RNA–Protein interactions for RNA: ENST00000474734.5

CACFD1-204, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 689 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-204ENST00000474734 SLKQ9H2G2 1235 aaPredicted RBP21.53■■□□□ 1.04
CACFD1-204ENST00000474734 ISY1Q9ULR0 285 aaKnown RBP21.53■■□□□ 1.04
CACFD1-204ENST00000474734 RTN1Q16799 776 aa21.52■■□□□ 1.04
CACFD1-204ENST00000474734 KIAA1755Q5JYT7 1200 aa21.52■■□□□ 1.04
CACFD1-204ENST00000474734 PAWRQ96IZ0 340 aaKnown RBP21.52■■□□□ 1.04
CACFD1-204ENST00000474734 LZTS2Q9BRK4 669 aa21.52■■□□□ 1.04
CACFD1-204ENST00000474734 TXNRD2Q9NNW7 524 aa21.52■■□□□ 1.04
CACFD1-204ENST00000474734 GJD2Q9UKL4 321 aa21.52■■□□□ 1.04
CACFD1-204ENST00000474734 SZT2Q5T011 3432 aa21.52■■□□□ 1.04
CACFD1-204ENST00000474734 USP17L15C9J2P7 530 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 USP17L13C9JLJ4 530 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 USP17L11C9JVI0 530 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 USP17L18D6R9N7 530 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 USP17L22D6RA61 530 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 USP17L17D6RBQ6 530 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 USP17L19D6RCP7 530 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 USP17L20D6RJB6 530 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 DHX16O60231 1041 aaKnown RBP21.51■■□□□ 1.03
CACFD1-204ENST00000474734 PLA2G6O60733 806 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 PFKFB2O60825 505 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 HOXA7P31268 230 aaPredicted RBP21.51■■□□□ 1.03
CACFD1-204ENST00000474734 USP17L24Q0WX57 530 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 FAM83BQ5T0W9 1011 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 NECAB2Q7Z6G3 386 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 HSCBQ8IWL3 235 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 LARP6Q9BRS8 491 aaKnown RBP21.51■■□□□ 1.03
CACFD1-204ENST00000474734 TANGO6Q9C0B7 1094 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 PRO3102Q9H379 93 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 RPAP3Q9H6T3 665 aaPredicted RBP21.51■■□□□ 1.03
CACFD1-204ENST00000474734 MORF4L1Q9UBU8 362 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 FEM1BQ9UK73 627 aa21.51■■□□□ 1.03
CACFD1-204ENST00000474734 PALM3A6NDB9 673 aaPredicted RBP21.5■■□□□ 1.03
CACFD1-204ENST00000474734 RXRAP19793 462 aa21.5■■□□□ 1.03
CACFD1-204ENST00000474734 STAT2P52630 851 aa21.5■■□□□ 1.03
CACFD1-204ENST00000474734 CPLX2Q6PUV4 134 aaKnown RBP21.5■■□□□ 1.03
CACFD1-204ENST00000474734 KCTD1Q719H9 257 aa21.5■■□□□ 1.03
CACFD1-204ENST00000474734 FAM160B2Q86V87 743 aa21.5■■□□□ 1.03
CACFD1-204ENST00000474734 CHURC1Q8WUH1 139 aa21.5■■□□□ 1.03
CACFD1-204ENST00000474734 HMX1Q9NP08 348 aaPredicted RBP21.5■■□□□ 1.03
CACFD1-204ENST00000474734 MAD2L2Q9UI95 211 aa21.5■■□□□ 1.03
CACFD1-204ENST00000474734 CD2BP2O95400 341 aaKnown RBP21.49■■□□□ 1.03
CACFD1-204ENST00000474734 TRIM32Q13049 653 aa21.49■■□□□ 1.03
CACFD1-204ENST00000474734 ME3Q16798 604 aa21.49■■□□□ 1.03
CACFD1-204ENST00000474734 RAB11FIP4Q86YS3 637 aa21.49■■□□□ 1.03
CACFD1-204ENST00000474734 CCDC144CPQ8IYA2 1237 aa21.49■■□□□ 1.03
CACFD1-204ENST00000474734 DIS3LQ8TF46 1054 aaKnown RBP21.49■■□□□ 1.03
CACFD1-204ENST00000474734 NUP88Q99567 741 aaPredicted RBP21.49■■□□□ 1.03
CACFD1-204ENST00000474734 FRMPD2Q68DX3 1309 aaPredicted RBP21.49■■□□□ 1.03
CACFD1-204ENST00000474734 RPTORQ8N122 1335 aa21.49■■□□□ 1.03
CACFD1-204ENST00000474734 TMEM232C9JQI7 657 aa21.48■■□□□ 1.03
CACFD1-204ENST00000474734 CPLX1O14810 134 aa21.48■■□□□ 1.03
CACFD1-204ENST00000474734 CYP2B6P20813 491 aa21.48■■□□□ 1.03
CACFD1-204ENST00000474734 SMARCA1P28370 1054 aa21.48■■□□□ 1.03
CACFD1-204ENST00000474734 HERVK_113P62684 666 aa21.48■■□□□ 1.03
CACFD1-204ENST00000474734 IKQ13123 557 aaPredicted RBP21.48■■□□□ 1.03
CACFD1-204ENST00000474734 STK3Q13188 491 aa21.48■■□□□ 1.03
CACFD1-204ENST00000474734 BTNL9Q6UXG8 535 aa21.48■■□□□ 1.03
CACFD1-204ENST00000474734 CATSPERGQ6ZRH7 1159 aa21.48■■□□□ 1.03
CACFD1-204ENST00000474734 RASGRP2Q7LDG7 609 aa21.48■■□□□ 1.03
CACFD1-204ENST00000474734 GPRC5AQ8NFJ5 357 aa21.48■■□□□ 1.03
CACFD1-204ENST00000474734 GTF3C6Q969F1 213 aa21.48■■□□□ 1.03
CACFD1-204ENST00000474734 GPCPD1Q9NPB8 672 aa21.48■■□□□ 1.03
CACFD1-204ENST00000474734 RBPJLQ9UBG7 517 aa21.48■■□□□ 1.03
CACFD1-204ENST00000474734 KLRF2D3W0D1 207 aa21.47■■□□□ 1.03
CACFD1-204ENST00000474734 K7ELQ4 463 aaPredicted RBP21.47■■□□□ 1.03
CACFD1-204ENST00000474734 FLOT1O75955 427 aa21.47■■□□□ 1.03
CACFD1-204ENST00000474734 CDKL5O76039 1030 aa21.47■■□□□ 1.03
CACFD1-204ENST00000474734 CCT2P78371 535 aaKnown RBP21.47■■□□□ 1.03
CACFD1-204ENST00000474734 Q3C1V9 767 aa21.47■■□□□ 1.03
CACFD1-204ENST00000474734 TMTC3Q6ZXV5 915 aa21.47■■□□□ 1.03
CACFD1-204ENST00000474734 ANKLE1Q8NAG6 615 aa21.47■■□□□ 1.03
CACFD1-204ENST00000474734 TMX3Q96JJ7 454 aa21.47■■□□□ 1.03
CACFD1-204ENST00000474734 SLF1Q9BQI6 1058 aa21.47■■□□□ 1.03
CACFD1-204ENST00000474734 GOLGA8HP0CJ92 632 aa21.46■■□□□ 1.03
CACFD1-204ENST00000474734 FDX1P10109 184 aa21.46■■□□□ 1.03
CACFD1-204ENST00000474734 ANP32AP39687 249 aaKnown RBP21.46■■□□□ 1.03
CACFD1-204ENST00000474734 SCRN1Q12765 414 aa21.46■■□□□ 1.03
CACFD1-204ENST00000474734 BECN1Q14457 450 aa21.46■■□□□ 1.03
CACFD1-204ENST00000474734 COG2Q14746 738 aa21.46■■□□□ 1.03
CACFD1-204ENST00000474734 CCAR1Q8IX12 1150 aaKnown RBP21.46■■□□□ 1.03
CACFD1-204ENST00000474734 STAG2Q8N3U4 1231 aa21.46■■□□□ 1.03
CACFD1-204ENST00000474734 PRPF38AQ8NAV1 312 aaKnown RBP21.46■■□□□ 1.03
CACFD1-204ENST00000474734 TRIB2Q92519 343 aa21.46■■□□□ 1.03
CACFD1-204ENST00000474734 NUDT12Q9BQG2 462 aa21.46■■□□□ 1.03
CACFD1-204ENST00000474734 SPZ1Q9BXG8 430 aa21.46■■□□□ 1.03
CACFD1-204ENST00000474734 HOXC10Q9NYD6 342 aa21.46■■□□□ 1.03
CACFD1-204ENST00000474734 LARGE1O95461 756 aa21.45■■□□□ 1.02
CACFD1-204ENST00000474734 CDC27P30260 824 aa21.45■■□□□ 1.02
CACFD1-204ENST00000474734 SYDE2Q5VT97 1194 aa21.45■■□□□ 1.02
CACFD1-204ENST00000474734 GTF3C2Q8WUA4 911 aaPredicted RBP21.45■■□□□ 1.02
CACFD1-204ENST00000474734 NCOA5Q9HCD5 579 aaKnown RBP21.45■■□□□ 1.02
CACFD1-204ENST00000474734 TSHZ2Q9NRE2 1034 aa21.45■■□□□ 1.02
CACFD1-204ENST00000474734 FAM217BQ9NTX9 383 aaPredicted RBP21.45■■□□□ 1.02
CACFD1-204ENST00000474734 PPP1R9AQ9ULJ8 1098 aa21.45■■□□□ 1.02
CACFD1-204ENST00000474734 A0A1W2PPC1 479 aa21.44■■□□□ 1.02
CACFD1-204ENST00000474734 MAPK4P31152 587 aa21.44■■□□□ 1.02
CACFD1-204ENST00000474734 ADD1P35611 737 aaKnown RBP21.44■■□□□ 1.02
CACFD1-204ENST00000474734 TTBK2Q6IQ55 1244 aa21.44■■□□□ 1.02
CACFD1-204ENST00000474734 C7orf61Q8IZ16 206 aa21.44■■□□□ 1.02
CACFD1-204ENST00000474734 SOCS4Q8WXH5 440 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms