RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 RCOR1Q9UKL0 485 aa23.27■■□□□ 1.32
EDEM3-206ENST00000474725 M0R2N6 131 aa23.27■■□□□ 1.32
EDEM3-206ENST00000474725 VCAM1P19320 739 aa23.27■■□□□ 1.32
EDEM3-206ENST00000474725 TOB1P50616 345 aaPredicted RBP23.27■■□□□ 1.32
EDEM3-206ENST00000474725 ANKRD13AQ8IZ07 590 aa23.27■■□□□ 1.32
EDEM3-206ENST00000474725 RASGRP4Q8TDF6 673 aa23.27■■□□□ 1.32
EDEM3-206ENST00000474725 CNKSR2Q8WXI2 1034 aa23.27■■□□□ 1.32
EDEM3-206ENST00000474725 CLMNQ96JQ2 1002 aa23.27■■□□□ 1.32
EDEM3-206ENST00000474725 ELP3Q9H9T3 547 aa23.27■■□□□ 1.32
EDEM3-206ENST00000474725 ELP1O95163 1332 aa23.26■■□□□ 1.31
EDEM3-206ENST00000474725 ESYT2A0FGR8 921 aa23.26■■□□□ 1.31
EDEM3-206ENST00000474725 C19orf81C9J6K1 198 aa23.26■■□□□ 1.31
EDEM3-206ENST00000474725 HMGCS2P54868 508 aa23.26■■□□□ 1.31
EDEM3-206ENST00000474725 TPRNQ4KMQ1 711 aa23.26■■□□□ 1.31
EDEM3-206ENST00000474725 ANO1Q5XXA6 986 aa23.26■■□□□ 1.31
EDEM3-206ENST00000474725 SAMD1Q6SPF0 538 aaPredicted RBP23.26■■□□□ 1.31
EDEM3-206ENST00000474725 ARMC9Q7Z3E5 817 aa23.26■■□□□ 1.31
EDEM3-206ENST00000474725 PCDHA6Q9UN73 950 aa23.26■■□□□ 1.31
EDEM3-206ENST00000474725 PCDHA8Q9Y5H6 950 aa23.26■■□□□ 1.31
EDEM3-206ENST00000474725 GNA11P29992 359 aa23.25■■□□□ 1.31
EDEM3-206ENST00000474725 PPP1R18Q6NYC8 613 aa23.25■■□□□ 1.31
EDEM3-206ENST00000474725 RPAP3Q9H6T3 665 aaPredicted RBP23.25■■□□□ 1.31
EDEM3-206ENST00000474725 ZNF408Q9H9D4 720 aa23.25■■□□□ 1.31
EDEM3-206ENST00000474725 POLR3EQ9NVU0 708 aa23.25■■□□□ 1.31
EDEM3-206ENST00000474725 DDX49Q9Y6V7 483 aaKnown RBP23.25■■□□□ 1.31
EDEM3-206ENST00000474725 NASPP49321 788 aaPredicted RBP23.25■■□□□ 1.31
EDEM3-206ENST00000474725 SKOR2Q2VWA4 1001 aaPredicted RBP23.25■■□□□ 1.31
EDEM3-206ENST00000474725 RILPL1Q5EBL4 403 aa23.25■■□□□ 1.31
EDEM3-206ENST00000474725 PIK3AP1Q6ZUJ8 805 aa23.25■■□□□ 1.31
EDEM3-206ENST00000474725 FBXO11Q86XK2 927 aa23.25■■□□□ 1.31
EDEM3-206ENST00000474725 C12orf42Q96LP6 360 aa23.25■■□□□ 1.31
EDEM3-206ENST00000474725 AMNQ9BXJ7 453 aa23.25■■□□□ 1.31
EDEM3-206ENST00000474725 RANBP17Q9H2T7 1088 aaKnown RBP23.25■■□□□ 1.31
EDEM3-206ENST00000474725 PCDHA1Q9Y5I3 950 aa23.25■■□□□ 1.31
EDEM3-206ENST00000474725 SF3A1Q15459 793 aaKnown RBP23.24■■□□□ 1.31
EDEM3-206ENST00000474725 LINC00301Q8NCQ3 95 aa23.24■■□□□ 1.31
EDEM3-206ENST00000474725 GPT2Q8TD30 523 aa23.24■■□□□ 1.31
EDEM3-206ENST00000474725 TANGO6Q9C0B7 1094 aa23.24■■□□□ 1.31
EDEM3-206ENST00000474725 ATP2B1P20020 1258 aa23.23■■□□□ 1.31
EDEM3-206ENST00000474725 ADCY7P51828 1080 aa23.23■■□□□ 1.31
EDEM3-206ENST00000474725 SLF1Q9BQI6 1058 aa23.23■■□□□ 1.31
EDEM3-206ENST00000474725 YEATS4O95619 227 aa23.23■■□□□ 1.31
EDEM3-206ENST00000474725 UBE2HP62256 183 aa23.23■■□□□ 1.31
EDEM3-206ENST00000474725 STK38Q15208 465 aa23.23■■□□□ 1.31
EDEM3-206ENST00000474725 USH1GQ495M9 461 aa23.23■■□□□ 1.31
EDEM3-206ENST00000474725 CCDC174Q6PII3 467 aa23.23■■□□□ 1.31
EDEM3-206ENST00000474725 TMOD4Q9NZQ9 345 aa23.23■■□□□ 1.31
EDEM3-206ENST00000474725 TAL1P17542 331 aaPredicted RBP23.22■■□□□ 1.31
EDEM3-206ENST00000474725 SH3D19Q5HYK7 790 aa23.22■■□□□ 1.31
EDEM3-206ENST00000474725 ERO1BQ86YB8 467 aa23.22■■□□□ 1.31
EDEM3-206ENST00000474725 PRPF38AQ8NAV1 312 aaKnown RBP23.22■■□□□ 1.31
EDEM3-206ENST00000474725 BICD2Q8TD16 824 aa23.22■■□□□ 1.31
EDEM3-206ENST00000474725 PGBD1Q96JS3 809 aa23.22■■□□□ 1.31
EDEM3-206ENST00000474725 RIC8AQ9NPQ8 531 aa23.22■■□□□ 1.31
EDEM3-206ENST00000474725 BIN2Q9UBW5 565 aaPredicted RBP23.22■■□□□ 1.31
EDEM3-206ENST00000474725 FLOT1O75955 427 aa23.21■■□□□ 1.31
EDEM3-206ENST00000474725 PPATQ06203 517 aa23.21■■□□□ 1.31
EDEM3-206ENST00000474725 LDLRAD1Q5T700 205 aa23.21■■□□□ 1.31
EDEM3-206ENST00000474725 RBM46Q8TBY0 533 aaKnown RBP23.21■■□□□ 1.31
EDEM3-206ENST00000474725 OTUD5Q96G74 571 aa23.21■■□□□ 1.31
EDEM3-206ENST00000474725 NOL7Q9UMY1 257 aaKnown RBP23.21■■□□□ 1.31
EDEM3-206ENST00000474725 PCDHB6Q9Y5E3 794 aa23.21■■□□□ 1.31
EDEM3-206ENST00000474725 CCDC194A0A1B0GVG4 234 aa23.21■■□□□ 1.31
EDEM3-206ENST00000474725 SPDYE5A6NIY4 337 aa23.21■■□□□ 1.31
EDEM3-206ENST00000474725 SLC39A14Q15043 492 aa23.21■■□□□ 1.31
EDEM3-206ENST00000474725 PTPAQ15257 358 aa23.21■■□□□ 1.31
EDEM3-206ENST00000474725 KLHL40Q2TBA0 621 aa23.21■■□□□ 1.31
EDEM3-206ENST00000474725 PSTPIP2Q9H939 334 aa23.21■■□□□ 1.31
EDEM3-206ENST00000474725 TMEM260Q9NX78 707 aa23.21■■□□□ 1.31
EDEM3-206ENST00000474725 SPTLC2O15270 562 aa23.2■■□□□ 1.3
EDEM3-206ENST00000474725 JAKMIP3Q5VZ66 844 aa23.2■■□□□ 1.3
EDEM3-206ENST00000474725 REXO1Q8N1G1 1221 aaKnown RBP23.2■■□□□ 1.3
EDEM3-206ENST00000474725 CUL5Q93034 780 aa23.2■■□□□ 1.3
EDEM3-206ENST00000474725 WNT7AO00755 349 aa23.2■■□□□ 1.3
EDEM3-206ENST00000474725 MRPL12P52815 198 aaKnown RBP23.2■■□□□ 1.3
EDEM3-206ENST00000474725 KRT25Q7Z3Z0 450 aa23.2■■□□□ 1.3
EDEM3-206ENST00000474725 KCNG4Q8TDN1 519 aa23.2■■□□□ 1.3
EDEM3-206ENST00000474725 PPP1R9AQ9ULJ8 1098 aa23.2■■□□□ 1.3
EDEM3-206ENST00000474725 IRF6O14896 467 aa23.19■■□□□ 1.3
EDEM3-206ENST00000474725 MBD3O95983 291 aa23.19■■□□□ 1.3
EDEM3-206ENST00000474725 ME1P48163 572 aa23.19■■□□□ 1.3
EDEM3-206ENST00000474725 UBE2SQ16763 222 aa23.19■■□□□ 1.3
EDEM3-206ENST00000474725 GOLGA6L4A6NEF3 574 aa23.18■■□□□ 1.3
EDEM3-206ENST00000474725 TTC38Q5R3I4 469 aa23.18■■□□□ 1.3
EDEM3-206ENST00000474725 OPTNQ96CV9 577 aa23.18■■□□□ 1.3
EDEM3-206ENST00000474725 PCDHA7Q9UN72 937 aa23.18■■□□□ 1.3
EDEM3-206ENST00000474725 MARCKSP29966 332 aaPredicted RBP23.18■■□□□ 1.3
EDEM3-206ENST00000474725 TRAPPC10P48553 1259 aa23.18■■□□□ 1.3
EDEM3-206ENST00000474725 CLK2P49760 499 aaKnown RBP23.18■■□□□ 1.3
EDEM3-206ENST00000474725 ZNF174Q15697 407 aa23.18■■□□□ 1.3
EDEM3-206ENST00000474725 INF2Q27J81 1249 aa23.18■■□□□ 1.3
EDEM3-206ENST00000474725 CATSPERGQ6ZRH7 1159 aa23.18■■□□□ 1.3
EDEM3-206ENST00000474725 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.18■■□□□ 1.3
EDEM3-206ENST00000474725 TRAF1Q13077 416 aa23.17■■□□□ 1.3
EDEM3-206ENST00000474725 PPIL2Q13356 520 aa23.17■■□□□ 1.3
EDEM3-206ENST00000474725 GBA2Q9HCG7 927 aaPredicted RBP23.17■■□□□ 1.3
EDEM3-206ENST00000474725 ZNF536O15090 1300 aa23.17■■□□□ 1.3
EDEM3-206ENST00000474725 USP17L15C9J2P7 530 aa23.16■■□□□ 1.3
EDEM3-206ENST00000474725 USP17L13C9JLJ4 530 aa23.16■■□□□ 1.3
EDEM3-206ENST00000474725 USP17L11C9JVI0 530 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms