RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 SENP6Q9GZR1 1112 aaPredicted RBP22.81■■□□□ 1.24
COMMD1-208ENST00000472729 DNM1LO00429 736 aa22.8■■□□□ 1.24
COMMD1-208ENST00000472729 PDHBP11177 359 aa22.8■■□□□ 1.24
COMMD1-208ENST00000472729 SNAP25P60880 206 aa22.8■■□□□ 1.24
COMMD1-208ENST00000472729 GPATCH4Q5T3I0 446 aaKnown RBP22.8■■□□□ 1.24
COMMD1-208ENST00000472729 ANO1Q5XXA6 986 aa22.8■■□□□ 1.24
COMMD1-208ENST00000472729 C7orf61Q8IZ16 206 aa22.8■■□□□ 1.24
COMMD1-208ENST00000472729 ZSWIM5Q9P217 1185 aa22.8■■□□□ 1.24
COMMD1-208ENST00000472729 GREB1LQ9C091 1923 aaPredicted RBP22.8■■□□□ 1.24
COMMD1-208ENST00000472729 PFASO15067 1338 aa22.8■■□□□ 1.24
COMMD1-208ENST00000472729 SYNGAP1Q96PV0 1343 aa22.8■■□□□ 1.24
COMMD1-208ENST00000472729 IGHA2P01877 340 aa22.79■■□□□ 1.24
COMMD1-208ENST00000472729 ICAM1P05362 532 aa22.79■■□□□ 1.24
COMMD1-208ENST00000472729 AKR1A1P14550 325 aa22.79■■□□□ 1.24
COMMD1-208ENST00000472729 TTBK2Q6IQ55 1244 aa22.79■■□□□ 1.24
COMMD1-208ENST00000472729 ZNF467Q7Z7K2 595 aaPredicted RBP22.79■■□□□ 1.24
COMMD1-208ENST00000472729 RALYLQ86SE5 291 aaKnown RBP22.79■■□□□ 1.24
COMMD1-208ENST00000472729 PNMA1Q8ND90 353 aa22.79■■□□□ 1.24
COMMD1-208ENST00000472729 ZHX1Q9UKY1 873 aaPredicted RBP22.79■■□□□ 1.24
COMMD1-208ENST00000472729 A0A0G2JMZ2 1700 aa22.79■■□□□ 1.24
COMMD1-208ENST00000472729 PLXNB2O15031 1838 aa22.78■■□□□ 1.24
COMMD1-208ENST00000472729 ERICH2A1L162 156 aa22.78■■□□□ 1.24
COMMD1-208ENST00000472729 ZNF543Q08ER8 600 aa22.78■■□□□ 1.24
COMMD1-208ENST00000472729 GJC2Q5T442 439 aaPredicted RBP22.78■■□□□ 1.24
COMMD1-208ENST00000472729 BTNL9Q6UXG8 535 aa22.78■■□□□ 1.24
COMMD1-208ENST00000472729 CHRDL2Q6WN34 429 aa22.78■■□□□ 1.24
COMMD1-208ENST00000472729 RASGRP2Q7LDG7 609 aa22.78■■□□□ 1.24
COMMD1-208ENST00000472729 XPNPEP3Q9NQH7 507 aa22.78■■□□□ 1.24
COMMD1-208ENST00000472729 FAM184BQ9ULE4 1060 aa22.78■■□□□ 1.24
COMMD1-208ENST00000472729 DNAJC25-GNG10A0A024R161 153 aa22.77■■□□□ 1.24
COMMD1-208ENST00000472729 DHX16O60231 1041 aaKnown RBP22.77■■□□□ 1.24
COMMD1-208ENST00000472729 NEFLP07196 543 aa22.77■■□□□ 1.24
COMMD1-208ENST00000472729 MNX1P50219 401 aaPredicted RBP22.77■■□□□ 1.24
COMMD1-208ENST00000472729 IFIT1BQ5T764 474 aaKnown RBP22.77■■□□□ 1.24
COMMD1-208ENST00000472729 NSMFQ6X4W1 530 aa22.77■■□□□ 1.24
COMMD1-208ENST00000472729 RNF180Q86T96 592 aa22.77■■□□□ 1.24
COMMD1-208ENST00000472729 RANBP17Q9H2T7 1088 aaKnown RBP22.77■■□□□ 1.24
COMMD1-208ENST00000472729 COLQQ9Y215 455 aaPredicted RBP22.77■■□□□ 1.24
COMMD1-208ENST00000472729 ZNF536O15090 1300 aa22.77■■□□□ 1.24
COMMD1-208ENST00000472729 TNKSO95271 1327 aa22.77■■□□□ 1.24
COMMD1-208ENST00000472729 ASB14A6NK59 587 aa22.76■■□□□ 1.23
COMMD1-208ENST00000472729 SGSM2O43147 1006 aa22.76■■□□□ 1.23
COMMD1-208ENST00000472729 SART3Q15020 963 aaKnown RBP22.76■■□□□ 1.23
COMMD1-208ENST00000472729 HABP4Q5JVS0 413 aaKnown RBP22.76■■□□□ 1.23
COMMD1-208ENST00000472729 CASC1Q6TDU7 716 aa22.76■■□□□ 1.23
COMMD1-208ENST00000472729 MAMDC4Q6UXC1 1216 aa22.76■■□□□ 1.23
COMMD1-208ENST00000472729 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.76■■□□□ 1.23
COMMD1-208ENST00000472729 ABHD16BQ9H3Z7 469 aa22.76■■□□□ 1.23
COMMD1-208ENST00000472729 SPC25Q9HBM1 224 aa22.76■■□□□ 1.23
COMMD1-208ENST00000472729 RLFQ13129 1914 aa22.75■■□□□ 1.23
COMMD1-208ENST00000472729 GOLGA8HP0CJ92 632 aa22.75■■□□□ 1.23
COMMD1-208ENST00000472729 COL6A1P12109 1028 aa22.75■■□□□ 1.23
COMMD1-208ENST00000472729 CCDC136Q96JN2 1154 aa22.75■■□□□ 1.23
COMMD1-208ENST00000472729 IL25Q9H293 177 aa22.75■■□□□ 1.23
COMMD1-208ENST00000472729 A1CFQ9NQ94 594 aaKnown RBP22.75■■□□□ 1.23
COMMD1-208ENST00000472729 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.75■■□□□ 1.23
COMMD1-208ENST00000472729 PRKAG2Q9UGJ0 569 aa22.75■■□□□ 1.23
COMMD1-208ENST00000472729 ZNF236Q9UL36 1845 aa22.74■■□□□ 1.23
COMMD1-208ENST00000472729 PARP1P09874 1014 aaKnown RBP22.74■■□□□ 1.23
COMMD1-208ENST00000472729 ATN1P54259 1190 aaPredicted RBP22.74■■□□□ 1.23
COMMD1-208ENST00000472729 ACVR2BQ13705 512 aa22.74■■□□□ 1.23
COMMD1-208ENST00000472729 NOL8Q76FK4 1167 aaKnown RBP22.74■■□□□ 1.23
COMMD1-208ENST00000472729 ENAHQ8N8S7 591 aaPredicted RBP22.74■■□□□ 1.23
COMMD1-208ENST00000472729 ANKS1AQ92625 1134 aa22.74■■□□□ 1.23
COMMD1-208ENST00000472729 MPHOSPH6Q99547 160 aaKnown RBP22.74■■□□□ 1.23
COMMD1-208ENST00000472729 ZMYND8Q9ULU4 1186 aaPredicted RBP22.74■■□□□ 1.23
COMMD1-208ENST00000472729 PTPDC1A2A3K4 754 aa22.73■■□□□ 1.23
COMMD1-208ENST00000472729 ZNF865P0CJ78 1059 aaPredicted RBP22.73■■□□□ 1.23
COMMD1-208ENST00000472729 SNHG28P0DPA3 235 aa22.73■■□□□ 1.23
COMMD1-208ENST00000472729 TAL1P17542 331 aaPredicted RBP22.73■■□□□ 1.23
COMMD1-208ENST00000472729 CNTN2Q02246 1040 aa22.73■■□□□ 1.23
COMMD1-208ENST00000472729 PTH1RQ03431 593 aa22.73■■□□□ 1.23
COMMD1-208ENST00000472729 ASPRV1Q53RT3 343 aa22.73■■□□□ 1.23
COMMD1-208ENST00000472729 ARMCX2Q7L311 632 aa22.73■■□□□ 1.23
COMMD1-208ENST00000472729 NCOA7Q8NI08 942 aa22.73■■□□□ 1.23
COMMD1-208ENST00000472729 ADD3Q9UEY8 706 aaKnown RBP22.73■■□□□ 1.23
COMMD1-208ENST00000472729 SNAI1O95863 264 aaPredicted RBP22.72■■□□□ 1.23
COMMD1-208ENST00000472729 CYP21A2P08686 494 aa22.72■■□□□ 1.23
COMMD1-208ENST00000472729 LRRC41Q15345 812 aa22.72■■□□□ 1.23
COMMD1-208ENST00000472729 MUM1L1Q5H9M0 696 aa22.72■■□□□ 1.23
COMMD1-208ENST00000472729 CCDC144CPQ8IYA2 1237 aa22.72■■□□□ 1.23
COMMD1-208ENST00000472729 UBA5Q9GZZ9 404 aa22.72■■□□□ 1.23
COMMD1-208ENST00000472729 CYP39A1Q9NYL5 469 aa22.72■■□□□ 1.23
COMMD1-208ENST00000472729 IFIT3O14879 490 aaKnown RBP22.71■■□□□ 1.23
COMMD1-208ENST00000472729 PGK1P00558 417 aa22.71■■□□□ 1.23
COMMD1-208ENST00000472729 ADCYAP1R1P41586 468 aa22.71■■□□□ 1.23
COMMD1-208ENST00000472729 LRRC26Q2I0M4 334 aa22.71■■□□□ 1.23
COMMD1-208ENST00000472729 FAM133AQ8N9E0 248 aa22.71■■□□□ 1.23
COMMD1-208ENST00000472729 MYH4Q9Y623 1939 aa22.7■■□□□ 1.23
COMMD1-208ENST00000472729 SYN1P17600 705 aa22.7■■□□□ 1.22
COMMD1-208ENST00000472729 BMP2KLQ5H9B9 411 aa22.7■■□□□ 1.22
COMMD1-208ENST00000472729 MAP4K1Q92918 833 aa22.7■■□□□ 1.22
COMMD1-208ENST00000472729 FERMT2Q96AC1 680 aa22.7■■□□□ 1.22
COMMD1-208ENST00000472729 VAT1LQ9HCJ6 419 aa22.7■■□□□ 1.22
COMMD1-208ENST00000472729 WDR19Q8NEZ3 1342 aa22.69■■□□□ 1.22
COMMD1-208ENST00000472729 B4DLN1 442 aa22.69■■□□□ 1.22
COMMD1-208ENST00000472729 E7EWF7 191 aa22.69■■□□□ 1.22
COMMD1-208ENST00000472729 DUSP11O75319 330 aaKnown RBP22.69■■□□□ 1.22
COMMD1-208ENST00000472729 CALML3P27482 149 aa22.69■■□□□ 1.22
COMMD1-208ENST00000472729 MRPL12P52815 198 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms