RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 IL25Q9H293 177 aa18.33■□□□□ 0.52
CPSF3-203ENST00000475482 RAVER2Q9HCJ3 691 aaKnown RBP18.33■□□□□ 0.52
CPSF3-203ENST00000475482 COLQQ9Y215 455 aaPredicted RBP18.33■□□□□ 0.52
CPSF3-203ENST00000475482 U3KPZ7 1027 aaPredicted RBP18.33■□□□□ 0.52
CPSF3-203ENST00000475482 EVI5O60447 810 aa18.32■□□□□ 0.52
CPSF3-203ENST00000475482 BTNL9Q6UXG8 535 aa18.32■□□□□ 0.52
CPSF3-203ENST00000475482 MSL3Q8N5Y2 521 aaKnown RBP18.32■□□□□ 0.52
CPSF3-203ENST00000475482 CHST13Q8NET6 341 aa18.32■□□□□ 0.52
CPSF3-203ENST00000475482 TTC14Q96N46 770 aa18.32■□□□□ 0.52
CPSF3-203ENST00000475482 TMEM47Q9BQJ4 181 aa18.32■□□□□ 0.52
CPSF3-203ENST00000475482 TINF2Q9BSI4 451 aa18.32■□□□□ 0.52
CPSF3-203ENST00000475482 RNF41Q9H4P4 317 aaPredicted RBP18.32■□□□□ 0.52
CPSF3-203ENST00000475482 MCM3APO60318 1980 aa18.31■□□□□ 0.52
CPSF3-203ENST00000475482 TOP1P11387 765 aaKnown RBP18.31■□□□□ 0.52
CPSF3-203ENST00000475482 CNGA1P29973 690 aa18.31■□□□□ 0.52
CPSF3-203ENST00000475482 RRP12Q5JTH9 1297 aaKnown RBP18.31■□□□□ 0.52
CPSF3-203ENST00000475482 PRAMEF19Q5SWL8 479 aa18.31■□□□□ 0.52
CPSF3-203ENST00000475482 MAMDC4Q6UXC1 1216 aa18.31■□□□□ 0.52
CPSF3-203ENST00000475482 KCTD1Q719H9 257 aa18.31■□□□□ 0.52
CPSF3-203ENST00000475482 RASGRP2Q7LDG7 609 aa18.31■□□□□ 0.52
CPSF3-203ENST00000475482 ZNF467Q7Z7K2 595 aaPredicted RBP18.31■□□□□ 0.52
CPSF3-203ENST00000475482 DCAF4Q8WV16 495 aa18.31■□□□□ 0.52
CPSF3-203ENST00000475482 IL17RAQ96F46 866 aa18.31■□□□□ 0.52
CPSF3-203ENST00000475482 FBXO40Q9UH90 709 aa18.31■□□□□ 0.52
CPSF3-203ENST00000475482 CTNNA3Q9UI47 895 aa18.31■□□□□ 0.52
CPSF3-203ENST00000475482 NEDD4P46934 1319 aa18.3■□□□□ 0.52
CPSF3-203ENST00000475482 DNM1LO00429 736 aa18.3■□□□□ 0.52
CPSF3-203ENST00000475482 ZNF213O14771 459 aa18.3■□□□□ 0.52
CPSF3-203ENST00000475482 PTH1RQ03431 593 aa18.3■□□□□ 0.52
CPSF3-203ENST00000475482 FGD4Q96M96 766 aa18.3■□□□□ 0.52
CPSF3-203ENST00000475482 TOMM22Q9NS69 142 aa18.3■□□□□ 0.52
CPSF3-203ENST00000475482 PRR12Q9ULL5 1215 aa18.3■□□□□ 0.52
CPSF3-203ENST00000475482 RBM8AQ9Y5S9 174 aaKnown RBP18.3■□□□□ 0.52
CPSF3-203ENST00000475482 DNAH12Q6ZR08 3092 aa18.3■□□□□ 0.52
CPSF3-203ENST00000475482 ST18O60284 1047 aa18.29■□□□□ 0.52
CPSF3-203ENST00000475482 ZNF865P0CJ78 1059 aaPredicted RBP18.29■□□□□ 0.52
CPSF3-203ENST00000475482 SNHG28P0DPA3 235 aa18.29■□□□□ 0.52
CPSF3-203ENST00000475482 ESR2Q92731 530 aa18.29■□□□□ 0.52
CPSF3-203ENST00000475482 CTDP1Q9Y5B0 961 aaPredicted RBP18.29■□□□□ 0.52
CPSF3-203ENST00000475482 SYNGAP1Q96PV0 1343 aa18.28■□□□□ 0.52
CPSF3-203ENST00000475482 SNAI1O95863 264 aaPredicted RBP18.28■□□□□ 0.52
CPSF3-203ENST00000475482 PDHBP11177 359 aa18.28■□□□□ 0.52
CPSF3-203ENST00000475482 KRT32Q14532 448 aa18.28■□□□□ 0.52
CPSF3-203ENST00000475482 NECTIN1Q15223 517 aa18.28■□□□□ 0.52
CPSF3-203ENST00000475482 TKFCQ3LXA3 575 aa18.28■□□□□ 0.52
CPSF3-203ENST00000475482 CHRDL2Q6WN34 429 aa18.28■□□□□ 0.52
CPSF3-203ENST00000475482 DGKHQ86XP1 1220 aa18.28■□□□□ 0.52
CPSF3-203ENST00000475482 ARRDC4Q8NCT1 418 aa18.28■□□□□ 0.52
CPSF3-203ENST00000475482 ANKS1AQ92625 1134 aa18.28■□□□□ 0.52
CPSF3-203ENST00000475482 DDX11Q96FC9 970 aa18.28■□□□□ 0.52
CPSF3-203ENST00000475482 AGBL1Q96MI9 1066 aa18.28■□□□□ 0.52
CPSF3-203ENST00000475482 KIF2CQ99661 725 aa18.28■□□□□ 0.52
CPSF3-203ENST00000475482 TAL1P17542 331 aaPredicted RBP18.27■□□□□ 0.52
CPSF3-203ENST00000475482 PSMA5P28066 241 aa18.27■□□□□ 0.52
CPSF3-203ENST00000475482 LRRC26Q2I0M4 334 aa18.27■□□□□ 0.52
CPSF3-203ENST00000475482 TTBK2Q6IQ55 1244 aa18.27■□□□□ 0.52
CPSF3-203ENST00000475482 HSCBQ8IWL3 235 aa18.27■□□□□ 0.52
CPSF3-203ENST00000475482 KCNB2Q92953 911 aa18.27■□□□□ 0.52
CPSF3-203ENST00000475482 SNX21Q969T3 373 aa18.27■□□□□ 0.52
CPSF3-203ENST00000475482 RANBP17Q9H2T7 1088 aaKnown RBP18.27■□□□□ 0.52
CPSF3-203ENST00000475482 ACAD9Q9H845 621 aa18.27■□□□□ 0.52
CPSF3-203ENST00000475482 RBM27Q9P2N5 1060 aaKnown RBP18.27■□□□□ 0.52
CPSF3-203ENST00000475482 LCTP09848 1927 aa18.26■□□□□ 0.51
CPSF3-203ENST00000475482 FXR1P51114 621 aaKnown RBP eCLIP18.26■□□□□ 0.51
CPSF3-203ENST00000475482 IMMTQ16891 758 aaKnown RBP18.26■□□□□ 0.51
CPSF3-203ENST00000475482 ANO1Q5XXA6 986 aa18.26■□□□□ 0.51
CPSF3-203ENST00000475482 CREB3L3Q68CJ9 461 aa18.26■□□□□ 0.51
CPSF3-203ENST00000475482 C7orf61Q8IZ16 206 aa18.26■□□□□ 0.51
CPSF3-203ENST00000475482 ANKRD35Q8N283 1001 aa18.26■□□□□ 0.51
CPSF3-203ENST00000475482 FAM133AQ8N9E0 248 aa18.26■□□□□ 0.51
CPSF3-203ENST00000475482 CHMP4CQ96CF2 233 aa18.26■□□□□ 0.51
CPSF3-203ENST00000475482 A1CFQ9NQ94 594 aaKnown RBP18.26■□□□□ 0.51
CPSF3-203ENST00000475482 RNF146Q9NTX7 359 aa18.26■□□□□ 0.51
CPSF3-203ENST00000475482 ICAM1P05362 532 aa18.25■□□□□ 0.51
CPSF3-203ENST00000475482 SLC4A3P48751 1232 aa18.25■□□□□ 0.51
CPSF3-203ENST00000475482 MCM2P49736 904 aa18.25■□□□□ 0.51
CPSF3-203ENST00000475482 ZNF543Q08ER8 600 aa18.25■□□□□ 0.51
CPSF3-203ENST00000475482 IKQ13123 557 aaPredicted RBP18.25■□□□□ 0.51
CPSF3-203ENST00000475482 LRRC41Q15345 812 aa18.25■□□□□ 0.51
CPSF3-203ENST00000475482 TSGA10IPQ3SY00 556 aa18.25■□□□□ 0.51
CPSF3-203ENST00000475482 CCDC178Q5BJE1 867 aa18.25■□□□□ 0.51
CPSF3-203ENST00000475482 GJC2Q5T442 439 aaPredicted RBP18.25■□□□□ 0.51
CPSF3-203ENST00000475482 GDF15Q99988 308 aa18.25■□□□□ 0.51
CPSF3-203ENST00000475482 TM6SF1Q9BZW5 370 aa18.25■□□□□ 0.51
CPSF3-203ENST00000475482 SENP6Q9GZR1 1112 aaPredicted RBP18.25■□□□□ 0.51
CPSF3-203ENST00000475482 SNX14Q9Y5W7 946 aa18.25■□□□□ 0.51
CPSF3-203ENST00000475482 B4E1Z4 1266 aa18.24■□□□□ 0.51
CPSF3-203ENST00000475482 SLC27A2O14975 620 aa18.24■□□□□ 0.51
CPSF3-203ENST00000475482 KDM4AO75164 1064 aa18.24■□□□□ 0.51
CPSF3-203ENST00000475482 AKR1A1P14550 325 aa18.24■□□□□ 0.51
CPSF3-203ENST00000475482 SLC16A2P36021 539 aa18.24■□□□□ 0.51
CPSF3-203ENST00000475482 SNAP25P60880 206 aa18.24■□□□□ 0.51
CPSF3-203ENST00000475482 CCDC96Q2M329 555 aa18.24■□□□□ 0.51
CPSF3-203ENST00000475482 SYDE2Q5VT97 1194 aa18.24■□□□□ 0.51
CPSF3-203ENST00000475482 TRERF1Q96PN7 1200 aa18.24■□□□□ 0.51
CPSF3-203ENST00000475482 KATNBL1Q9H079 304 aa18.24■□□□□ 0.51
CPSF3-203ENST00000475482 ZSWIM5Q9P217 1185 aa18.24■□□□□ 0.51
CPSF3-203ENST00000475482 ISY1Q9ULR0 285 aaKnown RBP18.24■□□□□ 0.51
CPSF3-203ENST00000475482 MTMR7Q9Y216 660 aa18.24■□□□□ 0.51
CPSF3-203ENST00000475482 CNPY2Q9Y2B0 182 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms