RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 CCDC93Q567U6 631 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 RPS26P11Q5JNZ5 115 aaPredicted RBP4.63□□□□□ -1.67
XRN1-209ENST00000472625 RNF43Q68DV7 783 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 ANKRD34AQ69YU3 496 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 LDHDQ86WU2 507 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 NBPF5PQ86XG9 351 aaPredicted RBP4.63□□□□□ -1.67
XRN1-209ENST00000472625 RTKN2Q8IZC4 609 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 ZNF622Q969S3 477 aaKnown RBP eCLIP4.63□□□□□ -1.678e-8■■□□□ 14.3
XRN1-209ENST00000472625 WDR89Q96FK6 387 aaPredicted RBP4.63□□□□□ -1.67
XRN1-209ENST00000472625 MASTLQ96GX5 879 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 MFSD14AQ96MC6 490 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 PCGF6Q9BYE7 350 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 NYXQ9GZU5 481 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 TMX4Q9H1E5 349 aaPredicted RBP4.63□□□□□ -1.67
XRN1-209ENST00000472625 SUGCTQ9HAC7 445 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 GOLGA2P5Q9HBQ8 144 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 CEMIPQ8WUJ3 1361 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 DLEC1Q9Y238 1755 aa4.63□□□□□ -1.67
XRN1-209ENST00000472625 PRR19A6NJB7 356 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 WDR64B1ANS9 1081 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 U2SURPO15042 1029 aaKnown RBP4.62□□□□□ -1.67
XRN1-209ENST00000472625 GSC2O15499 205 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 HTATSF1O43719 755 aaKnown RBP4.62□□□□□ -1.67
XRN1-209ENST00000472625 HMOX1P09601 288 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 SNRPA1P09661 255 aaKnown RBP4.62□□□□□ -1.67
XRN1-209ENST00000472625 HSPA1AP0DMV8 641 aaKnown RBP4.62□□□□□ -1.67
XRN1-209ENST00000472625 HSPA1BP0DMV9 641 aaKnown RBP4.62□□□□□ -1.67
XRN1-209ENST00000472625 NPR1P16066 1061 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 ALDH1B1P30837 517 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 HOXA10P31260 410 aaPredicted RBP4.62□□□□□ -1.67
XRN1-209ENST00000472625 MAPK8P45983 427 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 ARL4DP49703 201 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 FCGRTP55899 365 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 PRR5LQ6MZQ0 368 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 TPTE2Q6XPS3 522 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 FBXL6Q8N531 539 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 C12orf50Q8NA57 414 aaPredicted RBP4.62□□□□□ -1.67
XRN1-209ENST00000472625 SMG8Q8ND04 991 aaKnown RBP4.62□□□□□ -1.67
XRN1-209ENST00000472625 FBF1Q8TES7 1133 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 PNISRQ8TF01 805 aaKnown RBP4.62□□□□□ -1.67
XRN1-209ENST00000472625 FAM83CQ9BQN1 747 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 DBNDD2Q9BQY9 259 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 PNNQ9H307 717 aaKnown RBP4.62□□□□□ -1.67
XRN1-209ENST00000472625 GSX1Q9H4S2 264 aaPredicted RBP4.62□□□□□ -1.67
XRN1-209ENST00000472625 TIAM2Q8IVF5 1701 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 KIF7Q2M1P5 1343 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 UBR2Q8IWV8 1755 aa4.62□□□□□ -1.67
XRN1-209ENST00000472625 IBTKQ9P2D0 1353 aaPredicted RBP4.62□□□□□ -1.67
XRN1-209ENST00000472625 KIAA1324LA8MWY0 1029 aaPredicted RBP4.61□□□□□ -1.67
XRN1-209ENST00000472625 PATL2C9JE40 543 aaKnown RBP4.61□□□□□ -1.67
XRN1-209ENST00000472625 ENC1O14682 589 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 ZNF862O60290 1169 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 COBLO75128 1261 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 GADD45BO75293 160 aaPredicted RBP4.61□□□□□ -1.67
XRN1-209ENST00000472625 PAGE1O75459 146 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 SRGNP10124 158 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 MAOBP27338 520 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 MAP4P27816 1152 aaKnown RBP4.61□□□□□ -1.67
XRN1-209ENST00000472625 CTCFP49711 727 aaPredicted RBP4.61□□□□□ -1.67
XRN1-209ENST00000472625 ZNF157P51786 506 aaPredicted RBP4.61□□□□□ -1.67
XRN1-209ENST00000472625 SLC39A6Q13433 755 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 COL19A1Q14993 1142 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 TBC1D9BQ66K14 1250 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 CLEC10AQ8IUN9 316 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 C2CD4AQ8NCU7 369 aaPredicted RBP4.61□□□□□ -1.67
XRN1-209ENST00000472625 JDP2Q8WYK2 163 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 ZNF496Q96IT1 587 aaPredicted RBP4.61□□□□□ -1.67
XRN1-209ENST00000472625 NECAB3Q96P71 396 aaPredicted RBP4.61□□□□□ -1.67
XRN1-209ENST00000472625 LGR6Q9HBX8 967 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 PRDM10Q9NQV6 1147 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 HACL1Q9UJ83 578 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 OAS3Q9Y6K5 1087 aaKnown RBP4.61□□□□□ -1.67
XRN1-209ENST00000472625 RNF123Q5XPI4 1314 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 CNTNAP1P78357 1384 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 RIC1Q4ADV7 1423 aa4.61□□□□□ -1.67
XRN1-209ENST00000472625 COL3A1P02461 1466 aaPredicted RBP4.61□□□□□ -1.67
XRN1-209ENST00000472625 MYH14Q7Z406 1995 aaKnown RBP4.6□□□□□ -1.67
XRN1-209ENST00000472625 CAMTA2O94983 1202 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 CTSHP09668 335 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 BMP6P22004 513 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 ECE1P42892 770 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 MAP2K1Q02750 393 aaPredicted RBP4.6□□□□□ -1.67
XRN1-209ENST00000472625 ZNF252P-AS1Q0IIN9 211 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 EXOSC6Q5RKV6 272 aaKnown RBP4.6□□□□□ -1.67
XRN1-209ENST00000472625 CC2D1BQ5T0F9 858 aaKnown RBP4.6□□□□□ -1.67
XRN1-209ENST00000472625 MCTP1Q6DN14 999 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 CDPF1Q6NVV7 123 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 KIF6Q6ZMV9 814 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 ZSCAN29Q8IWY8 852 aaPredicted RBP4.6□□□□□ -1.67
XRN1-209ENST00000472625 GPC2Q8N158 579 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 FBLIM1Q8WUP2 373 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 RPGRQ92834 1020 aaKnown RBP4.6□□□□□ -1.67
XRN1-209ENST00000472625 GATA6Q92908 595 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 PSMD1Q99460 953 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 WDR18Q9BV38 432 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 VPS33BQ9H267 617 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 NIP7Q9Y221 180 aaKnown RBP eCLIP4.6□□□□□ -1.67
XRN1-209ENST00000472625 CDHR2Q9BYE9 1310 aa4.6□□□□□ -1.67
XRN1-209ENST00000472625 KLRG2A4D1S0 409 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms