RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 SYCP1Q15431 976 aa15.91■□□□□ 0.14
UBXN11-214ENST00000475591 ELF2Q15723 593 aa15.91■□□□□ 0.14
UBXN11-214ENST00000475591 CT47A1Q5JQC4 288 aaPredicted RBP15.91■□□□□ 0.14
UBXN11-214ENST00000475591 ZNF658Q5TYW1 1059 aaPredicted RBP15.91■□□□□ 0.14
UBXN11-214ENST00000475591 GALNT17Q6IS24 598 aa15.91■□□□□ 0.14
UBXN11-214ENST00000475591 VPS16Q9H269 839 aa15.91■□□□□ 0.14
UBXN11-214ENST00000475591 TTF2Q9UNY4 1162 aaKnown RBP15.91■□□□□ 0.14
UBXN11-214ENST00000475591 ANKRD31Q8N7Z5 1873 aa15.91■□□□□ 0.14
UBXN11-214ENST00000475591 LRRC37AA6NMS7 1700 aa15.91■□□□□ 0.14
UBXN11-214ENST00000475591 SPDYE4A6NLX3 237 aa15.91■□□□□ 0.14
UBXN11-214ENST00000475591 STX10O60499 249 aa15.91■□□□□ 0.14
UBXN11-214ENST00000475591 UBA7P41226 1012 aa15.91■□□□□ 0.14
UBXN11-214ENST00000475591 COA7Q96BR5 231 aa15.91■□□□□ 0.14
UBXN11-214ENST00000475591 L2HGDHQ9H9P8 463 aa15.91■□□□□ 0.14
UBXN11-214ENST00000475591 TAB2Q9NYJ8 693 aa15.91■□□□□ 0.14
UBXN11-214ENST00000475591 SEC63Q9UGP8 760 aaKnown RBP15.91■□□□□ 0.14
UBXN11-214ENST00000475591 A0A0U1RQJ8 604 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 AKR1B15C9JRZ8 316 aaPredicted RBP15.9■□□□□ 0.14
UBXN11-214ENST00000475591 PMS1P54277 932 aaKnown RBP15.9■□□□□ 0.14
UBXN11-214ENST00000475591 GABPAQ06546 454 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 NONOQ15233 471 aaKnown RBP eCLIP15.9■□□□□ 0.14
UBXN11-214ENST00000475591 CCDC93Q567U6 631 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 TBCKQ8TEA7 893 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 ATRIPQ8WXE1 791 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 PYM1Q9BRP8 204 aaKnown RBP15.9■□□□□ 0.14
UBXN11-214ENST00000475591 GPCPD1Q9NPB8 672 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 KCNQ5Q9NR82 932 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 MTMR4Q9NYA4 1195 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 RWDD2AQ9UIY3 292 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 BRWD3Q6RI45 1802 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 SRGNP10124 158 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 KMT5BQ4FZB7 885 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 FCHSD1Q86WN1 690 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 ERO1AQ96HE7 468 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 ZC3H12CQ9C0D7 883 aaKnown RBP15.9■□□□□ 0.14
UBXN11-214ENST00000475591 COA1Q9GZY4 146 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 C6orf50Q9HD87 102 aa15.9■□□□□ 0.14
UBXN11-214ENST00000475591 CCP110O43303 1012 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 KLRC4O43908 158 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 PLCG1P19174 1290 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 CASP14P31944 242 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 NOVP48745 357 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 CBX1P83916 185 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 KRT25Q7Z3Z0 450 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 COL23A1Q86Y22 540 aaPredicted RBP15.89■□□□□ 0.13
UBXN11-214ENST00000475591 USP40Q9NVE5 1235 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 PCDHAC2Q9Y5I4 1007 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 ZSCAN12O43309 604 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 GYPCP04921 128 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 OR52Z1P0C646 297 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 FXR1P51114 621 aaKnown RBP eCLIP15.89■□□□□ 0.13
UBXN11-214ENST00000475591 SOGA3Q5TF21 947 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 RAD9BQ6WBX8 426 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 POTEDQ86YR6 584 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 WDR24Q96S15 920 aa15.89■□□□□ 0.13
UBXN11-214ENST00000475591 RNF225M0QZC1 329 aaPredicted RBP15.88■□□□□ 0.13
UBXN11-214ENST00000475591 TECP42680 631 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 NEK8Q86SG6 692 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 CABP7Q86V35 215 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 PPFIBP1Q86W92 1011 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 CCDC12Q8WUD4 166 aaPredicted RBP15.88■□□□□ 0.13
UBXN11-214ENST00000475591 EEF2KMTQ96G04 330 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 CCSER1Q9C0I3 900 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 RIOX1Q9H6W3 641 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 MRPL44Q9H9J2 332 aaKnown RBP15.88■□□□□ 0.13
UBXN11-214ENST00000475591 RMND1Q9NWS8 449 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 PHLPP2Q6ZVD8 1323 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 FOCADQ5VW36 1801 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 KCNJ18B7U540 433 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 N4BP3O15049 544 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 GNA11P29992 359 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 COPB1P53618 953 aaKnown RBP15.88■□□□□ 0.13
UBXN11-214ENST00000475591 NFIAQ12857 509 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 KCNJ12Q14500 433 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 ERCC6LQ2NKX8 1250 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 FILIP1LQ4L180 1135 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 TCP11X2Q5H9J9 407 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 MSL1Q68DK7 614 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 TTBK2Q6IQ55 1244 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 ZFPM1Q8IX07 1006 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 CTAGE1Q96RT6 745 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 KBTBD4Q9NVX7 518 aa15.88■□□□□ 0.13
UBXN11-214ENST00000475591 LIMA1Q9UHB6 759 aaKnown RBP15.88■□□□□ 0.13
UBXN11-214ENST00000475591 MFAP3LO75121 409 aa15.87■□□□□ 0.13
UBXN11-214ENST00000475591 URI1O94763 535 aaPredicted RBP15.87■□□□□ 0.13
UBXN11-214ENST00000475591 PRPHP41219 470 aa15.87■□□□□ 0.13
UBXN11-214ENST00000475591 CACNB3P54284 484 aa15.87■□□□□ 0.13
UBXN11-214ENST00000475591 SHROOM1Q2M3G4 852 aaPredicted RBP15.87■□□□□ 0.13
UBXN11-214ENST00000475591 IRF2BP1Q8IU81 584 aa15.87■□□□□ 0.13
UBXN11-214ENST00000475591 ADSSL1Q8N142 457 aa15.87■□□□□ 0.13
UBXN11-214ENST00000475591 REXO1Q8N1G1 1221 aaKnown RBP15.87■□□□□ 0.13
UBXN11-214ENST00000475591 IRX2Q9BZI1 471 aaPredicted RBP15.87■□□□□ 0.13
UBXN11-214ENST00000475591 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.87■□□□□ 0.134e-6■■■■□ 22
UBXN11-214ENST00000475591 IGKV6D-41A0A0C4DH26 115 aa15.87■□□□□ 0.13
UBXN11-214ENST00000475591 FAM196BA6NMK8 535 aa15.87■□□□□ 0.13
UBXN11-214ENST00000475591 GNG11P61952 73 aa15.87■□□□□ 0.13
UBXN11-214ENST00000475591 ATP2B2Q01814 1243 aa15.87■□□□□ 0.13
UBXN11-214ENST00000475591 CDC42EP5Q6NZY7 148 aa15.87■□□□□ 0.13
UBXN11-214ENST00000475591 PANX2Q96RD6 677 aa15.87■□□□□ 0.13
UBXN11-214ENST00000475591 DBNDD1Q9H9R9 158 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms