RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 ADAM17P78536 824 aa8.42□□□□□ -1.06
NUP58-209ENST00000476553 ZXDAP98168 799 aa8.42□□□□□ -1.06
NUP58-209ENST00000476553 CYP4F8P98187 520 aa8.42□□□□□ -1.06
NUP58-209ENST00000476553 NUP43Q8NFH3 380 aa8.42□□□□□ -1.06
NUP58-209ENST00000476553 MATN3O15232 486 aa8.41□□□□□ -1.06
NUP58-209ENST00000476553 PF4P02776 101 aa8.41□□□□□ -1.06
NUP58-209ENST00000476553 PLA2G1BP04054 148 aaKnown RBP8.41□□□□□ -1.06
NUP58-209ENST00000476553 PFKLP17858 780 aa8.41□□□□□ -1.06
NUP58-209ENST00000476553 ZNF200P98182 395 aaPredicted RBP8.41□□□□□ -1.06
NUP58-209ENST00000476553 DHX37Q8IY37 1157 aaKnown RBP8.41□□□□□ -1.06
NUP58-209ENST00000476553 CRELD1Q96HD1 420 aa8.41□□□□□ -1.06
NUP58-209ENST00000476553 DUSP9Q99956 384 aaKnown RBP8.41□□□□□ -1.06
NUP58-209ENST00000476553 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.41□□□□□ -1.06
NUP58-209ENST00000476553 HTRA3P83110 453 aa8.4□□□□□ -1.06
NUP58-209ENST00000476553 TAF1CQ15572 869 aaPredicted RBP8.4□□□□□ -1.06
NUP58-209ENST00000476553 NT5DC1Q5TFE4 455 aa8.4□□□□□ -1.06
NUP58-209ENST00000476553 ZC3H14Q6PJT7 736 aaKnown RBP8.4□□□□□ -1.06
NUP58-209ENST00000476553 REC114Q7Z4M0 266 aa8.4□□□□□ -1.06
NUP58-209ENST00000476553 FNIP1Q8TF40 1166 aa8.4□□□□□ -1.06
NUP58-209ENST00000476553 SPATA25Q9BR10 227 aa8.4□□□□□ -1.06
NUP58-209ENST00000476553 USP40Q9NVE5 1235 aa8.4□□□□□ -1.06
NUP58-209ENST00000476553 IMPACTQ9P2X3 320 aa8.4□□□□□ -1.06
NUP58-209ENST00000476553 ZNF205O95201 554 aa8.39□□□□□ -1.07
NUP58-209ENST00000476553 NR1I3Q14994 352 aa8.39□□□□□ -1.07
NUP58-209ENST00000476553 SAPCD2Q86UD0 394 aa8.39□□□□□ -1.07
NUP58-209ENST00000476553 FERMT3Q86UX7 667 aa8.39□□□□□ -1.07
NUP58-209ENST00000476553 ADGRG2Q8IZP9 1017 aa8.39□□□□□ -1.07
NUP58-209ENST00000476553 EAF1Q96JC9 268 aaPredicted RBP8.39□□□□□ -1.07
NUP58-209ENST00000476553 KRTAP3-1Q9BYR8 98 aa8.39□□□□□ -1.07
NUP58-209ENST00000476553 PRDM14Q9GZV8 571 aa8.39□□□□□ -1.07
NUP58-209ENST00000476553 MINPP1Q9UNW1 487 aa8.39□□□□□ -1.07
NUP58-209ENST00000476553 A0A1B0GTL3 188 aa8.38□□□□□ -1.07
NUP58-209ENST00000476553 SH3D21A4FU49 640 aa8.38□□□□□ -1.07
NUP58-209ENST00000476553 F6X3S4 739 aa8.38□□□□□ -1.07
NUP58-209ENST00000476553 MPP2Q14168 576 aa8.38□□□□□ -1.07
NUP58-209ENST00000476553 ARSHQ5FYA8 562 aa8.38□□□□□ -1.07
NUP58-209ENST00000476553 KIAA1522Q9P206 1035 aaPredicted RBP8.38□□□□□ -1.07
NUP58-209ENST00000476553 SUSD2Q9UGT4 822 aa8.38□□□□□ -1.07
NUP58-209ENST00000476553 BMP8BP34820 402 aa8.37□□□□□ -1.07
NUP58-209ENST00000476553 DLX2Q07687 328 aaPredicted RBP8.37□□□□□ -1.07
NUP58-209ENST00000476553 TARBP2Q15633 366 aaKnown RBP8.37□□□□□ -1.07
NUP58-209ENST00000476553 LSRQ86X29 649 aaPredicted RBP8.37□□□□□ -1.07
NUP58-209ENST00000476553 MRRFQ96E11 262 aaKnown RBP8.37□□□□□ -1.07
NUP58-209ENST00000476553 JMJD8Q96S16 334 aa8.37□□□□□ -1.07
NUP58-209ENST00000476553 CHST7Q9NS84 486 aa8.37□□□□□ -1.07
NUP58-209ENST00000476553 C1QTNF3-AMACRE9PGA6 284 aa8.36□□□□□ -1.07
NUP58-209ENST00000476553 SRGAP3O43295 1099 aa8.36□□□□□ -1.07
NUP58-209ENST00000476553 ITGB3P05106 788 aa8.36□□□□□ -1.07
NUP58-209ENST00000476553 RAG1P15918 1043 aa8.36□□□□□ -1.07
NUP58-209ENST00000476553 CTSKP43235 329 aa8.36□□□□□ -1.07
NUP58-209ENST00000476553 TMEM52Q8NDY8 209 aa8.36□□□□□ -1.07
NUP58-209ENST00000476553 SPATA32Q96LK8 384 aa8.36□□□□□ -1.07
NUP58-209ENST00000476553 DRC1Q96MC2 740 aa8.36□□□□□ -1.07
NUP58-209ENST00000476553 CDADC1Q9BWV3 514 aa8.36□□□□□ -1.07
NUP58-209ENST00000476553 SMPD4Q9NXE4 827 aa8.36□□□□□ -1.07
NUP58-209ENST00000476553 PLA2G2DQ9UNK4 145 aa8.36□□□□□ -1.07
NUP58-209ENST00000476553 DUSP10Q9Y6W6 482 aa8.36□□□□□ -1.07
NUP58-209ENST00000476553 USP31Q70CQ4 1352 aa8.35□□□□□ -1.07
NUP58-209ENST00000476553 CTSHP09668 335 aa8.35□□□□□ -1.07
NUP58-209ENST00000476553 RAD51AP2Q09MP3 1159 aa8.35□□□□□ -1.07
NUP58-209ENST00000476553 GMIPQ9P107 970 aa8.35□□□□□ -1.07
NUP58-209ENST00000476553 PMF1-BGLAPU3KQ54 211 aa8.35□□□□□ -1.07
NUP58-209ENST00000476553 SMARCA5O60264 1052 aaPredicted RBP8.34□□□□□ -1.07
NUP58-209ENST00000476553 POLR2BP30876 1174 aaKnown RBP8.34□□□□□ -1.07
NUP58-209ENST00000476553 MVKQ03426 396 aa8.34□□□□□ -1.07
NUP58-209ENST00000476553 TMEM74Q96NL1 305 aa8.34□□□□□ -1.07
NUP58-209ENST00000476553 RBM15Q96T37 977 aaKnown RBP eCLIP8.34□□□□□ -1.07
NUP58-209ENST00000476553 SRRDQ9UH36 339 aa8.34□□□□□ -1.07
NUP58-209ENST00000476553 NOBOXO60393 691 aa8.33□□□□□ -1.08
NUP58-209ENST00000476553 DBHP09172 617 aa8.33□□□□□ -1.08
NUP58-209ENST00000476553 ATF2P15336 505 aa8.33□□□□□ -1.08
NUP58-209ENST00000476553 ERCC3P19447 782 aa8.33□□□□□ -1.08
NUP58-209ENST00000476553 CNR2P34972 360 aa8.33□□□□□ -1.08
NUP58-209ENST00000476553 FOXO4P98177 505 aa8.33□□□□□ -1.08
NUP58-209ENST00000476553 MLECQ14165 292 aa8.33□□□□□ -1.08
NUP58-209ENST00000476553 SLC16A11Q8NCK7 471 aa8.33□□□□□ -1.08
NUP58-209ENST00000476553 FBXO27Q8NI29 283 aa8.33□□□□□ -1.08
NUP58-209ENST00000476553 ZNF526Q8TF50 670 aaPredicted RBP8.33□□□□□ -1.08
NUP58-209ENST00000476553 LNPKQ9C0E8 428 aa8.33□□□□□ -1.08
NUP58-209ENST00000476553 RNF38Q9H0F5 515 aa8.33□□□□□ -1.08
NUP58-209ENST00000476553 AP5S1Q9NUS5 200 aa8.33□□□□□ -1.08
NUP58-209ENST00000476553 CYBBP04839 570 aa8.32□□□□□ -1.08
NUP58-209ENST00000476553 GARTP22102 1010 aa8.32□□□□□ -1.08
NUP58-209ENST00000476553 CDCP2Q5VXM1 449 aa8.32□□□□□ -1.08
NUP58-209ENST00000476553 OVOS1Q6IE37 1185 aa8.32□□□□□ -1.08
NUP58-209ENST00000476553 PAQR3Q6TCH7 311 aa8.32□□□□□ -1.08
NUP58-209ENST00000476553 SREK1Q8WXA9 508 aaKnown RBP8.32□□□□□ -1.08
NUP58-209ENST00000476553 C8orf37Q96NL8 207 aa8.32□□□□□ -1.08
NUP58-209ENST00000476553 C1QTNF3Q9BXJ4 246 aa8.32□□□□□ -1.08
NUP58-209ENST00000476553 HCFC2Q9Y5Z7 792 aa8.32□□□□□ -1.08
NUP58-209ENST00000476553 VAV1P15498 845 aa8.31□□□□□ -1.08
NUP58-209ENST00000476553 NCLP19338 710 aaKnown RBP8.31□□□□□ -1.08
NUP58-209ENST00000476553 FAM160A1Q05DH4 1040 aa8.31□□□□□ -1.08
NUP58-209ENST00000476553 KRTAP1-1Q07627 177 aa8.31□□□□□ -1.08
NUP58-209ENST00000476553 RTP2Q5QGT7 225 aa8.31□□□□□ -1.08
NUP58-209ENST00000476553 SNAP47Q5SQN1 464 aa8.31□□□□□ -1.08
NUP58-209ENST00000476553 CRTC3Q6UUV7 619 aa8.31□□□□□ -1.08
NUP58-209ENST00000476553 FAM196AQ6ZSG2 479 aa8.31□□□□□ -1.08
NUP58-209ENST00000476553 ZNF512BQ96KM6 892 aaPredicted RBP8.31□□□□□ -1.08
NUP58-209ENST00000476553 GFOD1Q9NXC2 390 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms