RNA–Protein interactions for RNA: ENST00000474194.1

RFWD2-207, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 3

Gene RFWD2, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-207ENST00000474194 KIF5BP33176 963 aa29.4■■■□□ 2.3
RFWD2-207ENST00000474194 RBM25P49756 843 aaKnown RBP29.4■■■□□ 2.3
RFWD2-207ENST00000474194 PRKCZQ05513 592 aa29.4■■■□□ 2.3
RFWD2-207ENST00000474194 NBPF11Q86T75 865 aa29.4■■■□□ 2.3
RFWD2-207ENST00000474194 AGBL1Q96MI9 1066 aa29.4■■■□□ 2.3
RFWD2-207ENST00000474194 MROH8Q9H579 483 aa29.4■■■□□ 2.3
RFWD2-207ENST00000474194 JMJD4Q9H9V9 463 aa29.4■■■□□ 2.3
RFWD2-207ENST00000474194 GABRQQ9UN88 632 aa29.4■■■□□ 2.3
RFWD2-207ENST00000474194 BAZ2BQ9UIF8 2168 aaKnown RBP29.4■■■□□ 2.3
RFWD2-207ENST00000474194 MYH6P13533 1939 aa29.39■■■□□ 2.3
RFWD2-207ENST00000474194 ZBTB43O43298 467 aa29.39■■■□□ 2.3
RFWD2-207ENST00000474194 TAL1P17542 331 aaPredicted RBP29.39■■■□□ 2.3
RFWD2-207ENST00000474194 HOXD10P28358 340 aa29.39■■■□□ 2.3
RFWD2-207ENST00000474194 SLC4A3P48751 1232 aa29.39■■■□□ 2.3
RFWD2-207ENST00000474194 FANCBQ8NB91 859 aa29.39■■■□□ 2.3
RFWD2-207ENST00000474194 UPF2Q9HAU5 1272 aaKnown RBP29.39■■■□□ 2.3
RFWD2-207ENST00000474194 CWC22Q9HCG8 908 aaKnown RBP29.39■■■□□ 2.3
RFWD2-207ENST00000474194 PTPN22Q9Y2R2 807 aa29.39■■■□□ 2.3
RFWD2-207ENST00000474194 CYTH3O43739 400 aa29.38■■■□□ 2.29
RFWD2-207ENST00000474194 DHX16O60231 1041 aaKnown RBP29.38■■■□□ 2.29
RFWD2-207ENST00000474194 ICAM1P05362 532 aa29.38■■■□□ 2.29
RFWD2-207ENST00000474194 COPB2P35606 906 aa29.38■■■□□ 2.29
RFWD2-207ENST00000474194 CDC37Q16543 378 aaPredicted RBP29.38■■■□□ 2.29
RFWD2-207ENST00000474194 KIF2CQ99661 725 aa29.38■■■□□ 2.29
RFWD2-207ENST00000474194 VAT1LQ9HCJ6 419 aa29.38■■■□□ 2.29
RFWD2-207ENST00000474194 GJD2Q9UKL4 321 aa29.38■■■□□ 2.29
RFWD2-207ENST00000474194 ZNF236Q9UL36 1845 aa29.37■■■□□ 2.29
RFWD2-207ENST00000474194 PLEKHA8P1O95397 391 aa29.37■■■□□ 2.29
RFWD2-207ENST00000474194 PTPREP23469 700 aa29.37■■■□□ 2.29
RFWD2-207ENST00000474194 RCAN1P53805 252 aa29.37■■■□□ 2.29
RFWD2-207ENST00000474194 PRMT2P55345 433 aa29.37■■■□□ 2.29
RFWD2-207ENST00000474194 EVCP57679 992 aa29.37■■■□□ 2.29
RFWD2-207ENST00000474194 MORN1Q5T089 497 aa29.37■■■□□ 2.29
RFWD2-207ENST00000474194 MCOLN1Q9GZU1 580 aa29.37■■■□□ 2.29
RFWD2-207ENST00000474194 RIOX1Q9H6W3 641 aa29.37■■■□□ 2.29
RFWD2-207ENST00000474194 CCPG1Q9ULG6 757 aa29.37■■■□□ 2.29
RFWD2-207ENST00000474194 NAP1L2Q9ULW6 460 aaPredicted RBP29.37■■■□□ 2.29
RFWD2-207ENST00000474194 GOLGA8AA7E2F4 631 aa29.36■■■□□ 2.29
RFWD2-207ENST00000474194 GOLGA8BA8MQT2 603 aa29.36■■■□□ 2.29
RFWD2-207ENST00000474194 FLT3LGP49771 235 aa29.36■■■□□ 2.29
RFWD2-207ENST00000474194 GNAQP50148 359 aa29.36■■■□□ 2.29
RFWD2-207ENST00000474194 PKN2Q16513 984 aaKnown RBP29.36■■■□□ 2.29
RFWD2-207ENST00000474194 FBXO46Q6PJ61 603 aaPredicted RBP29.36■■■□□ 2.29
RFWD2-207ENST00000474194 MTMR8Q96EF0 704 aa29.36■■■□□ 2.29
RFWD2-207ENST00000474194 HPS5Q9UPZ3 1129 aa29.36■■■□□ 2.29
RFWD2-207ENST00000474194 PTCH2Q9Y6C5 1203 aa29.36■■■□□ 2.29
RFWD2-207ENST00000474194 IVNS1ABPQ9Y6Y0 642 aa29.36■■■□□ 2.29
RFWD2-207ENST00000474194 HTTP42858 3142 aa29.36■■■□□ 2.29
RFWD2-207ENST00000474194 GRB14Q14449 540 aa29.35■■■□□ 2.29
RFWD2-207ENST00000474194 RTN1Q16799 776 aa29.35■■■□□ 2.29
RFWD2-207ENST00000474194 QRICH1Q2TAL8 776 aa29.35■■■□□ 2.29
RFWD2-207ENST00000474194 TMTC3Q6ZXV5 915 aa29.35■■■□□ 2.29
RFWD2-207ENST00000474194 CMTR1Q8N1G2 835 aaKnown RBP29.35■■■□□ 2.29
RFWD2-207ENST00000474194 SRBD1Q8N5C6 995 aaKnown RBP29.35■■■□□ 2.29
RFWD2-207ENST00000474194 SOCS4Q8WXH5 440 aa29.35■■■□□ 2.29
RFWD2-207ENST00000474194 ALDH8A1Q9H2A2 487 aaPredicted RBP29.35■■■□□ 2.29
RFWD2-207ENST00000474194 HOMER2Q9NSB8 354 aa29.35■■■□□ 2.29
RFWD2-207ENST00000474194 NID2Q14112 1375 aa29.35■■■□□ 2.29
RFWD2-207ENST00000474194 ZNFX1Q9P2E3 1918 aaKnown RBP29.35■■■□□ 2.29
RFWD2-207ENST00000474194 SLC15A5A6NIM6 579 aa29.34■■■□□ 2.29
RFWD2-207ENST00000474194 ALAS1P13196 640 aa29.34■■■□□ 2.29
RFWD2-207ENST00000474194 USP6NLQ92738 828 aa29.34■■■□□ 2.29
RFWD2-207ENST00000474194 NUDT12Q9BQG2 462 aa29.34■■■□□ 2.29
RFWD2-207ENST00000474194 LZTS2Q9BRK4 669 aa29.34■■■□□ 2.29
RFWD2-207ENST00000474194 LARP6Q9BRS8 491 aaKnown RBP29.34■■■□□ 2.29
RFWD2-207ENST00000474194 SPZ1Q9BXG8 430 aa29.34■■■□□ 2.29
RFWD2-207ENST00000474194 RNF146Q9NTX7 359 aa29.34■■■□□ 2.29
RFWD2-207ENST00000474194 FAM217BQ9NTX9 383 aaPredicted RBP29.34■■■□□ 2.29
RFWD2-207ENST00000474194 RBM28Q9NW13 759 aaKnown RBP29.34■■■□□ 2.29
RFWD2-207ENST00000474194 METAP2P50579 478 aaKnown RBP eCLIP29.33■■■□□ 2.29
RFWD2-207ENST00000474194 NEK4P51957 841 aa29.33■■■□□ 2.29
RFWD2-207ENST00000474194 TKFCQ3LXA3 575 aa29.33■■■□□ 2.29
RFWD2-207ENST00000474194 CHST13Q8NET6 341 aa29.33■■■□□ 2.29
RFWD2-207ENST00000474194 TBC1D32Q96NH3 1257 aa29.33■■■□□ 2.29
RFWD2-207ENST00000474194 TRERF1Q96PN7 1200 aa29.33■■■□□ 2.29
RFWD2-207ENST00000474194 PIGSQ96S52 555 aa29.33■■■□□ 2.29
RFWD2-207ENST00000474194 STRNO43815 780 aa29.32■■■□□ 2.28
RFWD2-207ENST00000474194 SMARCA1P28370 1054 aa29.32■■■□□ 2.28
RFWD2-207ENST00000474194 CDC27P30260 824 aa29.32■■■□□ 2.28
RFWD2-207ENST00000474194 AK2P54819 239 aa29.32■■■□□ 2.28
RFWD2-207ENST00000474194 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.32■■■□□ 2.286e-8■■■■□ 23.8
RFWD2-207ENST00000474194 HOMER1Q86YM7 354 aa29.32■■■□□ 2.28
RFWD2-207ENST00000474194 ABRAQ8N0Z2 381 aa29.32■■■□□ 2.28
RFWD2-207ENST00000474194 RAET1EQ8TD07 263 aa29.32■■■□□ 2.28
RFWD2-207ENST00000474194 MMP19Q99542 508 aa29.32■■■□□ 2.28
RFWD2-207ENST00000474194 ZBTB5O15062 677 aa29.31■■■□□ 2.28
RFWD2-207ENST00000474194 FCER1AP12319 257 aa29.31■■■□□ 2.28
RFWD2-207ENST00000474194 CYP2B6P20813 491 aa29.31■■■□□ 2.28
RFWD2-207ENST00000474194 ADORA2AP29274 412 aa29.31■■■□□ 2.28
RFWD2-207ENST00000474194 PDIA3P30101 505 aaKnown RBP29.31■■■□□ 2.28
RFWD2-207ENST00000474194 MAP2K5Q13163 448 aa29.31■■■□□ 2.28
RFWD2-207ENST00000474194 IRF5Q13568 498 aa29.31■■■□□ 2.28
RFWD2-207ENST00000474194 MUM1L1Q5H9M0 696 aa29.31■■■□□ 2.28
RFWD2-207ENST00000474194 ACAD9Q9H845 621 aa29.31■■■□□ 2.28
RFWD2-207ENST00000474194 FBXO40Q9UH90 709 aa29.31■■■□□ 2.28
RFWD2-207ENST00000474194 PNMA2Q9UL42 364 aa29.31■■■□□ 2.28
RFWD2-207ENST00000474194 PPP1R11O60927 126 aaPredicted RBP29.3■■■□□ 2.28
RFWD2-207ENST00000474194 RGS2P41220 211 aa29.3■■■□□ 2.28
RFWD2-207ENST00000474194 USH1GQ495M9 461 aa29.3■■■□□ 2.28
RFWD2-207ENST00000474194 CNTNAP5Q8WYK1 1306 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms