RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 CABS1Q96KC9 395 aa19.82■□□□□ 0.76
CCM2-207ENST00000475551 CCDC85AQ96PX6 553 aaPredicted RBP19.82■□□□□ 0.76
CCM2-207ENST00000475551 PAGR1Q9BTK6 254 aa19.82■□□□□ 0.76
CCM2-207ENST00000475551 NUP58Q9BVL2 599 aa19.82■□□□□ 0.76
CCM2-207ENST00000475551 TTYH3Q9C0H2 523 aa19.82■□□□□ 0.76
CCM2-207ENST00000475551 NHEJ1Q9H9Q4 299 aaPredicted RBP19.82■□□□□ 0.76
CCM2-207ENST00000475551 ZNHIT6Q9NWK9 470 aaKnown RBP19.82■□□□□ 0.76
CCM2-207ENST00000475551 CAPN7Q9Y6W3 813 aa19.82■□□□□ 0.76
CCM2-207ENST00000475551 NDUFAB1O14561 156 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 PCCAP05165 728 aaPredicted RBP19.81■□□□□ 0.76
CCM2-207ENST00000475551 TNFRSF8P28908 595 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 PSEN1P49768 467 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 DNM2P50570 870 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 SETQ01105 290 aaPredicted RBP19.81■□□□□ 0.76
CCM2-207ENST00000475551 TRIM28Q13263 835 aaKnown RBP19.81■□□□□ 0.76
CCM2-207ENST00000475551 ZNF174Q15697 407 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 TTMPQ5BVD1 217 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 RRP12Q5JTH9 1297 aaKnown RBP19.81■□□□□ 0.76
CCM2-207ENST00000475551 TTC38Q5R3I4 469 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 SECISBP2LQ93073 1101 aaKnown RBP19.81■□□□□ 0.76
CCM2-207ENST00000475551 CAVIN3Q969G5 261 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 LRRC1Q9BTT6 524 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 THAP9Q9H5L6 903 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 DMGDHQ9UI17 866 aaKnown RBP19.81■□□□□ 0.76
CCM2-207ENST00000475551 SAMM50Q9Y512 469 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 GSG1L2A8MUP6 293 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 UQCRFS1P1P0C7P4 283 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 PTGDRQ13258 359 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 ADSSL1Q8N142 457 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 RETREG2Q8NC44 543 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 RABEP2Q9H5N1 569 aa19.81■□□□□ 0.76
CCM2-207ENST00000475551 SHANK3Q9BYB0 1731 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 MEFVO15553 781 aaPredicted RBP19.8■□□□□ 0.76
CCM2-207ENST00000475551 HSF2BPO75031 334 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 KIAA0754O94854 1291 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 MBD4O95243 580 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 VAV2P52735 878 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 KIF5AQ12840 1032 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 LDHAL6AQ6ZMR3 332 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 TRIM58Q8NG06 486 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 TTLL11Q8NHH1 800 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 HDAC7Q8WUI4 952 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 TNFRSF25Q93038 417 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 ARL8AQ96BM9 186 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 RUFY1Q96T51 708 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 GDAQ9Y2T3 454 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 A0A0G2JS52 829 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 SRGNP10124 158 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 CDK17Q00537 523 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 EZH2Q15910 746 aaKnown RBP19.8■□□□□ 0.76
CCM2-207ENST00000475551 YTHDF3Q7Z739 585 aaKnown RBP19.8■□□□□ 0.76
CCM2-207ENST00000475551 OTUD6BQ8N6M0 293 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 VGLL2Q8N8G2 317 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 SPATA4Q8NEY3 305 aa19.8■□□□□ 0.76
CCM2-207ENST00000475551 TACO1Q9BSH4 297 aaKnown RBP19.8■□□□□ 0.76
CCM2-207ENST00000475551 PCDH11XQ9BZA7 1347 aa19.79■□□□□ 0.76
CCM2-207ENST00000475551 PCDH11YQ9BZA8 1340 aa19.79■□□□□ 0.76
CCM2-207ENST00000475551 PRPF3O43395 683 aaKnown RBP19.79■□□□□ 0.76
CCM2-207ENST00000475551 NNTQ13423 1086 aa19.79■□□□□ 0.76
CCM2-207ENST00000475551 TSEN2Q8NCE0 465 aaKnown RBP19.79■□□□□ 0.76
CCM2-207ENST00000475551 DUSP10Q9Y6W6 482 aa19.79■□□□□ 0.76
CCM2-207ENST00000475551 CCDC172P0C7W6 258 aa19.79■□□□□ 0.76
CCM2-207ENST00000475551 ZBED6P86452 979 aa19.79■□□□□ 0.76
CCM2-207ENST00000475551 TTC19Q6DKK2 380 aaPredicted RBP19.79■□□□□ 0.76
CCM2-207ENST00000475551 CDCA7Q9BWT1 371 aaPredicted RBP19.79■□□□□ 0.76
CCM2-207ENST00000475551 MACROD2A1Z1Q3 448 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 PHKA1P46020 1223 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 EMC10Q5UCC4 262 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 ZNF772Q68DY9 489 aaPredicted RBP19.78■□□□□ 0.76
CCM2-207ENST00000475551 MICALCLQ6ZW33 695 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 FAM89AQ96GI7 184 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 RNF41Q9H4P4 317 aaPredicted RBP19.78■□□□□ 0.76
CCM2-207ENST00000475551 ARMT1Q9H993 441 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 AGPAT5Q9NUQ2 364 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 MAPK8IP1Q9UQF2 711 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 RTL9Q8NET4 1388 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 TRIM49BA6NDI0 452 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 FUT2Q10981 343 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 PDCLQ13371 301 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 DDB1Q16531 1140 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 ZBTB38Q8NAP3 1195 aaPredicted RBP19.78■□□□□ 0.76
CCM2-207ENST00000475551 NACAP1Q9BZK3 213 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 DONSONQ9NYP3 566 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 STIM2Q9P246 746 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 MAGEC2Q9UBF1 373 aaPredicted RBP19.78■□□□□ 0.76
CCM2-207ENST00000475551 MYH6P13533 1939 aa19.78■□□□□ 0.76
CCM2-207ENST00000475551 MYH13Q9UKX3 1938 aa19.77■□□□□ 0.76
CCM2-207ENST00000475551 PES1O00541 588 aaKnown RBP19.77■□□□□ 0.76
CCM2-207ENST00000475551 TACC1O75410 805 aa19.77■□□□□ 0.76
CCM2-207ENST00000475551 CLSTN1O94985 981 aa19.77■□□□□ 0.76
CCM2-207ENST00000475551 GNAT2P19087 354 aa19.77■□□□□ 0.76
CCM2-207ENST00000475551 NOC3LQ8WTT2 800 aaKnown RBP19.77■□□□□ 0.76
CCM2-207ENST00000475551 EXOC1Q9NV70 894 aa19.77■□□□□ 0.76
CCM2-207ENST00000475551 RASSF10A6NK89 507 aa19.77■□□□□ 0.75
CCM2-207ENST00000475551 H0YHG0 523 aa19.77■□□□□ 0.75
CCM2-207ENST00000475551 TCP1P17987 556 aaKnown RBP19.77■□□□□ 0.75
CCM2-207ENST00000475551 TRIM21P19474 475 aaKnown RBP19.77■□□□□ 0.75
CCM2-207ENST00000475551 APBA1Q02410 837 aa19.77■□□□□ 0.75
CCM2-207ENST00000475551 MAP3K12Q12852 859 aa19.77■□□□□ 0.75
CCM2-207ENST00000475551 SEC23AQ15436 765 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms