RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 C1QTNF1Q9BXJ1 281 aa14.93□□□□□ -0.02
TRIM13-207ENST00000474805 MTIF3Q9H2K0 278 aaKnown RBP14.93□□□□□ -0.02
TRIM13-207ENST00000474805 GREB1LQ9C091 1923 aaPredicted RBP14.93□□□□□ -0.02
TRIM13-207ENST00000474805 PRRC2BQ5JSZ5 2229 aaKnown RBP14.93□□□□□ -0.02
TRIM13-207ENST00000474805 CHD7Q9P2D1 2997 aa14.93□□□□□ -0.02
TRIM13-207ENST00000474805 CHGBP05060 677 aa14.92□□□□□ -0.02
TRIM13-207ENST00000474805 RLBP1P12271 317 aa14.92□□□□□ -0.02
TRIM13-207ENST00000474805 HOXD11P31277 338 aaPredicted RBP14.92□□□□□ -0.02
TRIM13-207ENST00000474805 ADD2P35612 726 aa14.92□□□□□ -0.02
TRIM13-207ENST00000474805 KCNQ1P51787 676 aa14.92□□□□□ -0.02
TRIM13-207ENST00000474805 CCL23P55773 120 aa14.92□□□□□ -0.02
TRIM13-207ENST00000474805 CXCL17Q6UXB2 119 aa14.92□□□□□ -0.02
TRIM13-207ENST00000474805 ARMCX2Q7L311 632 aa14.92□□□□□ -0.02
TRIM13-207ENST00000474805 AMOTL1Q8IY63 956 aa14.92□□□□□ -0.02
TRIM13-207ENST00000474805 FTSJ3Q8IY81 847 aaKnown RBP14.92□□□□□ -0.02
TRIM13-207ENST00000474805 ANKRD35Q8N283 1001 aa14.92□□□□□ -0.02
TRIM13-207ENST00000474805 PRPF38AQ8NAV1 312 aaKnown RBP14.92□□□□□ -0.02
TRIM13-207ENST00000474805 RHPN1Q8TCX5 695 aa14.92□□□□□ -0.02
TRIM13-207ENST00000474805 HIPK3Q9H422 1215 aa14.92□□□□□ -0.02
TRIM13-207ENST00000474805 RAVER2Q9HCJ3 691 aaKnown RBP14.92□□□□□ -0.02
TRIM13-207ENST00000474805 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.91□□□□□ -0.02
TRIM13-207ENST00000474805 F5H6K3 240 aa14.91□□□□□ -0.02
TRIM13-207ENST00000474805 KLRC3Q07444 240 aa14.91□□□□□ -0.02
TRIM13-207ENST00000474805 SKIV2LQ15477 1246 aaKnown RBP14.91□□□□□ -0.02
TRIM13-207ENST00000474805 PPP2R2DQ66LE6 453 aa14.91□□□□□ -0.02
TRIM13-207ENST00000474805 CTR9Q6PD62 1173 aa14.91□□□□□ -0.02
TRIM13-207ENST00000474805 CCDC144CPQ8IYA2 1237 aa14.91□□□□□ -0.02
TRIM13-207ENST00000474805 STK11IPQ8N1F8 1099 aa14.91□□□□□ -0.02
TRIM13-207ENST00000474805 SLC43A3Q8NBI5 491 aa14.91□□□□□ -0.02
TRIM13-207ENST00000474805 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.91□□□□□ -0.02
TRIM13-207ENST00000474805 CTDP1Q9Y5B0 961 aaPredicted RBP14.91□□□□□ -0.02
TRIM13-207ENST00000474805 RFXAPO00287 272 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 ATP2A1O14983 1001 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 ZBED4O75132 1171 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 NDUFB10O96000 172 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 TNFAIP2Q03169 654 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 NOL8Q76FK4 1167 aaKnown RBP14.9□□□□□ -0.02
TRIM13-207ENST00000474805 KIFC2Q96AC6 838 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 DDRGK1Q96HY6 314 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 KATNBL1Q9H079 304 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 TRPV6Q9H1D0 765 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 BOLA2Q9H3K6 86 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 EPHX3Q9H6B9 360 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 PAG1Q9NWQ8 432 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 SLC4A7Q9Y6M7 1214 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 SLC4A4Q9Y6R1 1079 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 SCN5AQ14524 2016 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 ASTN1O14525 1302 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 GRIN2DO15399 1336 aa14.9□□□□□ -0.02
TRIM13-207ENST00000474805 IFIT2P09913 472 aaKnown RBP14.89□□□□□ -0.03
TRIM13-207ENST00000474805 PTGS1P23219 599 aa14.89□□□□□ -0.03
TRIM13-207ENST00000474805 NKX3-2P78367 333 aa14.89□□□□□ -0.03
TRIM13-207ENST00000474805 CNTN2Q02246 1040 aa14.89□□□□□ -0.03
TRIM13-207ENST00000474805 ITGA7Q13683 1181 aa14.89□□□□□ -0.03
TRIM13-207ENST00000474805 AAK1Q2M2I8 961 aa14.89□□□□□ -0.03
TRIM13-207ENST00000474805 CLASRPQ8N2M8 674 aaKnown RBP14.89□□□□□ -0.03
TRIM13-207ENST00000474805 LRFN3Q9BTN0 628 aa14.89□□□□□ -0.03
TRIM13-207ENST00000474805 NOC4LQ9BVI4 516 aaKnown RBP14.89□□□□□ -0.03
TRIM13-207ENST00000474805 WNT8AQ9H1J5 351 aa14.89□□□□□ -0.03
TRIM13-207ENST00000474805 PCDHA11Q9Y5I1 949 aa14.89□□□□□ -0.03
TRIM13-207ENST00000474805 XIRP2A4UGR9 3374 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 ZBBXA8MT70 800 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 ERC2O15083 957 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 B4GALT4O60513 344 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 HSP90AB4PQ58FF6 505 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.88□□□□□ -0.03
TRIM13-207ENST00000474805 RPUSD2Q8IZ73 545 aaKnown RBP14.88□□□□□ -0.03
TRIM13-207ENST00000474805 CHST13Q8NET6 341 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 VWCEQ96DN2 955 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 SCLYQ96I15 445 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 CERS4Q9HA82 394 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 SLC38A10Q9HBR0 1119 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 HOMER2Q9NSB8 354 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 NYAP2Q9P242 653 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 CLIP2Q9UDT6 1046 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 TRANK1O15050 2925 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 ZBED9Q6R2W3 1325 aa14.88□□□□□ -0.03
TRIM13-207ENST00000474805 ATP2A2P16615 1042 aaKnown RBP14.87□□□□□ -0.03
TRIM13-207ENST00000474805 RASA1P20936 1047 aa14.87□□□□□ -0.03
TRIM13-207ENST00000474805 PSMC6P62333 389 aa14.87□□□□□ -0.03
TRIM13-207ENST00000474805 TLK2Q86UE8 772 aa14.87□□□□□ -0.03
TRIM13-207ENST00000474805 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRIM13-207ENST00000474805 FBXO40Q9UH90 709 aa14.87□□□□□ -0.03
TRIM13-207ENST00000474805 GNEQ9Y223 722 aaKnown RBP14.87□□□□□ -0.03
TRIM13-207ENST00000474805 MTCH2Q9Y6C9 303 aa14.87□□□□□ -0.03
TRIM13-207ENST00000474805 LRRC37A2A6NM11 1700 aa14.86□□□□□ -0.03
TRIM13-207ENST00000474805 SOWAHBA6NEL2 793 aa14.86□□□□□ -0.03
TRIM13-207ENST00000474805 DYNC1LI2O43237 492 aaPredicted RBP14.86□□□□□ -0.03
TRIM13-207ENST00000474805 CABYRO75952 493 aa14.86□□□□□ -0.03
TRIM13-207ENST00000474805 FSCN1Q16658 493 aaKnown RBP14.86□□□□□ -0.03
TRIM13-207ENST00000474805 TMEM63BQ5T3F8 832 aa14.86□□□□□ -0.03
TRIM13-207ENST00000474805 KRT40Q6A162 431 aa14.86□□□□□ -0.03
TRIM13-207ENST00000474805 FAM133AQ8N9E0 248 aa14.86□□□□□ -0.03
TRIM13-207ENST00000474805 KIF1BPQ96EK5 621 aa14.86□□□□□ -0.03
TRIM13-207ENST00000474805 AGBL1Q96MI9 1066 aa14.86□□□□□ -0.03
TRIM13-207ENST00000474805 PUS7LQ9H0K6 701 aaKnown RBP14.86□□□□□ -0.03
TRIM13-207ENST00000474805 AP5M1Q9H0R1 490 aa14.86□□□□□ -0.03
TRIM13-207ENST00000474805 MKNK2Q9HBH9 465 aa14.86□□□□□ -0.03
TRIM13-207ENST00000474805 HCN4Q9Y3Q4 1203 aa14.86□□□□□ -0.03
TRIM13-207ENST00000474805 DDX49Q9Y6V7 483 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms