RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 TMX2Q9Y320 296 aa12.82□□□□□ -0.36
SSBP1-209ENST00000473783 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.82□□□□□ -0.36
SSBP1-209ENST00000473783 DNAJC25-GNG10A0A024R161 153 aa12.81□□□□□ -0.36
SSBP1-209ENST00000473783 GRXCR2A6NFK2 248 aa12.81□□□□□ -0.36
SSBP1-209ENST00000473783 VWA5AO00534 786 aa12.81□□□□□ -0.36
SSBP1-209ENST00000473783 GABPAQ06546 454 aa12.81□□□□□ -0.36
SSBP1-209ENST00000473783 TMEM179Q6ZVK1 233 aa12.81□□□□□ -0.36
SSBP1-209ENST00000473783 GDPD5Q8WTR4 605 aa12.81□□□□□ -0.36
SSBP1-209ENST00000473783 PRRX2Q99811 253 aa12.81□□□□□ -0.36
SSBP1-209ENST00000473783 TRPV6Q9H1D0 765 aa12.81□□□□□ -0.36
SSBP1-209ENST00000473783 ARHGEF10LQ9HCE6 1279 aa12.81□□□□□ -0.36
SSBP1-209ENST00000473783 SNRKQ9NRH2 765 aa12.81□□□□□ -0.36
SSBP1-209ENST00000473783 GRIN2DO15399 1336 aa12.81□□□□□ -0.36
SSBP1-209ENST00000473783 CYP2E1P05181 493 aaPredicted RBP12.8□□□□□ -0.36
SSBP1-209ENST00000473783 CYP7A1P22680 504 aa12.8□□□□□ -0.36
SSBP1-209ENST00000473783 RFC2P35250 354 aa12.8□□□□□ -0.36
SSBP1-209ENST00000473783 PLCD1P51178 756 aa12.8□□□□□ -0.36
SSBP1-209ENST00000473783 BEX3Q00994 111 aa12.8□□□□□ -0.36
SSBP1-209ENST00000473783 DEFB128Q7Z7B8 93 aa12.8□□□□□ -0.36
SSBP1-209ENST00000473783 PRSS33Q8NF86 280 aa12.8□□□□□ -0.36
SSBP1-209ENST00000473783 PRKAG3Q9UGI9 489 aa12.8□□□□□ -0.36
SSBP1-209ENST00000473783 SRGAP3O43295 1099 aa12.79□□□□□ -0.36
SSBP1-209ENST00000473783 GFRA3O60609 400 aa12.79□□□□□ -0.36
SSBP1-209ENST00000473783 SUPT20HL2P0C7V6 817 aa12.79□□□□□ -0.36
SSBP1-209ENST00000473783 TTC39AQ5SRH9 613 aa12.79□□□□□ -0.36
SSBP1-209ENST00000473783 SPRED2Q7Z698 418 aa12.79□□□□□ -0.36
SSBP1-209ENST00000473783 MIGA1Q8NAN2 632 aa12.79□□□□□ -0.36
SSBP1-209ENST00000473783 REPS2Q8NFH8 660 aa12.79□□□□□ -0.36
SSBP1-209ENST00000473783 ANKS1AQ92625 1134 aa12.79□□□□□ -0.36
SSBP1-209ENST00000473783 TEX13BQ9BXU2 312 aa12.79□□□□□ -0.36
SSBP1-209ENST00000473783 UPF3BQ9BZI7 483 aaKnown RBP12.79□□□□□ -0.36
SSBP1-209ENST00000473783 FBXO28Q9NVF7 368 aa12.79□□□□□ -0.36
SSBP1-209ENST00000473783 PPP1R9AQ9ULJ8 1098 aa12.79□□□□□ -0.36
SSBP1-209ENST00000473783 FAM50BQ9Y247 325 aa12.79□□□□□ -0.36
SSBP1-209ENST00000473783 C5orf42Q9H799 3197 aa12.79□□□□□ -0.36
SSBP1-209ENST00000473783 ZEB2O60315 1214 aa12.78□□□□□ -0.36
SSBP1-209ENST00000473783 BAIAP3O94812 1187 aa12.78□□□□□ -0.36
SSBP1-209ENST00000473783 POLR3DP05423 398 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-209ENST00000473783 ICA1Q05084 483 aa12.78□□□□□ -0.36
SSBP1-209ENST00000473783 ZP2Q05996 745 aa12.78□□□□□ -0.36
SSBP1-209ENST00000473783 MTX1Q13505 466 aa12.78□□□□□ -0.36
SSBP1-209ENST00000473783 CCDC158Q5M9N0 1113 aa12.78□□□□□ -0.36
SSBP1-209ENST00000473783 TMED8Q6PL24 325 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-209ENST00000473783 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.78□□□□□ -0.36
SSBP1-209ENST00000473783 ARMCX2Q7L311 632 aa12.78□□□□□ -0.36
SSBP1-209ENST00000473783 NEK9Q8TD19 979 aa12.78□□□□□ -0.36
SSBP1-209ENST00000473783 SSH1Q8WYL5 1049 aa12.78□□□□□ -0.36
SSBP1-209ENST00000473783 ALDH8A1Q9H2A2 487 aaPredicted RBP12.78□□□□□ -0.36
SSBP1-209ENST00000473783 ASTN1O14525 1302 aa12.78□□□□□ -0.36
SSBP1-209ENST00000473783 C19orf67A6NJJ6 358 aa12.77□□□□□ -0.37
SSBP1-209ENST00000473783 TNFAIP2Q03169 654 aa12.77□□□□□ -0.37
SSBP1-209ENST00000473783 PKN1Q16512 942 aa12.77□□□□□ -0.37
SSBP1-209ENST00000473783 FSCN1Q16658 493 aaKnown RBP12.77□□□□□ -0.37
SSBP1-209ENST00000473783 CCDC184Q52MB2 194 aa12.77□□□□□ -0.37
SSBP1-209ENST00000473783 ERMP1Q7Z2K6 904 aa12.77□□□□□ -0.37
SSBP1-209ENST00000473783 TLK2Q86UE8 772 aa12.77□□□□□ -0.37
SSBP1-209ENST00000473783 SIAH1Q8IUQ4 282 aa12.77□□□□□ -0.37
SSBP1-209ENST00000473783 ZNF512BQ96KM6 892 aaPredicted RBP12.77□□□□□ -0.37
SSBP1-209ENST00000473783 KATNBL1Q9H079 304 aa12.77□□□□□ -0.37
SSBP1-209ENST00000473783 SUGCTQ9HAC7 445 aa12.77□□□□□ -0.37
SSBP1-209ENST00000473783 PIH1D3Q9NQM4 214 aaKnown RBP12.77□□□□□ -0.37
SSBP1-209ENST00000473783 KMT2EQ8IZD2 1858 aa12.76□□□□□ -0.37
SSBP1-209ENST00000473783 TRIP12Q14669 1992 aaPredicted RBP12.76□□□□□ -0.37
SSBP1-209ENST00000473783 ZAP70P43403 619 aa12.76□□□□□ -0.37
SSBP1-209ENST00000473783 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
SSBP1-209ENST00000473783 NOL8Q76FK4 1167 aaKnown RBP12.76□□□□□ -0.37
SSBP1-209ENST00000473783 BMP8AQ7Z5Y6 402 aa12.76□□□□□ -0.37
SSBP1-209ENST00000473783 CLEC10AQ8IUN9 316 aa12.76□□□□□ -0.37
SSBP1-209ENST00000473783 ADHFE1Q8IWW8 467 aa12.76□□□□□ -0.37
SSBP1-209ENST00000473783 FGD4Q96M96 766 aa12.76□□□□□ -0.37
SSBP1-209ENST00000473783 TGS1Q96RS0 853 aaKnown RBP12.76□□□□□ -0.37
SSBP1-209ENST00000473783 AP5M1Q9H0R1 490 aa12.76□□□□□ -0.37
SSBP1-209ENST00000473783 SWAP70Q9UH65 585 aa12.76□□□□□ -0.37
SSBP1-209ENST00000473783 GNEQ9Y223 722 aaKnown RBP12.76□□□□□ -0.37
SSBP1-209ENST00000473783 TNKSO95271 1327 aa12.76□□□□□ -0.37
SSBP1-209ENST00000473783 SCN10AQ9Y5Y9 1956 aa12.76□□□□□ -0.37
SSBP1-209ENST00000473783 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.75□□□□□ -0.37
SSBP1-209ENST00000473783 LCHNA4D1U4 455 aa12.75□□□□□ -0.37
SSBP1-209ENST00000473783 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
SSBP1-209ENST00000473783 IDH1O75874 414 aaKnown RBP12.75□□□□□ -0.37
SSBP1-209ENST00000473783 CYP2C9P11712 490 aa12.75□□□□□ -0.37
SSBP1-209ENST00000473783 KCNJ6P48051 423 aa12.75□□□□□ -0.37
SSBP1-209ENST00000473783 ERVK-21P61565 698 aa12.75□□□□□ -0.37
SSBP1-209ENST00000473783 PSMC6P62333 389 aa12.75□□□□□ -0.37
SSBP1-209ENST00000473783 MYO7AQ13402 2215 aa12.75□□□□□ -0.37
SSBP1-209ENST00000473783 HERC4Q5GLZ8 1057 aaPredicted RBP12.75□□□□□ -0.37
SSBP1-209ENST00000473783 CCDC144CPQ8IYA2 1237 aa12.75□□□□□ -0.37
SSBP1-209ENST00000473783 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
SSBP1-209ENST00000473783 GPR108Q9NPR9 543 aa12.75□□□□□ -0.37
SSBP1-209ENST00000473783 EPG5Q9HCE0 2579 aa12.75□□□□□ -0.37
SSBP1-209ENST00000473783 GVINP1Q7Z2Y8 2422 aa12.74□□□□□ -0.37
SSBP1-209ENST00000473783 H3BQ06 376 aaPredicted RBP12.74□□□□□ -0.37
SSBP1-209ENST00000473783 ATP2A1O14983 1001 aa12.74□□□□□ -0.37
SSBP1-209ENST00000473783 IRS1P35568 1242 aa12.74□□□□□ -0.37
SSBP1-209ENST00000473783 TCF15Q12870 199 aa12.74□□□□□ -0.37
SSBP1-209ENST00000473783 G3BP1Q13283 466 aaKnown RBP eCLIP12.74□□□□□ -0.37
SSBP1-209ENST00000473783 ANKRD35Q8N283 1001 aa12.74□□□□□ -0.37
SSBP1-209ENST00000473783 MEIS3Q99687 375 aa12.74□□□□□ -0.37
SSBP1-209ENST00000473783 ZBED2Q9BTP6 218 aa12.74□□□□□ -0.37
SSBP1-209ENST00000473783 GOPCQ9HD26 462 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms