RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 PLCG2P16885 1265 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 CDK8P49336 464 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 EZH2Q15910 746 aaKnown RBP14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 C16orf86Q6ZW13 317 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 SLF2Q8IX21 1173 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 PNMA1Q8ND90 353 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 SNED1Q8TER0 1413 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 KAT14Q9H8E8 782 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 CABP5Q9NP86 173 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 PCDHB6Q9Y5E3 794 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 NT5C2P49902 561 aa14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 IRX3P78415 501 aaPredicted RBP14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 RILPL1Q5EBL4 403 aa14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 ZNF444Q8N0Y2 327 aaPredicted RBP14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 STAG2Q8N3U4 1231 aa14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 ABCB6Q9NP58 842 aa14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 KCNQ5Q9NR82 932 aa14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 KCNH3Q9ULD8 1083 aa14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 RGPD3A6NKT7 1758 aaPredicted RBP14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 RGPD4Q7Z3J3 1758 aa14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 FAM237AA0A1B0GTK4 181 aa14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 TFRCP02786 760 aaKnown RBP14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 GRIN1Q05586 938 aa14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 SPECC1Q5M775 1068 aa14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 C2CD5Q86YS7 1000 aa14.93□□□□□ -0.02
SCAMP4-207ENST00000472442 EIF3JO75822 258 aaKnown RBP14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 ZNF18P17022 549 aa14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 CDC23Q9UJX2 597 aa14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 RAB21Q9UL25 225 aa14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 RHOXF2BP0C7M4 288 aa14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 EN1Q05925 392 aaPredicted RBP14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 SLC35G1Q2M3R5 365 aa14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 NOM1Q5C9Z4 860 aaKnown RBP14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 CEP112Q8N8E3 955 aa14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 TNFRSF25Q93038 417 aa14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 CAMKK2Q96RR4 588 aa14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 RHOXF2Q9BQY4 288 aa14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 MAN1B1Q9UKM7 699 aa14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 L1RE1Q9UN81 338 aa14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 TTF2Q9UNY4 1162 aaKnown RBP14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 SUGT1Q9Y2Z0 365 aa14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 FOCADQ5VW36 1801 aa14.92□□□□□ -0.02
SCAMP4-207ENST00000472442 ADAMTS3O15072 1205 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 PHACTR2O75167 634 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 ERLIN1O75477 346 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 XBP1P17861 261 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 SLC15A2Q16348 729 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 RAD9BQ6WBX8 426 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 GOLGA6L1Q8N7Z2 621 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 MSANTD4Q8NCY6 345 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 TMEM47Q9BQJ4 181 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 MAD2L2Q9UI95 211 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 MYH1P12882 1939 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 QSER1Q2KHR3 1735 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 WNT7AO00755 349 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 KRT2P35908 639 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 EYA3Q99504 573 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 DDX4Q9NQI0 724 aaKnown RBP14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 SAMSN1Q9NSI8 373 aaKnown RBP14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 FBXO2Q9UK22 296 aaPredicted RBP14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 ADAMTSL1Q8N6G6 1762 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 POTEB2H3BUK9 544 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 KIF5CO60282 957 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 SCG2P13521 617 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 CHRNA5P30532 468 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 VSNL1P62760 191 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 GRM4Q14833 912 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 PFKFB3Q16875 520 aaPredicted RBP14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 CCDC102AQ96A19 550 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 DBNDD1Q9H9R9 158 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 STX8Q9UNK0 236 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 ADGRG1Q9Y653 693 aa14.91□□□□□ -0.02
SCAMP4-207ENST00000472442 SLX4Q8IY92 1834 aa14.9□□□□□ -0.02
SCAMP4-207ENST00000472442 AKR1B15C9JRZ8 316 aaPredicted RBP14.9□□□□□ -0.02
SCAMP4-207ENST00000472442 PRR29P0C7W0 189 aa14.9□□□□□ -0.02
SCAMP4-207ENST00000472442 ATP2B1P20020 1258 aa14.9□□□□□ -0.02
SCAMP4-207ENST00000472442 PTPREP23469 700 aa14.9□□□□□ -0.02
SCAMP4-207ENST00000472442 KIF5BP33176 963 aa14.9□□□□□ -0.02
SCAMP4-207ENST00000472442 SCNN1DP51172 638 aa14.9□□□□□ -0.02
SCAMP4-207ENST00000472442 ZNF569Q5MCW4 686 aa14.9□□□□□ -0.02
SCAMP4-207ENST00000472442 RASGRP2Q7LDG7 609 aa14.9□□□□□ -0.02
SCAMP4-207ENST00000472442 KRI1Q8N9T8 703 aaKnown RBP14.9□□□□□ -0.02
SCAMP4-207ENST00000472442 PICALMQ13492 652 aa14.9□□□□□ -0.02
SCAMP4-207ENST00000472442 KIF4BQ2VIQ3 1234 aa14.9□□□□□ -0.02
SCAMP4-207ENST00000472442 CPLX3Q8WVH0 158 aa14.9□□□□□ -0.02
SCAMP4-207ENST00000472442 ANKRD65E5RJM6 399 aa14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 H0YIN7 160 aa14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 CYTH3O43739 400 aa14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 MDM2Q00987 491 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 CASP8Q14790 479 aa14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 POSTNQ15063 836 aa14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 CCDC178Q5BJE1 867 aa14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 STYK1Q6J9G0 422 aa14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 PACS2Q86VP3 889 aa14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 NEDD1Q8NHV4 660 aa14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 ENOX1Q8TC92 643 aaKnown RBP14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 MED15Q96RN5 788 aa14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 ZNF287Q9HBT7 754 aa14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 EIF3CLB5ME19 914 aaKnown RBP14.89□□□□□ -0.03
SCAMP4-207ENST00000472442 RPS6KA5O75582 802 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms