RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 ARMCX2Q7L311 632 aa16.69■□□□□ 0.26
CCDC78-209ENST00000474647 ZNF467Q7Z7K2 595 aaPredicted RBP16.69■□□□□ 0.26
CCDC78-209ENST00000474647 CHMP4CQ96CF2 233 aa16.69■□□□□ 0.26
CCDC78-209ENST00000474647 PPP1R12CQ9BZL4 782 aa16.69■□□□□ 0.26
CCDC78-209ENST00000474647 ABHD16BQ9H3Z7 469 aa16.69■□□□□ 0.26
CCDC78-209ENST00000474647 SLC38A10Q9HBR0 1119 aa16.69■□□□□ 0.26
CCDC78-209ENST00000474647 ZNF287Q9HBT7 754 aa16.69■□□□□ 0.26
CCDC78-209ENST00000474647 FBXO40Q9UH90 709 aa16.69■□□□□ 0.26
CCDC78-209ENST00000474647 FEM1BQ9UK73 627 aa16.69■□□□□ 0.26
CCDC78-209ENST00000474647 TBX21Q9UL17 535 aa16.69■□□□□ 0.26
CCDC78-209ENST00000474647 MUC3AQ02505 3323 aa16.69■□□□□ 0.26
CCDC78-209ENST00000474647 ELP1O95163 1332 aa16.69■□□□□ 0.26
CCDC78-209ENST00000474647 CHD7Q9P2D1 2997 aa16.68■□□□□ 0.26
CCDC78-209ENST00000474647 IGKV6D-41A0A0C4DH26 115 aa16.68■□□□□ 0.26
CCDC78-209ENST00000474647 A0A0U1RQG5 324 aaPredicted RBP16.68■□□□□ 0.26
CCDC78-209ENST00000474647 M0R2C6 588 aa16.68■□□□□ 0.26
CCDC78-209ENST00000474647 CST5P28325 142 aaPredicted RBP16.68■□□□□ 0.26
CCDC78-209ENST00000474647 IKQ13123 557 aaPredicted RBP16.68■□□□□ 0.26
CCDC78-209ENST00000474647 PPIGQ13427 754 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCDC78-209ENST00000474647 GNASQ5JWF2 1037 aa16.68■□□□□ 0.26
CCDC78-209ENST00000474647 MFSD5Q6N075 450 aa16.68■□□□□ 0.26
CCDC78-209ENST00000474647 CCDC144CPQ8IYA2 1237 aa16.68■□□□□ 0.26
CCDC78-209ENST00000474647 TIFAQ96CG3 184 aa16.68■□□□□ 0.26
CCDC78-209ENST00000474647 FGD4Q96M96 766 aa16.68■□□□□ 0.26
CCDC78-209ENST00000474647 ZNF576Q9H609 170 aa16.68■□□□□ 0.26
CCDC78-209ENST00000474647 TLR3O15455 904 aaKnown RBP16.67■□□□□ 0.26
CCDC78-209ENST00000474647 RNF113AO15541 343 aaKnown RBP16.67■□□□□ 0.26
CCDC78-209ENST00000474647 TTLL1O95922 423 aa16.67■□□□□ 0.26
CCDC78-209ENST00000474647 TSPY3P0CV98 308 aa16.67■□□□□ 0.26
CCDC78-209ENST00000474647 TSPY8P0CW00 308 aa16.67■□□□□ 0.26
CCDC78-209ENST00000474647 GNAT2P19087 354 aa16.67■□□□□ 0.26
CCDC78-209ENST00000474647 C20orf194Q5TEA3 1177 aa16.67■□□□□ 0.26
CCDC78-209ENST00000474647 CCDC174Q6PII3 467 aa16.67■□□□□ 0.26
CCDC78-209ENST00000474647 NOL8Q76FK4 1167 aaKnown RBP16.67■□□□□ 0.26
CCDC78-209ENST00000474647 USP38Q8NB14 1042 aa16.67■□□□□ 0.26
CCDC78-209ENST00000474647 CHST13Q8NET6 341 aa16.67■□□□□ 0.26
CCDC78-209ENST00000474647 UPF3AQ9H1J1 476 aaKnown RBP16.67■□□□□ 0.26
CCDC78-209ENST00000474647 MTMR4Q9NYA4 1195 aa16.67■□□□□ 0.26
CCDC78-209ENST00000474647 RCAN3Q9UKA8 241 aa16.67■□□□□ 0.26
CCDC78-209ENST00000474647 TCF20Q9UGU0 1960 aaKnown RBP16.67■□□□□ 0.26
CCDC78-209ENST00000474647 TANC1Q9C0D5 1861 aa16.67■□□□□ 0.26
CCDC78-209ENST00000474647 PLIN4Q96Q06 1357 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 GRXCR1A8MXD5 290 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 TMEM232C9JQI7 657 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 ARVCFO00192 962 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 ACRP10323 421 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 BMP3P12645 472 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 CSF2RAP15509 400 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 OAZ1P54368 228 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 GJA9P57773 515 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 BEX3Q00994 111 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 SLFN13Q68D06 897 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.66■□□□□ 0.26
CCDC78-209ENST00000474647 TMEM199Q8N511 208 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 GMCL1P1Q8NEA9 526 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 PPM1EQ8WY54 764 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 SYMPKQ92797 1274 aaKnown RBP16.66■□□□□ 0.26
CCDC78-209ENST00000474647 ACAD9Q9H845 621 aa16.66■□□□□ 0.26
CCDC78-209ENST00000474647 TRANK1O15050 2925 aa16.65■□□□□ 0.26
CCDC78-209ENST00000474647 ZFYP08048 801 aaPredicted RBP16.65■□□□□ 0.26
CCDC78-209ENST00000474647 PBX2P40425 430 aa16.65■□□□□ 0.26
CCDC78-209ENST00000474647 CDK7P50613 346 aa16.65■□□□□ 0.26
CCDC78-209ENST00000474647 STAT2P52630 851 aa16.65■□□□□ 0.26
CCDC78-209ENST00000474647 CNTN2Q02246 1040 aa16.65■□□□□ 0.26
CCDC78-209ENST00000474647 PDE4BQ07343 736 aa16.65■□□□□ 0.26
CCDC78-209ENST00000474647 TMEM240Q5SV17 173 aa16.65■□□□□ 0.26
CCDC78-209ENST00000474647 FAM126BQ8IXS8 530 aa16.65■□□□□ 0.26
CCDC78-209ENST00000474647 MKL1Q969V6 931 aa16.65■□□□□ 0.26
CCDC78-209ENST00000474647 GAS2L1Q99501 681 aaPredicted RBP16.65■□□□□ 0.26
CCDC78-209ENST00000474647 PBX4Q9BYU1 374 aa16.65■□□□□ 0.26
CCDC78-209ENST00000474647 RNF146Q9NTX7 359 aa16.65■□□□□ 0.26
CCDC78-209ENST00000474647 TTC28Q96AY4 2481 aa16.64■□□□□ 0.26
CCDC78-209ENST00000474647 TRIP12Q14669 1992 aaPredicted RBP16.64■□□□□ 0.25
CCDC78-209ENST00000474647 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.64■□□□□ 0.25
CCDC78-209ENST00000474647 TNFAIP2Q03169 654 aa16.64■□□□□ 0.25
CCDC78-209ENST00000474647 PSRC1Q6PGN9 363 aaPredicted RBP16.64■□□□□ 0.25
CCDC78-209ENST00000474647 C16orf59Q7L2K0 433 aa16.64■□□□□ 0.25
CCDC78-209ENST00000474647 IFNL3Q8IZI9 196 aa16.64■□□□□ 0.25
CCDC78-209ENST00000474647 AGBL1Q96MI9 1066 aa16.64■□□□□ 0.25
CCDC78-209ENST00000474647 SEC62Q99442 399 aaKnown RBP16.64■□□□□ 0.25
CCDC78-209ENST00000474647 NACAP1Q9BZK3 213 aa16.64■□□□□ 0.25
CCDC78-209ENST00000474647 NAPBQ9H115 298 aa16.64■□□□□ 0.25
CCDC78-209ENST00000474647 A1CFQ9NQ94 594 aaKnown RBP16.64■□□□□ 0.25
CCDC78-209ENST00000474647 SYNPO2Q9UMS6 1093 aa16.64■□□□□ 0.25
CCDC78-209ENST00000474647 PATL2C9JE40 543 aaKnown RBP16.63■□□□□ 0.25
CCDC78-209ENST00000474647 SLC3A2P08195 630 aaKnown RBP16.63■□□□□ 0.25
CCDC78-209ENST00000474647 ALAS1P13196 640 aa16.63■□□□□ 0.25
CCDC78-209ENST00000474647 CYP2C18P33260 490 aa16.63■□□□□ 0.25
CCDC78-209ENST00000474647 TFAP4Q01664 338 aa16.63■□□□□ 0.25
CCDC78-209ENST00000474647 LRRFIP1Q32MZ4 808 aaKnown RBP16.63■□□□□ 0.25
CCDC78-209ENST00000474647 CXCL17Q6UXB2 119 aa16.63■□□□□ 0.25
CCDC78-209ENST00000474647 ZNF365Q70YC5 407 aa16.63■□□□□ 0.25
CCDC78-209ENST00000474647 TLK2Q86UE8 772 aa16.63■□□□□ 0.25
CCDC78-209ENST00000474647 NEDD1Q8NHV4 660 aa16.63■□□□□ 0.25
CCDC78-209ENST00000474647 KATNBL1Q9H079 304 aa16.63■□□□□ 0.25
CCDC78-209ENST00000474647 PRDM12Q9H4Q4 367 aa16.63■□□□□ 0.25
CCDC78-209ENST00000474647 MTMR7Q9Y216 660 aa16.63■□□□□ 0.25
CCDC78-209ENST00000474647 DDX49Q9Y6V7 483 aaKnown RBP16.63■□□□□ 0.25
CCDC78-209ENST00000474647 CTAGE5O15320 804 aa16.62■□□□□ 0.25
CCDC78-209ENST00000474647 FDX1P10109 184 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms