RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 CLEC16AQ2KHT3 1053 aa8.95□□□□□ -0.98
SEC22A-204ENST00000473494 TM4SF20Q53R12 229 aa8.95□□□□□ -0.98
SEC22A-204ENST00000473494 SLC35F1Q5T1Q4 408 aa8.95□□□□□ -0.98
SEC22A-204ENST00000473494 THAP5Q7Z6K1 395 aa8.95□□□□□ -0.98
SEC22A-204ENST00000473494 TSPYL5Q86VY4 417 aaPredicted RBP8.95□□□□□ -0.98
SEC22A-204ENST00000473494 CYP26B1Q9NR63 512 aa8.95□□□□□ -0.98
SEC22A-204ENST00000473494 GPATCH2Q9NW75 528 aa8.95□□□□□ -0.98
SEC22A-204ENST00000473494 WDR64B1ANS9 1081 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 MEIS1O00470 390 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 CPP00450 1065 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 VIL1P09327 827 aaKnown RBP8.94□□□□□ -0.98
SEC22A-204ENST00000473494 SF1Q15637 639 aaKnown RBP8.94□□□□□ -0.98
SEC22A-204ENST00000473494 RSPO4Q2I0M5 234 aaPredicted RBP8.94□□□□□ -0.98
SEC22A-204ENST00000473494 GAB4Q2WGN9 574 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 NKAPLQ5M9Q1 402 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 CWF19L1Q69YN2 538 aaKnown RBP8.94□□□□□ -0.98
SEC22A-204ENST00000473494 NIM1KQ8IY84 436 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 ANKRD13AQ8IZ07 590 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 TMEM151AQ8N4L1 468 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 TMEM145Q8NBT3 493 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 TCTN2Q96GX1 697 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 MCMBPQ9BTE3 642 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 ATG3Q9NT62 314 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 IFT57Q9NWB7 429 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 SFMBT1Q9UHJ3 866 aa8.94□□□□□ -0.98
SEC22A-204ENST00000473494 AURKAO14965 403 aa8.93□□□□□ -0.98
SEC22A-204ENST00000473494 SNRPB2P08579 225 aaKnown RBP8.93□□□□□ -0.98
SEC22A-204ENST00000473494 MASP1P48740 699 aa8.93□□□□□ -0.98
SEC22A-204ENST00000473494 ARHGAP27Q6ZUM4 889 aa8.93□□□□□ -0.98
SEC22A-204ENST00000473494 SLC51AQ86UW1 340 aa8.93□□□□□ -0.98
SEC22A-204ENST00000473494 ZDHHC13Q8IUH4 622 aa8.93□□□□□ -0.98
SEC22A-204ENST00000473494 ZCRB1Q8TBF4 217 aaKnown RBP8.93□□□□□ -0.98
SEC22A-204ENST00000473494 COPS5Q92905 334 aa8.93□□□□□ -0.98
SEC22A-204ENST00000473494 PLAGL2Q9UPG8 496 aa8.93□□□□□ -0.98
SEC22A-204ENST00000473494 STXBP3O00186 592 aa8.92□□□□□ -0.98
SEC22A-204ENST00000473494 VAMP4O75379 141 aa8.92□□□□□ -0.98
SEC22A-204ENST00000473494 ZNF205O95201 554 aa8.92□□□□□ -0.98
SEC22A-204ENST00000473494 RAPGEF3O95398 923 aa8.92□□□□□ -0.98
SEC22A-204ENST00000473494 CD3EP07766 207 aa8.92□□□□□ -0.98
SEC22A-204ENST00000473494 SCRN1Q12765 414 aa8.92□□□□□ -0.98
SEC22A-204ENST00000473494 NTRK3Q16288 839 aa8.92□□□□□ -0.98
SEC22A-204ENST00000473494 GSTCDQ8NEC7 633 aa8.92□□□□□ -0.98
SEC22A-204ENST00000473494 SEMA3GQ9NS98 782 aa8.92□□□□□ -0.98
SEC22A-204ENST00000473494 BACE2Q9Y5Z0 518 aa8.92□□□□□ -0.98
SEC22A-204ENST00000473494 PITPNM2Q9BZ72 1349 aa8.91□□□□□ -0.98
SEC22A-204ENST00000473494 DYRK3O43781 588 aa8.91□□□□□ -0.98
SEC22A-204ENST00000473494 GABREP78334 506 aa8.91□□□□□ -0.98
SEC22A-204ENST00000473494 DOC2BQ14184 412 aa8.91□□□□□ -0.98
SEC22A-204ENST00000473494 TESK1Q15569 626 aa8.91□□□□□ -0.98
SEC22A-204ENST00000473494 IFI16Q16666 785 aaKnown RBP8.91□□□□□ -0.98
SEC22A-204ENST00000473494 DPY19L1Q2PZI1 675 aa8.91□□□□□ -0.98
SEC22A-204ENST00000473494 ACBD5Q5T8D3 534 aaPredicted RBP8.91□□□□□ -0.98
SEC22A-204ENST00000473494 RCSD1Q6JBY9 416 aa8.91□□□□□ -0.98
SEC22A-204ENST00000473494 MAMDC2Q7Z304 686 aaPredicted RBP8.91□□□□□ -0.98
SEC22A-204ENST00000473494 LINC00116Q8NCU8 138 aa8.91□□□□□ -0.98
SEC22A-204ENST00000473494 KREMEN2Q8NCW0 462 aa8.91□□□□□ -0.98
SEC22A-204ENST00000473494 NPLOC4Q8TAT6 608 aa8.91□□□□□ -0.98
SEC22A-204ENST00000473494 TRIM39Q9HCM9 518 aa8.91□□□□□ -0.98
SEC22A-204ENST00000473494 RNF112Q9ULX5 631 aa8.91□□□□□ -0.98
SEC22A-204ENST00000473494 COL4A3BPQ9Y5P4 624 aa8.91□□□□□ -0.98
SEC22A-204ENST00000473494 H3BS24 57 aa8.9□□□□□ -0.98
SEC22A-204ENST00000473494 IRS4O14654 1257 aaPredicted RBP8.9□□□□□ -0.98
SEC22A-204ENST00000473494 IFNGR1P15260 489 aa8.9□□□□□ -0.98
SEC22A-204ENST00000473494 KCNJ6P48051 423 aa8.9□□□□□ -0.98
SEC22A-204ENST00000473494 PRSS53Q2L4Q9 553 aa8.9□□□□□ -0.98
SEC22A-204ENST00000473494 CDKAL1Q5VV42 579 aa8.9□□□□□ -0.98
SEC22A-204ENST00000473494 PLD6Q8N2A8 252 aaKnown RBP8.9□□□□□ -0.98
SEC22A-204ENST00000473494 NETO1Q8TDF5 533 aa8.9□□□□□ -0.98
SEC22A-204ENST00000473494 HSPA12BQ96MM6 686 aa8.9□□□□□ -0.98
SEC22A-204ENST00000473494 CLUHP3Q96NS8 147 aa8.9□□□□□ -0.98
SEC22A-204ENST00000473494 SLC12A9Q9BXP2 914 aa8.9□□□□□ -0.98
SEC22A-204ENST00000473494 SLC52A2Q9HAB3 445 aa8.9□□□□□ -0.98
SEC22A-204ENST00000473494 INTS7Q9NVH2 962 aaKnown RBP8.9□□□□□ -0.98
SEC22A-204ENST00000473494 PIM2Q9P1W9 311 aa8.9□□□□□ -0.98
SEC22A-204ENST00000473494 SNX11Q9Y5W9 270 aa8.9□□□□□ -0.98
SEC22A-204ENST00000473494 PRR19A6NJB7 356 aa8.89□□□□□ -0.99
SEC22A-204ENST00000473494 EFCAB14O75071 495 aa8.89□□□□□ -0.99
SEC22A-204ENST00000473494 THBDP07204 575 aa8.89□□□□□ -0.99
SEC22A-204ENST00000473494 FOSL1P15407 271 aa8.89□□□□□ -0.99
SEC22A-204ENST00000473494 VAV1P15498 845 aa8.89□□□□□ -0.99
SEC22A-204ENST00000473494 TPP2P29144 1249 aaPredicted RBP8.89□□□□□ -0.99
SEC22A-204ENST00000473494 RTP2Q5QGT7 225 aa8.89□□□□□ -0.99
SEC22A-204ENST00000473494 DENND5AQ6IQ26 1287 aa8.89□□□□□ -0.99
SEC22A-204ENST00000473494 KRT26Q7Z3Y9 468 aa8.89□□□□□ -0.99
SEC22A-204ENST00000473494 THNSL2Q86YJ6 484 aa8.89□□□□□ -0.99
SEC22A-204ENST00000473494 PTPRN2Q92932 1015 aa8.89□□□□□ -0.99
SEC22A-204ENST00000473494 FCRL3Q96P31 734 aaPredicted RBP8.89□□□□□ -0.99
SEC22A-204ENST00000473494 SPOCK3Q9BQ16 436 aa8.89□□□□□ -0.99
SEC22A-204ENST00000473494 LRRC4CQ9HCJ2 640 aa8.89□□□□□ -0.99
SEC22A-204ENST00000473494 PCDH12Q9NPG4 1184 aa8.89□□□□□ -0.99
SEC22A-204ENST00000473494 MAGEC2Q9UBF1 373 aaPredicted RBP8.89□□□□□ -0.99
SEC22A-204ENST00000473494 TMEM265A0A087WTH1 108 aa8.88□□□□□ -0.99
SEC22A-204ENST00000473494 A0A087X0B3 334 aa8.88□□□□□ -0.99
SEC22A-204ENST00000473494 PPM1GO15355 546 aaPredicted RBP8.88□□□□□ -0.99
SEC22A-204ENST00000473494 CYP26A1O43174 497 aa8.88□□□□□ -0.99
SEC22A-204ENST00000473494 ENDOUP21128 410 aaKnown RBP8.88□□□□□ -0.99
SEC22A-204ENST00000473494 STAT3P40763 770 aa8.88□□□□□ -0.99
SEC22A-204ENST00000473494 ECI1P42126 302 aa8.88□□□□□ -0.99
SEC22A-204ENST00000473494 NOP2P46087 812 aaKnown RBP8.88□□□□□ -0.99
SEC22A-204ENST00000473494 PCBP3P57721 371 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms