RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 TRPV1Q8NER1 839 aa21.85■■□□□ 1.09
CCDC171-206ENST00000474193 DNM1LO00429 736 aa21.84■■□□□ 1.09
CCDC171-206ENST00000474193 MYCNP04198 464 aaPredicted RBP21.84■■□□□ 1.09
CCDC171-206ENST00000474193 RARBP10826 455 aa21.84■■□□□ 1.09
CCDC171-206ENST00000474193 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.84■■□□□ 1.09
CCDC171-206ENST00000474193 ZNF467Q7Z7K2 595 aaPredicted RBP21.84■■□□□ 1.09
CCDC171-206ENST00000474193 TRERF1Q96PN7 1200 aa21.84■■□□□ 1.09
CCDC171-206ENST00000474193 KAT14Q9H8E8 782 aa21.84■■□□□ 1.09
CCDC171-206ENST00000474193 GPCPD1Q9NPB8 672 aa21.84■■□□□ 1.09
CCDC171-206ENST00000474193 RNF146Q9NTX7 359 aa21.84■■□□□ 1.09
CCDC171-206ENST00000474193 B4E1Z4 1266 aa21.83■■□□□ 1.09
CCDC171-206ENST00000474193 POTEB2H3BUK9 544 aa21.83■■□□□ 1.09
CCDC171-206ENST00000474193 GPATCH4Q5T3I0 446 aaKnown RBP21.83■■□□□ 1.09
CCDC171-206ENST00000474193 SYDE2Q5VT97 1194 aa21.83■■□□□ 1.09
CCDC171-206ENST00000474193 AGBL1Q96MI9 1066 aa21.83■■□□□ 1.09
CCDC171-206ENST00000474193 ZKSCAN3Q9BRR0 538 aa21.83■■□□□ 1.09
CCDC171-206ENST00000474193 UBAC1Q9BSL1 405 aa21.83■■□□□ 1.09
CCDC171-206ENST00000474193 SENP6Q9GZR1 1112 aaPredicted RBP21.83■■□□□ 1.09
CCDC171-206ENST00000474193 CCPG1Q9ULG6 757 aa21.83■■□□□ 1.09
CCDC171-206ENST00000474193 U3KPZ7 1027 aaPredicted RBP21.83■■□□□ 1.09
CCDC171-206ENST00000474193 MKI67P46013 3256 aaKnown RBP21.83■■□□□ 1.08
CCDC171-206ENST00000474193 NEDD4P46934 1319 aa21.82■■□□□ 1.08
CCDC171-206ENST00000474193 SYNGAP1Q96PV0 1343 aa21.82■■□□□ 1.08
CCDC171-206ENST00000474193 DNAJC25-GNG10A0A024R161 153 aa21.82■■□□□ 1.08
CCDC171-206ENST00000474193 SGSM2O43147 1006 aa21.82■■□□□ 1.08
CCDC171-206ENST00000474193 AKR1A1P14550 325 aa21.82■■□□□ 1.08
CCDC171-206ENST00000474193 MNX1P50219 401 aaPredicted RBP21.82■■□□□ 1.08
CCDC171-206ENST00000474193 HABP4Q5JVS0 413 aaKnown RBP21.82■■□□□ 1.08
CCDC171-206ENST00000474193 BTNL9Q6UXG8 535 aa21.82■■□□□ 1.08
CCDC171-206ENST00000474193 C7orf61Q8IZ16 206 aa21.82■■□□□ 1.08
CCDC171-206ENST00000474193 ZSCAN10Q96SZ4 725 aaPredicted RBP21.82■■□□□ 1.08
CCDC171-206ENST00000474193 ZSWIM5Q9P217 1185 aa21.82■■□□□ 1.08
CCDC171-206ENST00000474193 PFASO15067 1338 aa21.81■■□□□ 1.08
CCDC171-206ENST00000474193 FRMPD2Q68DX3 1309 aaPredicted RBP21.81■■□□□ 1.08
CCDC171-206ENST00000474193 CEP290O15078 2479 aa21.81■■□□□ 1.08
CCDC171-206ENST00000474193 ICAM1P05362 532 aa21.81■■□□□ 1.08
CCDC171-206ENST00000474193 PDHBP11177 359 aa21.81■■□□□ 1.08
CCDC171-206ENST00000474193 COL6A1P12109 1028 aa21.81■■□□□ 1.08
CCDC171-206ENST00000474193 SLC16A2P36021 539 aa21.81■■□□□ 1.08
CCDC171-206ENST00000474193 ANO1Q5XXA6 986 aa21.81■■□□□ 1.08
CCDC171-206ENST00000474193 MAMDC4Q6UXC1 1216 aa21.81■■□□□ 1.08
CCDC171-206ENST00000474193 ESYT1Q9BSJ8 1104 aa21.81■■□□□ 1.08
CCDC171-206ENST00000474193 FAM184BQ9ULE4 1060 aa21.81■■□□□ 1.08
CCDC171-206ENST00000474193 COLQQ9Y215 455 aaPredicted RBP21.81■■□□□ 1.08
CCDC171-206ENST00000474193 PLXNA1Q9UIW2 1896 aa21.81■■□□□ 1.08
CCDC171-206ENST00000474193 ZNF543Q08ER8 600 aa21.8■■□□□ 1.08
CCDC171-206ENST00000474193 GJC2Q5T442 439 aaPredicted RBP21.8■■□□□ 1.08
CCDC171-206ENST00000474193 TTBK2Q6IQ55 1244 aa21.8■■□□□ 1.08
CCDC171-206ENST00000474193 CHRDL2Q6WN34 429 aa21.8■■□□□ 1.08
CCDC171-206ENST00000474193 RNF180Q86T96 592 aa21.8■■□□□ 1.08
CCDC171-206ENST00000474193 PNMA1Q8ND90 353 aa21.8■■□□□ 1.08
CCDC171-206ENST00000474193 ABHD16BQ9H3Z7 469 aa21.8■■□□□ 1.08
CCDC171-206ENST00000474193 XPNPEP3Q9NQH7 507 aa21.8■■□□□ 1.08
CCDC171-206ENST00000474193 ZNF536O15090 1300 aa21.8■■□□□ 1.08
CCDC171-206ENST00000474193 ASB14A6NK59 587 aa21.79■■□□□ 1.08
CCDC171-206ENST00000474193 SNAP25P60880 206 aa21.79■■□□□ 1.08
CCDC171-206ENST00000474193 RANBP17Q9H2T7 1088 aaKnown RBP21.79■■□□□ 1.08
CCDC171-206ENST00000474193 ZHX1Q9UKY1 873 aaPredicted RBP21.79■■□□□ 1.08
CCDC171-206ENST00000474193 ERICH2A1L162 156 aa21.78■■□□□ 1.08
CCDC171-206ENST00000474193 EIF5BO60841 1220 aaKnown RBP21.78■■□□□ 1.08
CCDC171-206ENST00000474193 NSMFQ6X4W1 530 aa21.78■■□□□ 1.08
CCDC171-206ENST00000474193 RALYLQ86SE5 291 aaKnown RBP21.78■■□□□ 1.08
CCDC171-206ENST00000474193 ANKS1AQ92625 1134 aa21.78■■□□□ 1.08
CCDC171-206ENST00000474193 SPC25Q9HBM1 224 aa21.78■■□□□ 1.08
CCDC171-206ENST00000474193 A1CFQ9NQ94 594 aaKnown RBP21.78■■□□□ 1.08
CCDC171-206ENST00000474193 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.78■■□□□ 1.08
CCDC171-206ENST00000474193 ZNF865P0CJ78 1059 aaPredicted RBP21.77■■□□□ 1.08
CCDC171-206ENST00000474193 SNHG28P0DPA3 235 aa21.77■■□□□ 1.08
CCDC171-206ENST00000474193 ACVR2BQ13705 512 aa21.77■■□□□ 1.08
CCDC171-206ENST00000474193 IFIT1BQ5T764 474 aaKnown RBP21.77■■□□□ 1.08
CCDC171-206ENST00000474193 RASGRP2Q7LDG7 609 aa21.77■■□□□ 1.08
CCDC171-206ENST00000474193 ANO2Q9NQ90 1003 aa21.77■■□□□ 1.08
CCDC171-206ENST00000474193 ADD3Q9UEY8 706 aaKnown RBP21.77■■□□□ 1.08
CCDC171-206ENST00000474193 PRKAG2Q9UGJ0 569 aa21.77■■□□□ 1.08
CCDC171-206ENST00000474193 TNKSO95271 1327 aa21.77■■□□□ 1.07
CCDC171-206ENST00000474193 LAMA4Q16363 1823 aa21.76■■□□□ 1.07
CCDC171-206ENST00000474193 DHX16O60231 1041 aaKnown RBP21.76■■□□□ 1.07
CCDC171-206ENST00000474193 SNAI1O95863 264 aaPredicted RBP21.76■■□□□ 1.07
CCDC171-206ENST00000474193 TAL1P17542 331 aaPredicted RBP21.76■■□□□ 1.07
CCDC171-206ENST00000474193 SART3Q15020 963 aaKnown RBP21.76■■□□□ 1.07
CCDC171-206ENST00000474193 LRRC41Q15345 812 aa21.76■■□□□ 1.07
CCDC171-206ENST00000474193 ASPRV1Q53RT3 343 aa21.76■■□□□ 1.07
CCDC171-206ENST00000474193 ARMCX2Q7L311 632 aa21.76■■□□□ 1.07
CCDC171-206ENST00000474193 MPHOSPH6Q99547 160 aaKnown RBP21.76■■□□□ 1.07
CCDC171-206ENST00000474193 ZMYND8Q9ULU4 1186 aaPredicted RBP21.76■■□□□ 1.07
CCDC171-206ENST00000474193 SMCHD1A6NHR9 2005 aa21.75■■□□□ 1.07
CCDC171-206ENST00000474193 PARP1P09874 1014 aaKnown RBP21.75■■□□□ 1.07
CCDC171-206ENST00000474193 ATN1P54259 1190 aaPredicted RBP21.75■■□□□ 1.07
CCDC171-206ENST00000474193 CNTN2Q02246 1040 aa21.75■■□□□ 1.07
CCDC171-206ENST00000474193 LRRC26Q2I0M4 334 aa21.75■■□□□ 1.07
CCDC171-206ENST00000474193 CCDC144CPQ8IYA2 1237 aa21.75■■□□□ 1.07
CCDC171-206ENST00000474193 ENAHQ8N8S7 591 aaPredicted RBP21.75■■□□□ 1.07
CCDC171-206ENST00000474193 FAM133AQ8N9E0 248 aa21.75■■□□□ 1.07
CCDC171-206ENST00000474193 NCOA7Q8NI08 942 aa21.75■■□□□ 1.07
CCDC171-206ENST00000474193 IL25Q9H293 177 aa21.75■■□□□ 1.07
CCDC171-206ENST00000474193 FRMPD3Q5JV73 1810 aa21.74■■□□□ 1.07
CCDC171-206ENST00000474193 B4DLN1 442 aa21.74■■□□□ 1.07
CCDC171-206ENST00000474193 REC8O95072 547 aa21.74■■□□□ 1.07
CCDC171-206ENST00000474193 GOLGA8HP0CJ92 632 aa21.74■■□□□ 1.07
CCDC171-206ENST00000474193 ADCYAP1R1P41586 468 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms