RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 TACO1Q9BSH4 297 aaKnown RBP6.84□□□□□ -1.31
HERC4-209ENST00000473533 DISC1Q9NRI5 854 aa6.84□□□□□ -1.31
HERC4-209ENST00000473533 HYOU1Q9Y4L1 999 aa6.84□□□□□ -1.31
HERC4-209ENST00000473533 MYH2Q9UKX2 1941 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 EPB41P11171 864 aaKnown RBP6.83□□□□□ -1.32
HERC4-209ENST00000473533 CCNE1P24864 410 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 EVA1CP58658 441 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 PKN1Q16512 942 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 CAVIN4Q5BKX8 364 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 FOXR2Q6PJQ5 311 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 LRRC31Q6UY01 552 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 SUGP1Q8IWZ8 645 aaKnown RBP6.83□□□□□ -1.32
HERC4-209ENST00000473533 DNAJC10Q8IXB1 793 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 CCDC82Q8N4S0 544 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 CRNKL1Q9BZJ0 848 aaKnown RBP6.83□□□□□ -1.32
HERC4-209ENST00000473533 JADE2Q9NQC1 790 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 ARPP21Q9UBL0 812 aaPredicted RBP6.83□□□□□ -1.32
HERC4-209ENST00000473533 DLEC1Q9Y238 1755 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 DUOX1Q9NRD9 1551 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 TTC26A0AVF1 554 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 MTIF2P46199 727 aaKnown RBP6.83□□□□□ -1.32
HERC4-209ENST00000473533 TBC1D8BQ0IIM8 1120 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 TADA2BQ86TJ2 420 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 BLIDQ8IZY5 108 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 ENAHQ8N8S7 591 aaPredicted RBP6.83□□□□□ -1.32
HERC4-209ENST00000473533 DAGLBQ8NCG7 672 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 ERGIC2Q96RQ1 377 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 ZKSCAN3Q9BRR0 538 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 CAPS2Q9BXY5 557 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 LRRIQ3A6PVS8 624 aaPredicted RBP6.83□□□□□ -1.32
HERC4-209ENST00000473533 GPTP24298 496 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 FUT2Q10981 343 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 PTPN21Q16825 1174 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 NCAPH2Q6IBW4 605 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 USP49Q70CQ1 688 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 RPAINQ86UA6 219 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 IFT20Q8IY31 132 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 ZNF34Q8IZ26 560 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 RNF10Q8N5U6 811 aaKnown RBP6.83□□□□□ -1.32
HERC4-209ENST00000473533 CSGALNACT2Q8N6G5 542 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 ARFGAP2Q8N6H7 521 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 NOA1Q8NC60 698 aaKnown RBP6.83□□□□□ -1.32
HERC4-209ENST00000473533 GIMAP8Q8ND71 665 aaPredicted RBP6.83□□□□□ -1.32
HERC4-209ENST00000473533 ZNF507Q8TCN5 953 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 PURBQ96QR8 312 aaKnown RBP6.83□□□□□ -1.32
HERC4-209ENST00000473533 SELENOOQ9BVL4 669 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 ATP8A2Q9NTI2 1148 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 PCDHA4Q9UN74 947 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 CNTNAP5Q8WYK1 1306 aa6.83□□□□□ -1.32
HERC4-209ENST00000473533 A0A087X0B3 334 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 PRPF6O94906 941 aaKnown RBP6.82□□□□□ -1.32
HERC4-209ENST00000473533 PRCPP42785 496 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 CDR1P51861 262 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 UBE4AQ14139 1066 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 MMS22LQ6ZRQ5 1243 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 PIK3AP1Q6ZUJ8 805 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 DZIP3Q86Y13 1208 aaKnown RBP6.82□□□□□ -1.32
HERC4-209ENST00000473533 CERS3Q8IU89 383 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 C1orf131Q8NDD1 294 aaKnown RBP6.82□□□□□ -1.32
HERC4-209ENST00000473533 P2RX5Q93086 422 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 TUBGCP2Q9BSJ2 902 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 NHEJ1Q9H9Q4 299 aaPredicted RBP6.82□□□□□ -1.32
HERC4-209ENST00000473533 ZNF287Q9HBT7 754 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 HNRNPH3P31942 346 aaKnown RBP6.82□□□□□ -1.32
HERC4-209ENST00000473533 MCM7P33993 719 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 GYS2P54840 703 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 TROAPQ12815 778 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 PAK2Q13177 524 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 EIF1ADQ8N9N8 165 aaKnown RBP6.82□□□□□ -1.32
HERC4-209ENST00000473533 CAVIN3Q969G5 261 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 CALML4Q96GE6 196 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 TSG101Q99816 390 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 RAB34Q9BZG1 259 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 SNX12Q9UMY4 172 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 ZNF652Q9Y2D9 606 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 MYH8P13535 1937 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 ZBTB22O15209 634 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 ZEB2O60315 1214 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 ERLIN2O94905 339 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 SYF2O95926 243 aaKnown RBP6.82□□□□□ -1.32
HERC4-209ENST00000473533 NOP2P46087 812 aaKnown RBP6.82□□□□□ -1.32
HERC4-209ENST00000473533 CCDC96Q2M329 555 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 KRT25Q7Z3Z0 450 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 CCDC91Q7Z6B0 441 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 SMYD4Q8IYR2 804 aaPredicted RBP6.82□□□□□ -1.32
HERC4-209ENST00000473533 AENQ8WTP8 325 aaKnown RBP6.82□□□□□ -1.32
HERC4-209ENST00000473533 CEP89Q96ST8 783 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 NOC4LQ9BVI4 516 aaKnown RBP6.82□□□□□ -1.32
HERC4-209ENST00000473533 BLZF1Q9H2G9 400 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 KAT14Q9H8E8 782 aa6.82□□□□□ -1.32
HERC4-209ENST00000473533 MYH13Q9UKX3 1938 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 GRID2IPA4D2P6 1211 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 GOLGA6L10A6NI86 522 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 PHACTR2O75167 634 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 ATP1A1P05023 1023 aaKnown RBP6.81□□□□□ -1.32
HERC4-209ENST00000473533 HERVK_113P62684 666 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 IRX3P78415 501 aaPredicted RBP6.81□□□□□ -1.32
HERC4-209ENST00000473533 SKOR1P84550 965 aa6.81□□□□□ -1.32
HERC4-209ENST00000473533 IFI16Q16666 785 aaKnown RBP6.81□□□□□ -1.32
HERC4-209ENST00000473533 CFAP221Q4G0U5 840 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms