RNA–Protein interactions for RNA: ENST00000474880.5

ARPC1B-216, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-216ENST00000474880 KCTD1Q719H9 257 aa13□□□□□ -0.33
ARPC1B-216ENST00000474880 CPXCR1Q8N123 301 aa13□□□□□ -0.33
ARPC1B-216ENST00000474880 KAT14Q9H8E8 782 aa13□□□□□ -0.33
ARPC1B-216ENST00000474880 SLC38A10Q9HBR0 1119 aa13□□□□□ -0.33
ARPC1B-216ENST00000474880 SLC5A4Q9NY91 659 aa13□□□□□ -0.33
ARPC1B-216ENST00000474880 ZSWIM5Q9P217 1185 aa13□□□□□ -0.33
ARPC1B-216ENST00000474880 DDX20Q9UHI6 824 aaKnown RBP13□□□□□ -0.33
ARPC1B-216ENST00000474880 DNAH12Q6ZR08 3092 aa13□□□□□ -0.33
ARPC1B-216ENST00000474880 TNKSO95271 1327 aa12.99□□□□□ -0.33
ARPC1B-216ENST00000474880 ATP2A1O14983 1001 aa12.99□□□□□ -0.33
ARPC1B-216ENST00000474880 SLC4A3P48751 1232 aa12.99□□□□□ -0.33
ARPC1B-216ENST00000474880 OAZ1P54368 228 aa12.99□□□□□ -0.33
ARPC1B-216ENST00000474880 KCTD2Q14681 263 aa12.99□□□□□ -0.33
ARPC1B-216ENST00000474880 ZNF792Q3KQV3 632 aa12.99□□□□□ -0.33
ARPC1B-216ENST00000474880 CHRDL2Q6WN34 429 aa12.99□□□□□ -0.33
ARPC1B-216ENST00000474880 RASGRP2Q7LDG7 609 aa12.99□□□□□ -0.33
ARPC1B-216ENST00000474880 NCOA7Q8NI08 942 aa12.99□□□□□ -0.33
ARPC1B-216ENST00000474880 LSG1Q9H089 658 aaKnown RBP12.99□□□□□ -0.33
ARPC1B-216ENST00000474880 RAVER2Q9HCJ3 691 aaKnown RBP12.99□□□□□ -0.33
ARPC1B-216ENST00000474880 LCTP09848 1927 aa12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 ERICH2A1L162 156 aa12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 E7EWF7 191 aa12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 MSCO60682 206 aa12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 PDHBP11177 359 aa12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 SART3Q15020 963 aaKnown RBP12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 IFIT1BQ5T764 474 aaKnown RBP12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 RNF20Q5VTR2 975 aa12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 ANO1Q5XXA6 986 aa12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 C7orf61Q8IZ16 206 aa12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 ENAHQ8N8S7 591 aaPredicted RBP12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 PNMA1Q8ND90 353 aa12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 ANKS1AQ92625 1134 aa12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 DIS3Q9Y2L1 958 aaKnown RBP12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 MYH6P13533 1939 aa12.98□□□□□ -0.33
ARPC1B-216ENST00000474880 FRMPD2Q68DX3 1309 aaPredicted RBP12.97□□□□□ -0.33
ARPC1B-216ENST00000474880 DNAJC25-GNG10A0A024R161 153 aa12.97□□□□□ -0.33
ARPC1B-216ENST00000474880 SEPT4O43236 478 aa12.97□□□□□ -0.33
ARPC1B-216ENST00000474880 ZNF543Q08ER8 600 aa12.97□□□□□ -0.33
ARPC1B-216ENST00000474880 GPATCH4Q5T3I0 446 aaKnown RBP12.97□□□□□ -0.33
ARPC1B-216ENST00000474880 TINF2Q9BSI4 451 aa12.97□□□□□ -0.33
ARPC1B-216ENST00000474880 PRO3102Q9H379 93 aa12.97□□□□□ -0.33
ARPC1B-216ENST00000474880 GPCPD1Q9NPB8 672 aa12.97□□□□□ -0.33
ARPC1B-216ENST00000474880 RBM27Q9P2N5 1060 aaKnown RBP12.97□□□□□ -0.33
ARPC1B-216ENST00000474880 FBXO40Q9UH90 709 aa12.97□□□□□ -0.33
ARPC1B-216ENST00000474880 PRR12Q9ULL5 1215 aa12.97□□□□□ -0.33
ARPC1B-216ENST00000474880 ZNF536O15090 1300 aa12.96□□□□□ -0.33
ARPC1B-216ENST00000474880 IFIT3O14879 490 aaKnown RBP12.96□□□□□ -0.33
ARPC1B-216ENST00000474880 SLC27A2O14975 620 aa12.96□□□□□ -0.33
ARPC1B-216ENST00000474880 SNHG28P0DPA3 235 aa12.96□□□□□ -0.33
ARPC1B-216ENST00000474880 TAL1P17542 331 aaPredicted RBP12.96□□□□□ -0.33
ARPC1B-216ENST00000474880 LRRC26Q2I0M4 334 aa12.96□□□□□ -0.33
ARPC1B-216ENST00000474880 SYDE2Q5VT97 1194 aa12.96□□□□□ -0.33
ARPC1B-216ENST00000474880 BTNL9Q6UXG8 535 aa12.96□□□□□ -0.33
ARPC1B-216ENST00000474880 CYB5R4Q7L1T6 521 aa12.96□□□□□ -0.33
ARPC1B-216ENST00000474880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.96□□□□□ -0.33
ARPC1B-216ENST00000474880 CHST13Q8NET6 341 aa12.96□□□□□ -0.33
ARPC1B-216ENST00000474880 DDX11Q96FC9 970 aa12.96□□□□□ -0.33
ARPC1B-216ENST00000474880 ZMYND8Q9ULU4 1186 aaPredicted RBP12.96□□□□□ -0.33
ARPC1B-216ENST00000474880 SLC16A2P36021 539 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 FXR1P51114 621 aaKnown RBP eCLIP12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 SNAP25P60880 206 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 WTAPQ15007 396 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 TKFCQ3LXA3 575 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 ASPRV1Q53RT3 343 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 GJC2Q5T442 439 aaPredicted RBP12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 CREB3L3Q68CJ9 461 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 TTBK2Q6IQ55 1244 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 CCDC174Q6PII3 467 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 STOX1Q6ZVD7 989 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 AGBL1Q96MI9 1066 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 SENP6Q9GZR1 1112 aaPredicted RBP12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 ACAD9Q9H845 621 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 HOMER2Q9NSB8 354 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 PCDH10Q9P2E7 1040 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 NRBP1Q9UHY1 535 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 PNMA2Q9UL42 364 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 TAF6LQ9Y6J9 622 aa12.95□□□□□ -0.34
ARPC1B-216ENST00000474880 DNM1LO00429 736 aa12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 SNAI1O95863 264 aaPredicted RBP12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 PARP1P09874 1014 aaKnown RBP12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 ZNF865P0CJ78 1059 aaPredicted RBP12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 ALAS1P13196 640 aa12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 SYN1P17600 705 aa12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 NECTIN1Q15223 517 aa12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 SEC23AQ15436 765 aa12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 TMEM67Q5HYA8 995 aa12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 MAMDC4Q6UXC1 1216 aa12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 MB21D2Q8IYB1 491 aaPredicted RBP12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 ANKRD35Q8N283 1001 aa12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 ARRDC4Q8NCT1 418 aa12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 FGD4Q96M96 766 aa12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 MTA3Q9BTC8 594 aa12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 RANBP17Q9H2T7 1088 aaKnown RBP12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 RNF146Q9NTX7 359 aa12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 CCPG1Q9ULG6 757 aa12.94□□□□□ -0.34
ARPC1B-216ENST00000474880 DHX16O60231 1041 aaKnown RBP12.93□□□□□ -0.34
ARPC1B-216ENST00000474880 REC8O95072 547 aa12.93□□□□□ -0.34
ARPC1B-216ENST00000474880 ICAM1P05362 532 aa12.93□□□□□ -0.34
ARPC1B-216ENST00000474880 GOLGA8HP0CJ92 632 aa12.93□□□□□ -0.34
ARPC1B-216ENST00000474880 MCM5P33992 734 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms