.73□□□□□ -0.37
SEC13-214ENST00000476597 HOMER2Q9NSB8 354 aa12.73□□□□□ -0.37
SEC13-214ENST00000476597 RNF146Q9NTX7 359 aa12.73□□□□□ -0.37
SEC13-214ENST00000476597 FAM184BQ9ULE4 1060 aa12.73□□□□□ -0.37
SEC13-214ENST00000476597 MTMR7Q9Y216 660 aa12.73□□□□□ -0.37
SEC13-214ENST00000476597 POTEB2H3BUK9 544 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 PGK1P00558 417 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 NT5C2P49902 561 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 RTP1P59025 263 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 CNTN2Q02246 1040 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 ACVR2BQ13705 512 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 CCDC96Q2M329 555 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 C1orf53Q5VUE5 145 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 CCDC174Q6PII3 467 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 RNF180Q86T96 592 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 FAM133AQ8N9E0 248 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 ESR2Q92731 530 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 TRERF1Q96PN7 1200 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 DSCC1Q9BVC3 393 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 ABHD16BQ9H3Z7 469 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 A1CFQ9NQ94 594 aaKnown RBP12.72□□□□□ -0.37
SEC13-214ENST00000476597 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.72□□□□□ -0.37
SEC13-214ENST00000476597 PHF24Q9UPV7 400 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 PARP14Q460N5 1801 aa12.72□□□□□ -0.37
SEC13-214ENST00000476597 SOWAHBA6NEL2 793 aa12.71□□□□□ -0.37
SEC13-214ENST00000476597 ADAMTS4O75173 837 aa12.71□□□□□ -0.37
SEC13-214ENST00000476597 ICAM1P05362 532 aa12.71□□□□□ -0.37
SEC13-214ENST00000476597 SNHG28P0DPA3 235 aa12.71□□□□□ -0.37
SEC13-214ENST00000476597 ALAS1P13196 640 aa12.71□□□□□ -0.37
SEC13-214ENST00000476597 SLC16A2P36021 539 aa12.71□□□□□ -0.37
SEC13-214ENST00000476597 IRX6P78412 446 aaPredicted RBP12.71□□□□□ -0.37
SEC13-214ENST00000476597 SNX17Q15036 470 aa12.71□□□□□ -0.37
SEC13-214ENST00000476597 MUM1L1Q5H9M0 696 aa12.71□□□□□ -0.37
SEC13-214ENST00000476597 ARMCX2Q7L311 632 aa12.71□□□□□ -0.37
SEC13-214ENST00000476597 DGKHQ86XP1 1220 aa12.71□□□□□ -0.37
SEC13-214ENST00000476597 FERMT2Q96AC1 680 aa12.71□□□□□ -0.37
SEC13-214ENST00000476597 TSEN34Q9BSV6 310 aaKnown RBP12.71□□□□□ -0.37
SEC13-214ENST00000476597 RANBP17Q9H2T7 1088 aaKnown RBP12.71□□□□□ -0.37
SEC13-214ENST00000476597 ZHX1Q9UKY1 873 aaPredicted RBP12.71□□□□□ -0.37
SEC13-214ENST00000476597 ATP11BQ9Y2G3 1177 aa12.71□□□□□ -0.37
SEC13-214ENST00000476597 NEDD4P46934 1319 aa12.7□□□□□ -0.38
SEC13-214ENST00000476597 SOX1O00570 391 aaPredicted RBP12.7□□□□□ -0.38
SEC13-214ENST00000476597 DUSP11O75319 330 aaKnown RBP12.7□□□□□ -0.38
SEC13-214ENST00000476597 PDHBP11177 359 aa12.7□□□□□ -0.38
SEC13-214ENST00000476597 GSPT1P15170 499 aaKnown RBP12.7□□□□□ -0.38
SEC13-214ENST00000476597 CCDC178Q5BJE1 867 aa12.7□□□□□ -0.38
SEC13-214ENST00000476597 TTC22Q5TAA0 569 aa12.7□□□□□ -0.38
SEC13-214ENST00000476597 SYDE2Q5VT97 1194 aa12.7□□□□□ -0.38
SEC13-214ENST00000476597 CCSAPQ6IQ19 270 aaPredicted RBP12.7□□□□□ -0.38
SEC13-214ENST00000476597 CCDC144CPQ8IYA2 1237 aa12.7□□□□□ -0.38
SEC13-214ENST00000476597 KLHDC9Q8NEP7 349 aa12.7□□□□□ -0.38
SEC13-214ENST00000476597 ANKS1AQ92625 1134 aa12.7□□□□□ -0.38
SEC13-214ENST00000476597 LENG1Q96BZ8 264 aaPredicted RBP12.7□□□□□ -0.38
SEC13-214ENST00000476597 UBE2OQ9C0C9 1292 aaKnown RBP12.7□□□□□ -0.38
SEC13-214ENST00000476597 KATNBL1Q9H079 304 aa12.7□□□□□ -0.38
SEC13-214ENST00000476597 IL25Q9H293 177 aa12.7□□□□□ -0.38
SEC13-214ENST00000476597 GPCPD1Q9NPB8 672 aa12.7□□□□□ -0.38
SEC13-214ENST00000476597 CTNNA3Q9UI47 895 aa12.7□□□□□ -0.38
SEC13-214ENST00000476597 CCPG1Q9ULG6 757 aa12.7□□□□□ -0.38
SEC13-214ENST00000476597 FRMPD2Q68DX3 1309 aaPredicted RBP12.69□□□□□ -0.38
SEC13-214ENST00000476597 ALPK3Q96L96 1907 aa12.69□□□□□ -0.38
SEC13-214ENST00000476597 ASB14A6NK59 587 aa12.69□□□□□ -0.38
SEC13-214ENST00000476597 KDM4AO75164 1064 aa12.69□□□□□ -0.38
SEC13-214ENST00000476597 MDM2Q00987 491 aaPredicted RBP12.69□□□□□ -0.38
SEC13-214ENST00000476597 ZNF543Q08ER8 600 aa12.69□□□□□ -0.38
SEC13-214ENST00000476597 IMMTQ16891 758 aaKnown RBP12.69□□□□□ -0.38
SEC13-214ENST00000476597 CCDC144BQ3MJ40 725 aa12.69□□□□□ -0.38
SEC13-214ENST00000476597 LRIT3Q3SXY7 679 aa12.69□□□□□ -0.38
SEC13-214ENST00000476597 TRIM60Q495X7 471 aa12.69□□□□□ -0.38
SEC13-214ENST00000476597 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
SEC13-214ENST00000476597 ZKSCAN3Q9BRR0 538 aa12.69□□□□□ -0.38
SEC13-214ENST00000476597 CYP39A1Q9NYL5 469 aa12.69□□□□□ -0.38
SEC13-214ENST00000476597 PRKAG2Q9UGJ0 569 aa12.69□□□□□ -0.38
SEC13-214ENST00000476597 COL11A1P12107 1806 aaPredicted RBP12.69□□□□□ -0.38
SEC13-214ENST00000476597 LAMA2P24043 3122 aaKnown RBP12.68□□□□□ -0.38
SEC13-214ENST00000476597 SYNRGQ9UMZ2 1314 aa12.68□□□□□ -0.38
SEC13-214ENST00000476597 A0A1W2PQ45 241 aaPredicted RBP12.68□□□□□ -0.38
SEC13-214ENST00000476597 A0A1W2PQY0 241 aa12.68□□□□□ -0.38
SEC13-214ENST00000476597 MOXD2PA6NHM9 499 aa12.68□□□□□ -0.38
SEC13-214ENST00000476597 ADCY6O43306 1168 aa12.68□□□□□ -0.38
SEC13-214ENST00000476597 ACLYP53396 1101 aa12.68□□□□□ -0.38
SEC13-214ENST00000476597 GJA9P57773 515 aa12.68□□□□□ -0.38
SEC13-214ENST00000476597 TLE2Q04725 743 aa12.68□□□□□ -0.38
SEC13-214ENST00000476597 KCNA10Q16322 511 aa12.68□□□□□ -0.38
SEC13-214ENST00000476597 IQCA1Q86XH1 822 aa12.68□□□□□ -0.38
SEC13-214ENST00000476597 LRCH3Q96II8 777 aa12.68□□□□□ -0.38
SEC13-214ENST00000476597 LBHD1Q9BQE6 289 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms