RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 OTOFQ9HC10 1997 aa12.17□□□□□ -0.46
UBE2F-220ENST00000472479 PNMA6FA0A0J9YX94 578 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 H3BQV1 296 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 ZBTB5O15062 677 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 PRPF3O43395 683 aaKnown RBP12.16□□□□□ -0.46
UBE2F-220ENST00000472479 JAK2O60674 1132 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 DEXIO95424 95 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 ALDH1A1P00352 501 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 GJB2P29033 226 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 MAP2K2P36507 400 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 HERVK_113P62684 666 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 USH1GQ495M9 461 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 IFFO2Q5TF58 517 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 WDR78Q5VTH9 848 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 IFNL1Q8IU54 200 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 NSUN7Q8NE18 718 aaKnown RBP12.16□□□□□ -0.46
UBE2F-220ENST00000472479 ALG1Q9BT22 464 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 RNF26Q9BY78 433 aaPredicted RBP12.16□□□□□ -0.46
UBE2F-220ENST00000472479 RAVER2Q9HCJ3 691 aaKnown RBP12.16□□□□□ -0.46
UBE2F-220ENST00000472479 SSUH2Q9Y2M2 353 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 SLC45A1Q9Y2W3 748 aa12.16□□□□□ -0.46
UBE2F-220ENST00000472479 GREB1LQ9C091 1923 aaPredicted RBP12.16□□□□□ -0.46
UBE2F-220ENST00000472479 TESPA1A2RU30 521 aaPredicted RBP12.15□□□□□ -0.46
UBE2F-220ENST00000472479 VWA5AO00534 786 aa12.15□□□□□ -0.46
UBE2F-220ENST00000472479 CYTH3O43739 400 aa12.15□□□□□ -0.46
UBE2F-220ENST00000472479 TM4SF4P48230 202 aa12.15□□□□□ -0.46
UBE2F-220ENST00000472479 CUL4AQ13619 759 aa12.15□□□□□ -0.46
UBE2F-220ENST00000472479 GNL2Q13823 731 aaKnown RBP12.15□□□□□ -0.46
UBE2F-220ENST00000472479 NTRK3Q16288 839 aa12.15□□□□□ -0.46
UBE2F-220ENST00000472479 QRICH1Q2TAL8 776 aa12.15□□□□□ -0.46
UBE2F-220ENST00000472479 MB21D1Q8N884 522 aa12.15□□□□□ -0.46
UBE2F-220ENST00000472479 GTF3C2Q8WUA4 911 aaPredicted RBP12.15□□□□□ -0.46
UBE2F-220ENST00000472479 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
UBE2F-220ENST00000472479 ZIC5Q96T25 663 aa12.15□□□□□ -0.46
UBE2F-220ENST00000472479 PTPN18Q99952 460 aa12.15□□□□□ -0.46
UBE2F-220ENST00000472479 AMNQ9BXJ7 453 aa12.15□□□□□ -0.46
UBE2F-220ENST00000472479 PNMA2Q9UL42 364 aa12.15□□□□□ -0.46
UBE2F-220ENST00000472479 CCPG1Q9ULG6 757 aa12.15□□□□□ -0.46
UBE2F-220ENST00000472479 SPDYE16A6NNV3 312 aaPredicted RBP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 IGF2BP3O00425 579 aaKnown RBP eCLIP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 CTDNEP1O95476 244 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 ALAS1P13196 640 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 SCG2P13521 617 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 GCLCP48506 637 aaPredicted RBP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 NAPAP54920 295 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 NLRP5P59047 1200 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 MOGSQ13724 837 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 LARP1BQ659C4 914 aaKnown RBP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 CCDC12Q8WUD4 166 aaPredicted RBP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 COA7Q96BR5 231 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 IPO9Q96P70 1041 aaKnown RBP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 HOMER2Q9NSB8 354 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 PCDHA1Q9Y5I3 950 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 MYPNQ86TC9 1320 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 CNTNAP5Q8WYK1 1306 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 NID2Q14112 1375 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 ECM2O94769 699 aaPredicted RBP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 PDCP20941 246 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 STAT3P40763 770 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 CCNA1P78396 465 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 ST3GAL1Q11201 340 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 SAFBQ15424 915 aaKnown RBP eCLIP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 PFKFB3Q16875 520 aaPredicted RBP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 SNRNP48Q6IEG0 339 aaKnown RBP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 NCAPG2Q86XI2 1143 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 ANKRD13CQ8N6S4 541 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 GPRC5AQ8NFJ5 357 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 GPKOWQ92917 476 aaPredicted RBP eCLIP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 C8orf76Q96K31 380 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 RANBP17Q9H2T7 1088 aaKnown RBP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 SLC38A10Q9HBR0 1119 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 ZCCHC17Q9NP64 241 aaKnown RBP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 CPA4Q9UI42 421 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 MRPL11Q9Y3B7 192 aaKnown RBP12.14□□□□□ -0.47
UBE2F-220ENST00000472479 RABGAP1Q9Y3P9 1069 aa12.14□□□□□ -0.47
UBE2F-220ENST00000472479 TRPA1O75762 1119 aa12.13□□□□□ -0.47
UBE2F-220ENST00000472479 GUCY1B3Q02153 619 aa12.13□□□□□ -0.47
UBE2F-220ENST00000472479 TMEM132BQ14DG7 1078 aa12.13□□□□□ -0.47
UBE2F-220ENST00000472479 MCTP1Q6DN14 999 aa12.13□□□□□ -0.47
UBE2F-220ENST00000472479 CCDC148Q8NFR7 591 aa12.13□□□□□ -0.47
UBE2F-220ENST00000472479 SMARCC2Q8TAQ2 1214 aa12.13□□□□□ -0.47
UBE2F-220ENST00000472479 CUL5Q93034 780 aa12.13□□□□□ -0.47
UBE2F-220ENST00000472479 AGBL1Q96MI9 1066 aa12.13□□□□□ -0.47
UBE2F-220ENST00000472479 TEX13BQ9BXU2 312 aa12.13□□□□□ -0.47
UBE2F-220ENST00000472479 BRMS1Q9HCU9 246 aa12.13□□□□□ -0.47
UBE2F-220ENST00000472479 VPS54Q9P1Q0 977 aa12.13□□□□□ -0.47
UBE2F-220ENST00000472479 STK36Q9NRP7 1315 aa12.13□□□□□ -0.47
UBE2F-220ENST00000472479 PHIPQ8WWQ0 1821 aa12.12□□□□□ -0.47
UBE2F-220ENST00000472479 ABCB11O95342 1321 aa12.12□□□□□ -0.47
UBE2F-220ENST00000472479 VPS37CA5D8V6 355 aaPredicted RBP12.12□□□□□ -0.47
UBE2F-220ENST00000472479 SMCO2A6NFE2 343 aa12.12□□□□□ -0.47
UBE2F-220ENST00000472479 ICAM1P05362 532 aa12.12□□□□□ -0.47
UBE2F-220ENST00000472479 OAZ1P54368 228 aa12.12□□□□□ -0.47
UBE2F-220ENST00000472479 FUT2Q10981 343 aa12.12□□□□□ -0.47
UBE2F-220ENST00000472479 LBX2Q6XYB7 198 aa12.12□□□□□ -0.47
UBE2F-220ENST00000472479 TRERF1Q96PN7 1200 aa12.12□□□□□ -0.47
UBE2F-220ENST00000472479 SPATC1LQ9H0A9 340 aa12.12□□□□□ -0.47
UBE2F-220ENST00000472479 C6orf50Q9HD87 102 aa12.12□□□□□ -0.47
UBE2F-220ENST00000472479 hCG_1984214I3L0E3 225 aa12.11□□□□□ -0.47
UBE2F-220ENST00000472479 CA12O43570 354 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms