RNA–Protein interactions for RNA: ENST00000472518.1

RTKN-207, Transcript of rhotekin, humanhuman

TSL 1 (best)

Gene RTKN, Length 1,105 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-207ENST00000472518 NUP133Q8WUM0 1156 aa16.55■□□□□ 0.24
RTKN-207ENST00000472518 SPC25Q9HBM1 224 aa16.55■□□□□ 0.24
RTKN-207ENST00000472518 RAVER2Q9HCJ3 691 aaKnown RBP16.55■□□□□ 0.24
RTKN-207ENST00000472518 RIPK3Q9Y572 518 aa16.55■□□□□ 0.24
RTKN-207ENST00000472518 FOXP2O15409 715 aa16.54■□□□□ 0.24
RTKN-207ENST00000472518 DUSP11O75319 330 aaKnown RBP16.54■□□□□ 0.24
RTKN-207ENST00000472518 MYCNP04198 464 aaPredicted RBP16.54■□□□□ 0.24
RTKN-207ENST00000472518 CST5P28325 142 aaPredicted RBP16.54■□□□□ 0.24
RTKN-207ENST00000472518 MDM2Q00987 491 aaPredicted RBP16.54■□□□□ 0.24
RTKN-207ENST00000472518 ANO1Q5XXA6 986 aa16.54■□□□□ 0.24
RTKN-207ENST00000472518 DCAF4Q8WV16 495 aa16.54■□□□□ 0.24
RTKN-207ENST00000472518 TCP11L1Q9NUJ3 509 aa16.54■□□□□ 0.24
RTKN-207ENST00000472518 ISY1Q9ULR0 285 aaKnown RBP16.54■□□□□ 0.24
RTKN-207ENST00000472518 TACC3Q9Y6A5 838 aa16.54■□□□□ 0.24
RTKN-207ENST00000472518 MROH7Q68CQ1 1323 aa16.53■□□□□ 0.24
RTKN-207ENST00000472518 ASB14A6NK59 587 aa16.53■□□□□ 0.24
RTKN-207ENST00000472518 RANBP6O60518 1105 aaKnown RBP16.53■□□□□ 0.24
RTKN-207ENST00000472518 ADAMTS4O75173 837 aa16.53■□□□□ 0.24
RTKN-207ENST00000472518 ACVR2BQ13705 512 aa16.53■□□□□ 0.24
RTKN-207ENST00000472518 CCDC129Q6ZRS4 1044 aa16.53■□□□□ 0.24
RTKN-207ENST00000472518 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.53■□□□□ 0.24
RTKN-207ENST00000472518 PCSK9Q8NBP7 692 aaKnown RBP16.53■□□□□ 0.24
RTKN-207ENST00000472518 TOX2Q96NM4 488 aa16.53■□□□□ 0.24
RTKN-207ENST00000472518 OSBPL3Q9H4L5 887 aa16.53■□□□□ 0.24
RTKN-207ENST00000472518 RNF41Q9H4P4 317 aaPredicted RBP16.53■□□□□ 0.24
RTKN-207ENST00000472518 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.53■□□□□ 0.24
RTKN-207ENST00000472518 ZHX1Q9UKY1 873 aaPredicted RBP16.53■□□□□ 0.24
RTKN-207ENST00000472518 CHD9Q3L8U1 2897 aa16.52■□□□□ 0.24
RTKN-207ENST00000472518 CCDC171Q6TFL3 1326 aa16.52■□□□□ 0.24
RTKN-207ENST00000472518 LOC102724159A0A0B4J2E5 919 aa16.52■□□□□ 0.24
RTKN-207ENST00000472518 POTEB2H3BUK9 544 aa16.52■□□□□ 0.24
RTKN-207ENST00000472518 HIP1O00291 1037 aa16.52■□□□□ 0.24
RTKN-207ENST00000472518 SNAI1O95863 264 aaPredicted RBP16.52■□□□□ 0.24
RTKN-207ENST00000472518 FGAP02671 866 aa16.52■□□□□ 0.24
RTKN-207ENST00000472518 TOP1P11387 765 aaKnown RBP16.52■□□□□ 0.24
RTKN-207ENST00000472518 MCCP23508 829 aa16.52■□□□□ 0.24
RTKN-207ENST00000472518 CTDSPL2Q05D32 466 aa16.52■□□□□ 0.24
RTKN-207ENST00000472518 PWP2Q15269 919 aaKnown RBP16.52■□□□□ 0.24
RTKN-207ENST00000472518 TRIM60Q495X7 471 aa16.52■□□□□ 0.24
RTKN-207ENST00000472518 FAM109BQ6ICB4 259 aaPredicted RBP16.52■□□□□ 0.24
RTKN-207ENST00000472518 FAM161BQ96MY7 647 aa16.52■□□□□ 0.24
RTKN-207ENST00000472518 PDLIM7Q9NR12 457 aa16.52■□□□□ 0.24
RTKN-207ENST00000472518 RNF146Q9NTX7 359 aa16.52■□□□□ 0.24
RTKN-207ENST00000472518 ELP1O95163 1332 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 SYNRGQ9UMZ2 1314 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 A0A1W2PQ45 241 aaPredicted RBP16.51■□□□□ 0.23
RTKN-207ENST00000472518 A0A1W2PQY0 241 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 TRIM6-TRIM34B2RNG4 842 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 PGK1P00558 417 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 CLTBP09497 229 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 HSPD1P10809 573 aaKnown RBP16.51■□□□□ 0.23
RTKN-207ENST00000472518 TAL1P17542 331 aaPredicted RBP16.51■□□□□ 0.23
RTKN-207ENST00000472518 SLC4A3P48751 1232 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 VPS53Q5VIR6 699 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 ARMCX2Q7L311 632 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 FAM133AQ8N9E0 248 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 KLHDC9Q8NEP7 349 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 TTC14Q96N46 770 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 LNPKQ9C0E8 428 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 PRDM5Q9NQX1 630 aaPredicted RBP16.51■□□□□ 0.23
RTKN-207ENST00000472518 STARD7Q9NQZ5 370 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 IL17RBQ9NRM6 502 aa16.51■□□□□ 0.23
RTKN-207ENST00000472518 ZNF536O15090 1300 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 A0A0D9SFI3 127 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 ACLYP53396 1101 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 NKX3-2P78367 333 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 TLE2Q04725 743 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 CCDC178Q5BJE1 867 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 BTNL9Q6UXG8 535 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 ANKRD33Q7Z3H0 272 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 FERMT2Q96AC1 680 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 GLT1D1Q96MS3 346 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 TRERF1Q96PN7 1200 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 SEZ6LQ9BYH1 1024 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 UPF3AQ9H1J1 476 aaKnown RBP16.5■□□□□ 0.23
RTKN-207ENST00000472518 A1CFQ9NQ94 594 aaKnown RBP16.5■□□□□ 0.23
RTKN-207ENST00000472518 TOMM22Q9NS69 142 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 PRR12Q9ULL5 1215 aa16.5■□□□□ 0.23
RTKN-207ENST00000472518 LAMA4Q16363 1823 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 DCDC2CA8MYV0 355 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 KIAA0355O15063 1070 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 ICAM1P05362 532 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 GJA9P57773 515 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 NMIQ13287 307 aaPredicted RBP16.49■□□□□ 0.23
RTKN-207ENST00000472518 CCDC96Q2M329 555 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 MFSD6Q6ZSS7 791 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 KCTD1Q719H9 257 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 CHD1LQ86WJ1 897 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 RILPL2Q969X0 211 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 FAM227BQ96M60 508 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 FGD4Q96M96 766 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 MAF1Q9H063 256 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 RANBP17Q9H2T7 1088 aaKnown RBP16.49■□□□□ 0.23
RTKN-207ENST00000472518 HOMER2Q9NSB8 354 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 BDP1A6H8Y1 2624 aa16.49■□□□□ 0.23
RTKN-207ENST00000472518 ALAS1P13196 640 aa16.48■□□□□ 0.23
RTKN-207ENST00000472518 NUCB1Q02818 461 aa16.48■□□□□ 0.23
RTKN-207ENST00000472518 CCDC144BQ3MJ40 725 aa16.48■□□□□ 0.23
RTKN-207ENST00000472518 CCSAPQ6IQ19 270 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms