RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 MAGEB6P1A0A0J9YX57 407 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 MOCS3O95396 460 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 CYP2D6P10635 497 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 PWP2Q15269 919 aaKnown RBP15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 MAP9Q49MG5 647 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 TYW1BQ6NUM6 668 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 NFRKBQ6P4R8 1299 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 BCAS4Q8TDM0 211 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 ARL8AQ96BM9 186 aa15.35■□□□□ 0.05
SEMA4D-217ENST00000475255 CHD4Q14839 1912 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 MYH13Q9UKX3 1938 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 USP17L12C9JPN9 530 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 USP17L21D6R901 530 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 KRT86O43790 486 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 GNGT1P63211 74 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 NAALADL2Q58DX5 795 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 PAPD7Q5XG87 772 aaKnown RBP15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 ADSSL1Q8N142 457 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 CSGALNACT2Q8N6G5 542 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 TSEN2Q8NCE0 465 aaKnown RBP15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 PPM1EQ8WY54 764 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 TUBGCP2Q9BSJ2 902 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 LRP6O75581 1613 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 RNASE9P60153 205 aaKnown RBP15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 CCDC178Q5BJE1 867 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 TMTC3Q6ZXV5 915 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 CTCFLQ8NI51 663 aaPredicted RBP15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 ZNF507Q8TCN5 953 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 DNAJC7Q99615 494 aa15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 MAGEC2Q9UBF1 373 aaPredicted RBP15.34■□□□□ 0.05
SEMA4D-217ENST00000475255 ESYT3A0FGR9 886 aa15.33■□□□□ 0.05
SEMA4D-217ENST00000475255 IPO7O95373 1038 aaKnown RBP15.33■□□□□ 0.05
SEMA4D-217ENST00000475255 TRIM14Q14142 442 aa15.33■□□□□ 0.05
SEMA4D-217ENST00000475255 TADA2BQ86TJ2 420 aa15.33■□□□□ 0.05
SEMA4D-217ENST00000475255 DZIP3Q86Y13 1208 aaKnown RBP15.33■□□□□ 0.05
SEMA4D-217ENST00000475255 FAM207AQ9NSI2 230 aaPredicted RBP15.33■□□□□ 0.05
SEMA4D-217ENST00000475255 CAPN11Q9UMQ6 739 aa15.33■□□□□ 0.05
SEMA4D-217ENST00000475255 RTL9Q8NET4 1388 aa15.33■□□□□ 0.04
SEMA4D-217ENST00000475255 CNTNAP5Q8WYK1 1306 aa15.33■□□□□ 0.04
SEMA4D-217ENST00000475255 H7C1D1 291 aa15.33■□□□□ 0.04
SEMA4D-217ENST00000475255 EPHB6O15197 1021 aa15.33■□□□□ 0.04
SEMA4D-217ENST00000475255 FCER1AP12319 257 aa15.33■□□□□ 0.04
SEMA4D-217ENST00000475255 MTIF2P46199 727 aaKnown RBP15.33■□□□□ 0.04
SEMA4D-217ENST00000475255 EVA1CP58658 441 aa15.33■□□□□ 0.04
SEMA4D-217ENST00000475255 PDCLQ13371 301 aa15.33■□□□□ 0.04
SEMA4D-217ENST00000475255 SUSD4Q5VX71 490 aa15.33■□□□□ 0.04
SEMA4D-217ENST00000475255 CPVLQ9H3G5 476 aa15.33■□□□□ 0.04
SEMA4D-217ENST00000475255 ZSCAN5CA6NGD5 496 aaPredicted RBP15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 TMC4Q7Z404 712 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 IQCA1Q86XH1 822 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 MSL3Q8N5Y2 521 aaKnown RBP15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 MS4A14Q96JA4 679 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 DEF6Q9H4E7 631 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 VIPAS39Q9H9C1 493 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 FAM169AQ9Y6X4 670 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 ZEB2O60315 1214 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 GNAT2P19087 354 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 CT47A1Q5JQC4 288 aaPredicted RBP15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 MROH5Q6ZUA9 1318 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 SCG2P13521 617 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 TUBB4BP68371 445 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 KRT83P78385 493 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 KIF5AQ12840 1032 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 INF2Q27J81 1249 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 C2CD5Q86YS7 1000 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 ANKRD18AQ8IVF6 992 aa15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 ZNHIT6Q9NWK9 470 aaKnown RBP15.32■□□□□ 0.04
SEMA4D-217ENST00000475255 COL18A1P39060 1754 aa15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 NID2Q14112 1375 aa15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 BAZ2AQ9UIF9 1905 aaKnown RBP15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 PNPLA7Q6ZV29 1317 aa15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 CYLC1P35663 651 aaPredicted RBP15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 CKAP4Q07065 602 aaKnown RBP15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 ANKRD40Q6AI12 368 aa15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 CREG2Q8IUH2 290 aa15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 SECISBP2LQ93073 1101 aaKnown RBP15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 DUSP9Q99956 384 aaKnown RBP15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 CAPS2Q9BXY5 557 aa15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 DISC1Q9NRI5 854 aa15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 BUB1O43683 1085 aa15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 TUBBP07437 444 aa15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 STK4Q13043 487 aa15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 STAG2Q8N3U4 1231 aa15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 CNOT6LQ96LI5 555 aaKnown RBP15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 CCDC42Q96M95 316 aa15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 EXOC1Q9NV70 894 aa15.31■□□□□ 0.04
SEMA4D-217ENST00000475255 PSMA7O14818 248 aa15.3■□□□□ 0.04
SEMA4D-217ENST00000475255 KRT14P02533 472 aa15.3■□□□□ 0.04
SEMA4D-217ENST00000475255 UBA7P41226 1012 aa15.3■□□□□ 0.04
SEMA4D-217ENST00000475255 ENOX2Q16206 610 aaKnown RBP15.3■□□□□ 0.04
SEMA4D-217ENST00000475255 RMND1Q9NWS8 449 aa15.3■□□□□ 0.04
SEMA4D-217ENST00000475255 PDS5AQ29RF7 1337 aaKnown RBP15.3■□□□□ 0.04
SEMA4D-217ENST00000475255 EBAG9O00559 213 aa15.3■□□□□ 0.04
SEMA4D-217ENST00000475255 KLRC4O43908 158 aa15.3■□□□□ 0.04
SEMA4D-217ENST00000475255 ERLIN2O94905 339 aa15.3■□□□□ 0.04
SEMA4D-217ENST00000475255 BMP15O95972 392 aa15.3■□□□□ 0.04
SEMA4D-217ENST00000475255 MNAT1P51948 309 aa15.3■□□□□ 0.04
SEMA4D-217ENST00000475255 NAP1L1P55209 391 aaKnown RBP15.3■□□□□ 0.04
SEMA4D-217ENST00000475255 CHRNDQ07001 517 aa15.3■□□□□ 0.04
SEMA4D-217ENST00000475255 PTPROQ16827 1216 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms