RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 CCDC174Q6PII3 467 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 BTNL9Q6UXG8 535 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 MICU3Q86XE3 530 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 NCAPG2Q86XI2 1143 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 CCDC144CPQ8IYA2 1237 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 COA7Q96BR5 231 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 MCOLN1Q9GZU1 580 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 UBA5Q9GZZ9 404 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 SLC38A10Q9HBR0 1119 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 SLC12A7Q9Y666 1083 aa16.77■□□□□ 0.27
CCNL1-217ENST00000476367 ZNFX1Q9P2E3 1918 aaKnown RBP16.76■□□□□ 0.27
CCNL1-217ENST00000476367 DHX16O60231 1041 aaKnown RBP16.76■□□□□ 0.27
CCNL1-217ENST00000476367 ERCC3P19447 782 aa16.76■□□□□ 0.27
CCNL1-217ENST00000476367 GPR142Q7Z601 462 aa16.76■□□□□ 0.27
CCNL1-217ENST00000476367 FANCBQ8NB91 859 aa16.76■□□□□ 0.27
CCNL1-217ENST00000476367 TEX13BQ9BXU2 312 aa16.76■□□□□ 0.27
CCNL1-217ENST00000476367 SRRDQ9UH36 339 aa16.76■□□□□ 0.27
CCNL1-217ENST00000476367 GABRQQ9UN88 632 aa16.76■□□□□ 0.27
CCNL1-217ENST00000476367 ZNF236Q9UL36 1845 aa16.75■□□□□ 0.27
CCNL1-217ENST00000476367 DTNBO60941 627 aa16.75■□□□□ 0.27
CCNL1-217ENST00000476367 PLEKHA8P1O95397 391 aa16.75■□□□□ 0.27
CCNL1-217ENST00000476367 GNRH1P01148 92 aa16.75■□□□□ 0.27
CCNL1-217ENST00000476367 ADD1P35611 737 aaKnown RBP16.75■□□□□ 0.27
CCNL1-217ENST00000476367 STAT3P40763 770 aa16.75■□□□□ 0.27
CCNL1-217ENST00000476367 NTRK3Q16288 839 aa16.75■□□□□ 0.27
CCNL1-217ENST00000476367 NOL8Q76FK4 1167 aaKnown RBP16.75■□□□□ 0.27
CCNL1-217ENST00000476367 CMTR1Q8N1G2 835 aaKnown RBP16.75■□□□□ 0.27
CCNL1-217ENST00000476367 SRBD1Q8N5C6 995 aaKnown RBP16.75■□□□□ 0.27
CCNL1-217ENST00000476367 ZNF274Q96GC6 653 aaPredicted RBP16.75■□□□□ 0.27
CCNL1-217ENST00000476367 NCOA5Q9HCD5 579 aaKnown RBP16.75■□□□□ 0.27
CCNL1-217ENST00000476367 PTCH2Q9Y6C5 1203 aa16.75■□□□□ 0.27
CCNL1-217ENST00000476367 IVNS1ABPQ9Y6Y0 642 aa16.75■□□□□ 0.27
CCNL1-217ENST00000476367 ZBTB43O43298 467 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 TAL1P17542 331 aaPredicted RBP16.74■□□□□ 0.27
CCNL1-217ENST00000476367 HOXD10P28358 340 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 RCAN1P53805 252 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 PLEKHH3Q7Z736 793 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 RIOX2Q8IUF8 465 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 TNS4Q8IZW8 715 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 HOMER2Q9NSB8 354 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 NAP1L2Q9ULW6 460 aaPredicted RBP16.74■□□□□ 0.27
CCNL1-217ENST00000476367 PTPN22Q9Y2R2 807 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 PLXNA1Q9UIW2 1896 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 GOLGA8BA8MQT2 603 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 KLRF2D3W0D1 207 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 FDX1P10109 184 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 FLT3LGP49771 235 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 SCRN1Q12765 414 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 FBXO46Q6PJ61 603 aaPredicted RBP16.74■□□□□ 0.27
CCNL1-217ENST00000476367 SHCBP1Q8NEM2 672 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
CCNL1-217ENST00000476367 MTMR8Q96EF0 704 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 AGBL1Q96MI9 1066 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 RANBP17Q9H2T7 1088 aaKnown RBP16.74■□□□□ 0.27
CCNL1-217ENST00000476367 RIPK3Q9Y572 518 aa16.74■□□□□ 0.27
CCNL1-217ENST00000476367 RBBP6Q7Z6E9 1792 aaKnown RBP16.73■□□□□ 0.27
CCNL1-217ENST00000476367 ZNF536O15090 1300 aa16.73■□□□□ 0.27
CCNL1-217ENST00000476367 PFKFB2O60825 505 aa16.73■□□□□ 0.27
CCNL1-217ENST00000476367 SLC25A27O95847 323 aa16.73■□□□□ 0.27
CCNL1-217ENST00000476367 OAZ1P54368 228 aa16.73■□□□□ 0.27
CCNL1-217ENST00000476367 CCT2P78371 535 aaKnown RBP16.73■□□□□ 0.27
CCNL1-217ENST00000476367 PKN2Q16513 984 aaKnown RBP16.73■□□□□ 0.27
CCNL1-217ENST00000476367 ADGRF4Q8IZF3 695 aa16.73■□□□□ 0.27
CCNL1-217ENST00000476367 RAET1EQ8TD07 263 aa16.73■□□□□ 0.27
CCNL1-217ENST00000476367 MROH8Q9H579 483 aa16.73■□□□□ 0.27
CCNL1-217ENST00000476367 RIOX1Q9H6W3 641 aa16.73■□□□□ 0.27
CCNL1-217ENST00000476367 VAT1LQ9HCJ6 419 aa16.73■□□□□ 0.27
CCNL1-217ENST00000476367 CCPG1Q9ULG6 757 aa16.73■□□□□ 0.27
CCNL1-217ENST00000476367 ATP2A1O14983 1001 aa16.72■□□□□ 0.27
CCNL1-217ENST00000476367 CTDNEP1O95476 244 aa16.72■□□□□ 0.27
CCNL1-217ENST00000476367 ALAS1P13196 640 aa16.72■□□□□ 0.27
CCNL1-217ENST00000476367 STK3Q13188 491 aa16.72■□□□□ 0.27
CCNL1-217ENST00000476367 ANKRD1Q15327 319 aa16.72■□□□□ 0.27
CCNL1-217ENST00000476367 CDC37Q16543 378 aaPredicted RBP16.72■□□□□ 0.27
CCNL1-217ENST00000476367 SYNE3Q6ZMZ3 975 aa16.72■□□□□ 0.27
CCNL1-217ENST00000476367 TMTC3Q6ZXV5 915 aa16.72■□□□□ 0.27
CCNL1-217ENST00000476367 NECAB1Q8N987 351 aa16.72■□□□□ 0.27
CCNL1-217ENST00000476367 SOCS4Q8WXH5 440 aa16.72■□□□□ 0.27
CCNL1-217ENST00000476367 NUDT12Q9BQG2 462 aa16.72■□□□□ 0.27
CCNL1-217ENST00000476367 JMJD4Q9H9V9 463 aa16.72■□□□□ 0.27
CCNL1-217ENST00000476367 LIMCH1Q9UPQ0 1083 aa16.72■□□□□ 0.27
CCNL1-217ENST00000476367 GOLGA8AA7E2F4 631 aa16.71■□□□□ 0.27
CCNL1-217ENST00000476367 CALM1P0DP23 149 aa16.71■□□□□ 0.27
CCNL1-217ENST00000476367 CALM2P0DP24 149 aa16.71■□□□□ 0.27
CCNL1-217ENST00000476367 CALM3P0DP25 149 aa16.71■□□□□ 0.27
CCNL1-217ENST00000476367 KIF5BP33176 963 aa16.71■□□□□ 0.27
CCNL1-217ENST00000476367 COPB2P35606 906 aa16.71■□□□□ 0.27
CCNL1-217ENST00000476367 METAP2P50579 478 aaKnown RBP eCLIP16.71■□□□□ 0.27
CCNL1-217ENST00000476367 PRMT2P55345 433 aa16.71■□□□□ 0.27
CCNL1-217ENST00000476367 CNTNAP5Q8WYK1 1306 aa16.71■□□□□ 0.27
CCNL1-217ENST00000476367 PPP1R11O60927 126 aaPredicted RBP16.7■□□□□ 0.26
CCNL1-217ENST00000476367 ICAM1P05362 532 aa16.7■□□□□ 0.26
CCNL1-217ENST00000476367 CYP2B6P20813 491 aa16.7■□□□□ 0.26
CCNL1-217ENST00000476367 PTPREP23469 700 aa16.7■□□□□ 0.26
CCNL1-217ENST00000476367 GRB14Q14449 540 aa16.7■□□□□ 0.26
CCNL1-217ENST00000476367 RTN1Q16799 776 aa16.7■□□□□ 0.26
CCNL1-217ENST00000476367 USH1GQ495M9 461 aa16.7■□□□□ 0.26
CCNL1-217ENST00000476367 HOMER1Q86YM7 354 aa16.7■□□□□ 0.26
CCNL1-217ENST00000476367 SPZ1Q9BXG8 430 aa16.7■□□□□ 0.26
CCNL1-217ENST00000476367 RNF146Q9NTX7 359 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms