RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.75■□□□□ 0.27
SMURF1-203ENST00000472627 NKX3-2P78367 333 aa16.74■□□□□ 0.27
SMURF1-203ENST00000472627 TNFAIP2Q03169 654 aa16.74■□□□□ 0.27
SMURF1-203ENST00000472627 ITGA7Q13683 1181 aa16.74■□□□□ 0.27
SMURF1-203ENST00000472627 C12orf60Q5U649 245 aa16.74■□□□□ 0.27
SMURF1-203ENST00000472627 ZKSCAN2Q63HK3 967 aa16.74■□□□□ 0.27
SMURF1-203ENST00000472627 C16orf86Q6ZW13 317 aa16.74■□□□□ 0.27
SMURF1-203ENST00000472627 CPXCR1Q8N123 301 aa16.74■□□□□ 0.27
SMURF1-203ENST00000472627 TMEM57Q8N5G2 664 aa16.74■□□□□ 0.27
SMURF1-203ENST00000472627 CHST13Q8NET6 341 aa16.74■□□□□ 0.27
SMURF1-203ENST00000472627 HLA-CQ95604 372 aa16.74■□□□□ 0.27
SMURF1-203ENST00000472627 NOC4LQ9BVI4 516 aaKnown RBP16.74■□□□□ 0.27
SMURF1-203ENST00000472627 EPHX3Q9H6B9 360 aa16.74■□□□□ 0.27
SMURF1-203ENST00000472627 ARMT1Q9H993 441 aa16.74■□□□□ 0.27
SMURF1-203ENST00000472627 TCF20Q9UGU0 1960 aaKnown RBP16.74■□□□□ 0.27
SMURF1-203ENST00000472627 GOLIM4O00461 696 aa16.73■□□□□ 0.27
SMURF1-203ENST00000472627 GPR37L1O60883 481 aa16.73■□□□□ 0.27
SMURF1-203ENST00000472627 MBD4O95243 580 aa16.73■□□□□ 0.27
SMURF1-203ENST00000472627 FSCN1Q16658 493 aaKnown RBP16.73■□□□□ 0.27
SMURF1-203ENST00000472627 CXCL17Q6UXB2 119 aa16.73■□□□□ 0.27
SMURF1-203ENST00000472627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.73■□□□□ 0.27
SMURF1-203ENST00000472627 FTSJ3Q8IY81 847 aaKnown RBP16.73■□□□□ 0.27
SMURF1-203ENST00000472627 SLC43A3Q8NBI5 491 aa16.73■□□□□ 0.27
SMURF1-203ENST00000472627 DNAJC2Q99543 621 aaKnown RBP16.73■□□□□ 0.27
SMURF1-203ENST00000472627 MTCH2Q9Y6C9 303 aa16.73■□□□□ 0.27
SMURF1-203ENST00000472627 KIF28PB7ZC32 967 aa16.72■□□□□ 0.27
SMURF1-203ENST00000472627 SUPT20HL2P0C7V6 817 aa16.72■□□□□ 0.27
SMURF1-203ENST00000472627 OAZ1P54368 228 aa16.72■□□□□ 0.27
SMURF1-203ENST00000472627 BEX3Q00994 111 aa16.72■□□□□ 0.27
SMURF1-203ENST00000472627 TLK2Q86UE8 772 aa16.72■□□□□ 0.27
SMURF1-203ENST00000472627 CCDC144CPQ8IYA2 1237 aa16.72■□□□□ 0.27
SMURF1-203ENST00000472627 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMURF1-203ENST00000472627 SLC9A7Q96T83 725 aa16.72■□□□□ 0.27
SMURF1-203ENST00000472627 C1orf115Q9H7X2 142 aa16.72■□□□□ 0.27
SMURF1-203ENST00000472627 RIPK3Q9Y572 518 aa16.72■□□□□ 0.27
SMURF1-203ENST00000472627 GBF1Q92538 1859 aa16.71■□□□□ 0.27
SMURF1-203ENST00000472627 TCRBV5S4A2TA0A5A2 114 aa16.71■□□□□ 0.27
SMURF1-203ENST00000472627 ASB14A6NK59 587 aa16.71■□□□□ 0.27
SMURF1-203ENST00000472627 USP17L12C9JPN9 530 aa16.71■□□□□ 0.27
SMURF1-203ENST00000472627 USP17L21D6R901 530 aa16.71■□□□□ 0.27
SMURF1-203ENST00000472627 ADCY6O43306 1168 aa16.71■□□□□ 0.27
SMURF1-203ENST00000472627 CA3P07451 260 aa16.71■□□□□ 0.27
SMURF1-203ENST00000472627 MYOGP15173 224 aa16.71■□□□□ 0.27
SMURF1-203ENST00000472627 IRX5P78411 483 aaPredicted RBP16.71■□□□□ 0.27
SMURF1-203ENST00000472627 KIFC2Q96AC6 838 aa16.71■□□□□ 0.27
SMURF1-203ENST00000472627 ARPP21Q9UBL0 812 aaPredicted RBP16.71■□□□□ 0.27
SMURF1-203ENST00000472627 UMODL1Q5DID0 1318 aa16.7■□□□□ 0.26
SMURF1-203ENST00000472627 F5H6K3 240 aa16.7■□□□□ 0.26
SMURF1-203ENST00000472627 B4GALT4O60513 344 aa16.7■□□□□ 0.26
SMURF1-203ENST00000472627 FDX1P10109 184 aa16.7■□□□□ 0.26
SMURF1-203ENST00000472627 KLRC3Q07444 240 aa16.7■□□□□ 0.26
SMURF1-203ENST00000472627 CLASRPQ8N2M8 674 aaKnown RBP16.7■□□□□ 0.26
SMURF1-203ENST00000472627 PHOSPHO2Q8TCD6 241 aa16.7■□□□□ 0.26
SMURF1-203ENST00000472627 NUP88Q99567 741 aaPredicted RBP16.7■□□□□ 0.26
SMURF1-203ENST00000472627 TRPV6Q9H1D0 765 aa16.7■□□□□ 0.26
SMURF1-203ENST00000472627 WNT8AQ9H1J5 351 aa16.7■□□□□ 0.26
SMURF1-203ENST00000472627 SLC38A10Q9HBR0 1119 aa16.7■□□□□ 0.26
SMURF1-203ENST00000472627 FEM1BQ9UK73 627 aa16.7■□□□□ 0.26
SMURF1-203ENST00000472627 XIRP2A4UGR9 3374 aa16.7■□□□□ 0.26
SMURF1-203ENST00000472627 CTAGE5O15320 804 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 PRKAB2O43741 272 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 TLL1O43897 1013 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 NDUFB10O96000 172 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 IFIT2P09913 472 aaKnown RBP16.69■□□□□ 0.26
SMURF1-203ENST00000472627 RFC2P35250 354 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 ITPRIPQ8IWB1 547 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 ARNTL2Q8WYA1 636 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 ACAD9Q9H845 621 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 MKNK2Q9HBH9 465 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 RAVER2Q9HCJ3 691 aaKnown RBP16.69■□□□□ 0.26
SMURF1-203ENST00000472627 NYAP2Q9P242 653 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 TNNQ9UQP3 1299 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 EXOC6BQ9Y2D4 811 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 Q9Y3F1 56 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 SLC4A4Q9Y6R1 1079 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 PIEZO1Q92508 2521 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 CHD7Q9P2D1 2997 aa16.69■□□□□ 0.26
SMURF1-203ENST00000472627 CYP2D7A0A087X1C5 515 aa16.68■□□□□ 0.26
SMURF1-203ENST00000472627 DYNC1LI2O43237 492 aaPredicted RBP16.68■□□□□ 0.26
SMURF1-203ENST00000472627 ADD2P35612 726 aa16.68■□□□□ 0.26
SMURF1-203ENST00000472627 SCLYQ96I15 445 aa16.68■□□□□ 0.26
SMURF1-203ENST00000472627 CERS4Q9HA82 394 aa16.68■□□□□ 0.26
SMURF1-203ENST00000472627 ZNF287Q9HBT7 754 aa16.68■□□□□ 0.26
SMURF1-203ENST00000472627 HOMER2Q9NSB8 354 aa16.68■□□□□ 0.26
SMURF1-203ENST00000472627 COG6Q9Y2V7 657 aa16.68■□□□□ 0.26
SMURF1-203ENST00000472627 LRRC37A2A6NM11 1700 aa16.67■□□□□ 0.26
SMURF1-203ENST00000472627 IQSEC1Q6DN90 963 aa16.67■□□□□ 0.26
SMURF1-203ENST00000472627 ZSCAN25Q6NSZ9 544 aa16.67■□□□□ 0.26
SMURF1-203ENST00000472627 KATNBL1Q9H079 304 aa16.67■□□□□ 0.26
SMURF1-203ENST00000472627 ALDH8A1Q9H2A2 487 aaPredicted RBP16.67■□□□□ 0.26
SMURF1-203ENST00000472627 IL1RAPL2Q9NP60 686 aa16.67■□□□□ 0.26
SMURF1-203ENST00000472627 PAG1Q9NWQ8 432 aa16.67■□□□□ 0.26
SMURF1-203ENST00000472627 ISY1Q9ULR0 285 aaKnown RBP16.67■□□□□ 0.26
SMURF1-203ENST00000472627 SYNPO2Q9UMS6 1093 aa16.67■□□□□ 0.26
SMURF1-203ENST00000472627 GNEQ9Y223 722 aaKnown RBP16.67■□□□□ 0.26
SMURF1-203ENST00000472627 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.66■□□□□ 0.26
SMURF1-203ENST00000472627 RFXAPO00287 272 aa16.66■□□□□ 0.26
SMURF1-203ENST00000472627 TTLL4Q14679 1199 aa16.66■□□□□ 0.26
SMURF1-203ENST00000472627 BRDTQ58F21 947 aaPredicted RBP16.66■□□□□ 0.26
SMURF1-203ENST00000472627 DEFB128Q7Z7B8 93 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms