RNA–Protein interactions for RNA: ENST00000472390.1

RHBDF1-207, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-207ENST00000472390 MKL1Q969V6 931 aa22.53■■□□□ 1.2
RHBDF1-207ENST00000472390 RNPC3Q96LT9 517 aaKnown RBP22.53■■□□□ 1.2
RHBDF1-207ENST00000472390 KATNBL1Q9H079 304 aa22.53■■□□□ 1.2
RHBDF1-207ENST00000472390 NAPBQ9H115 298 aa22.53■■□□□ 1.2
RHBDF1-207ENST00000472390 TMEM39AQ9NV64 488 aa22.53■■□□□ 1.2
RHBDF1-207ENST00000472390 FAM184BQ9ULE4 1060 aa22.53■■□□□ 1.2
RHBDF1-207ENST00000472390 ZNF536O15090 1300 aa22.53■■□□□ 1.2
RHBDF1-207ENST00000472390 KIAA0355O15063 1070 aa22.52■■□□□ 1.2
RHBDF1-207ENST00000472390 C6orf222P0C671 652 aaPredicted RBP22.52■■□□□ 1.2
RHBDF1-207ENST00000472390 BMP3P12645 472 aa22.52■■□□□ 1.2
RHBDF1-207ENST00000472390 ACVR2BQ13705 512 aa22.52■■□□□ 1.2
RHBDF1-207ENST00000472390 KCTD1Q719H9 257 aa22.52■■□□□ 1.2
RHBDF1-207ENST00000472390 GMCL1P1Q8NEA9 526 aa22.52■■□□□ 1.2
RHBDF1-207ENST00000472390 SEMA6BQ9H3T3 888 aa22.52■■□□□ 1.2
RHBDF1-207ENST00000472390 FEM1BQ9UK73 627 aa22.52■■□□□ 1.2
RHBDF1-207ENST00000472390 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.52■■□□□ 1.2
RHBDF1-207ENST00000472390 PRUNE2Q8WUY3 3088 aa22.52■■□□□ 1.2
RHBDF1-207ENST00000472390 ASTN1O14525 1302 aa22.52■■□□□ 1.2
RHBDF1-207ENST00000472390 TTC41PQ6P2S7 1318 aa22.52■■□□□ 1.2
RHBDF1-207ENST00000472390 SALL3Q9BXA9 1300 aa22.52■■□□□ 1.2
RHBDF1-207ENST00000472390 MCCP23508 829 aa22.51■■□□□ 1.19
RHBDF1-207ENST00000472390 BEX3Q00994 111 aa22.51■■□□□ 1.19
RHBDF1-207ENST00000472390 TMEM63BQ5T3F8 832 aa22.51■■□□□ 1.19
RHBDF1-207ENST00000472390 CCDC174Q6PII3 467 aa22.51■■□□□ 1.19
RHBDF1-207ENST00000472390 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.51■■□□□ 1.19
RHBDF1-207ENST00000472390 CCDC144CPQ8IYA2 1237 aa22.51■■□□□ 1.19
RHBDF1-207ENST00000472390 PURBQ96QR8 312 aaKnown RBP22.51■■□□□ 1.19
RHBDF1-207ENST00000472390 COL25A1Q9BXS0 654 aaPredicted RBP22.51■■□□□ 1.19
RHBDF1-207ENST00000472390 RNF146Q9NTX7 359 aa22.51■■□□□ 1.19
RHBDF1-207ENST00000472390 SOWAHBA6NEL2 793 aa22.5■■□□□ 1.19
RHBDF1-207ENST00000472390 CTAGE5O15320 804 aa22.5■■□□□ 1.19
RHBDF1-207ENST00000472390 MX1P20591 662 aa22.5■■□□□ 1.19
RHBDF1-207ENST00000472390 IKQ13123 557 aaPredicted RBP22.5■■□□□ 1.19
RHBDF1-207ENST00000472390 A1CFQ9NQ94 594 aaKnown RBP22.5■■□□□ 1.19
RHBDF1-207ENST00000472390 IL17RBQ9NRM6 502 aa22.5■■□□□ 1.19
RHBDF1-207ENST00000472390 DUSP11O75319 330 aaKnown RBP22.49■■□□□ 1.19
RHBDF1-207ENST00000472390 ASGR1P07306 291 aa22.49■■□□□ 1.19
RHBDF1-207ENST00000472390 FPGSQ05932 587 aa22.49■■□□□ 1.19
RHBDF1-207ENST00000472390 MUM1L1Q5H9M0 696 aa22.49■■□□□ 1.19
RHBDF1-207ENST00000472390 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.49■■□□□ 1.19
RHBDF1-207ENST00000472390 TSEN34Q9BSV6 310 aaKnown RBP22.49■■□□□ 1.19
RHBDF1-207ENST00000472390 NACAP1Q9BZK3 213 aa22.49■■□□□ 1.19
RHBDF1-207ENST00000472390 TBX21Q9UL17 535 aa22.49■■□□□ 1.19
RHBDF1-207ENST00000472390 ALAS1P13196 640 aa22.48■■□□□ 1.19
RHBDF1-207ENST00000472390 SMAD3P84022 425 aaKnown RBP22.48■■□□□ 1.19
RHBDF1-207ENST00000472390 PDE4BQ07343 736 aa22.48■■□□□ 1.19
RHBDF1-207ENST00000472390 ANKRD33Q7Z3H0 272 aa22.48■■□□□ 1.19
RHBDF1-207ENST00000472390 ZNF467Q7Z7K2 595 aaPredicted RBP22.48■■□□□ 1.19
RHBDF1-207ENST00000472390 MSL3Q8N5Y2 521 aaKnown RBP22.48■■□□□ 1.19
RHBDF1-207ENST00000472390 FAM133AQ8N9E0 248 aa22.48■■□□□ 1.19
RHBDF1-207ENST00000472390 CHST13Q8NET6 341 aa22.48■■□□□ 1.19
RHBDF1-207ENST00000472390 PPP1R12CQ9BZL4 782 aa22.48■■□□□ 1.19
RHBDF1-207ENST00000472390 UPF3AQ9H1J1 476 aaKnown RBP22.48■■□□□ 1.19
RHBDF1-207ENST00000472390 STX8Q9UNK0 236 aa22.48■■□□□ 1.19
RHBDF1-207ENST00000472390 ERC2O15083 957 aa22.47■■□□□ 1.19
RHBDF1-207ENST00000472390 SLC1A4P43007 532 aa22.47■■□□□ 1.19
RHBDF1-207ENST00000472390 STAT2P52630 851 aa22.47■■□□□ 1.19
RHBDF1-207ENST00000472390 MAFAQ8NHW3 353 aaPredicted RBP22.47■■□□□ 1.19
RHBDF1-207ENST00000472390 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.47■■□□□ 1.196e-9■■□□□ 13.1
RHBDF1-207ENST00000472390 ACAD9Q9H845 621 aa22.47■■□□□ 1.19
RHBDF1-207ENST00000472390 ZNF287Q9HBT7 754 aa22.47■■□□□ 1.19
RHBDF1-207ENST00000472390 PDGFCQ9NRA1 345 aa22.47■■□□□ 1.19
RHBDF1-207ENST00000472390 VCANP13611 3396 aa22.47■■□□□ 1.19
RHBDF1-207ENST00000472390 MOXD2PA6NHM9 499 aa22.46■■□□□ 1.19
RHBDF1-207ENST00000472390 GRXCR1A8MXD5 290 aa22.46■■□□□ 1.19
RHBDF1-207ENST00000472390 DCDC2CA8MYV0 355 aa22.46■■□□□ 1.19
RHBDF1-207ENST00000472390 CST5P28325 142 aaPredicted RBP22.46■■□□□ 1.19
RHBDF1-207ENST00000472390 TTBK2Q6IQ55 1244 aa22.46■■□□□ 1.19
RHBDF1-207ENST00000472390 C16orf59Q7L2K0 433 aa22.46■■□□□ 1.19
RHBDF1-207ENST00000472390 EEPD1Q7L9B9 569 aa22.46■■□□□ 1.19
RHBDF1-207ENST00000472390 VTI1AQ96AJ9 217 aa22.46■■□□□ 1.19
RHBDF1-207ENST00000472390 CRBNQ96SW2 442 aa22.46■■□□□ 1.19
RHBDF1-207ENST00000472390 ABHD16BQ9H3Z7 469 aa22.46■■□□□ 1.19
RHBDF1-207ENST00000472390 FBXO40Q9UH90 709 aa22.46■■□□□ 1.19
RHBDF1-207ENST00000472390 TSPY2A6NKD2 308 aa22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 ACRP10323 421 aa22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 OAZ1P54368 228 aa22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 GJA9P57773 515 aa22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 GNASQ5JWF2 1037 aa22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 FBXO16Q8IX29 292 aaPredicted RBP22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 NUP133Q8WUM0 1156 aa22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 STAG1Q8WVM7 1258 aa22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 GMCL1Q96IK5 515 aa22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 FAM227BQ96M60 508 aa22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 TRERF1Q96PN7 1200 aa22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 PRR12Q9ULL5 1215 aa22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 UMODL1Q5DID0 1318 aa22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 GBF1Q92538 1859 aa22.45■■□□□ 1.18
RHBDF1-207ENST00000472390 A0A0D9SFI3 127 aa22.44■■□□□ 1.18
RHBDF1-207ENST00000472390 RANBP6O60518 1105 aaKnown RBP22.44■■□□□ 1.18
RHBDF1-207ENST00000472390 SLC16A2P36021 539 aa22.44■■□□□ 1.18
RHBDF1-207ENST00000472390 CDK7P50613 346 aa22.44■■□□□ 1.18
RHBDF1-207ENST00000472390 CCDC96Q2M329 555 aa22.44■■□□□ 1.18
RHBDF1-207ENST00000472390 CXCL17Q6UXB2 119 aa22.44■■□□□ 1.18
RHBDF1-207ENST00000472390 NOL8Q76FK4 1167 aaKnown RBP22.44■■□□□ 1.18
RHBDF1-207ENST00000472390 GLT1D1Q96MS3 346 aa22.44■■□□□ 1.18
RHBDF1-207ENST00000472390 TOX2Q96NM4 488 aa22.44■■□□□ 1.18
RHBDF1-207ENST00000472390 SYNPO2Q9UMS6 1093 aa22.44■■□□□ 1.18
RHBDF1-207ENST00000472390 FRMPD2Q68DX3 1309 aaPredicted RBP22.43■■□□□ 1.18
RHBDF1-207ENST00000472390 RBAK-RBAKDNI3L0D1 243 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms