RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 PRKCZQ05513 592 aa17.61■□□□□ 0.41
SNX13-205ENST00000471744 RUFY3Q7L099 469 aa17.61■□□□□ 0.41
SNX13-205ENST00000471744 CHST13Q8NET6 341 aa17.61■□□□□ 0.41
SNX13-205ENST00000471744 LRRC2Q9BYS8 371 aa17.61■□□□□ 0.41
SNX13-205ENST00000471744 RAVER2Q9HCJ3 691 aaKnown RBP17.61■□□□□ 0.41
SNX13-205ENST00000471744 ZSWIM6Q9HCJ5 1215 aa17.61■□□□□ 0.41
SNX13-205ENST00000471744 MAD2L2Q9UI95 211 aa17.61■□□□□ 0.41
SNX13-205ENST00000471744 ICAM1P05362 532 aa17.6■□□□□ 0.41
SNX13-205ENST00000471744 RGS2P41220 211 aa17.6■□□□□ 0.41
SNX13-205ENST00000471744 FLT3LGP49771 235 aa17.6■□□□□ 0.41
SNX13-205ENST00000471744 COL9A3Q14050 684 aaPredicted RBP17.6■□□□□ 0.41
SNX13-205ENST00000471744 MORN1Q5T089 497 aa17.6■□□□□ 0.41
SNX13-205ENST00000471744 NUP133Q8WUM0 1156 aa17.6■□□□□ 0.41
SNX13-205ENST00000471744 IL17RAQ96F46 866 aa17.6■□□□□ 0.41
SNX13-205ENST00000471744 LZTS2Q9BRK4 669 aa17.6■□□□□ 0.41
SNX13-205ENST00000471744 GPHNQ9NQX3 736 aaPredicted RBP17.6■□□□□ 0.41
SNX13-205ENST00000471744 SLC5A4Q9NY91 659 aa17.6■□□□□ 0.41
SNX13-205ENST00000471744 GJD2Q9UKL4 321 aa17.6■□□□□ 0.41
SNX13-205ENST00000471744 PTCH2Q9Y6C5 1203 aa17.6■□□□□ 0.41
SNX13-205ENST00000471744 SMCHD1A6NHR9 2005 aa17.6■□□□□ 0.41
SNX13-205ENST00000471744 DHX16O60231 1041 aaKnown RBP17.59■□□□□ 0.41
SNX13-205ENST00000471744 SEC24BO95487 1268 aa17.59■□□□□ 0.41
SNX13-205ENST00000471744 FCER1AP12319 257 aa17.59■□□□□ 0.41
SNX13-205ENST00000471744 XRCC5P13010 732 aaKnown RBP17.59■□□□□ 0.41
SNX13-205ENST00000471744 SMARCA1P28370 1054 aa17.59■□□□□ 0.41
SNX13-205ENST00000471744 GRB14Q14449 540 aa17.59■□□□□ 0.41
SNX13-205ENST00000471744 APOA5Q6Q788 366 aa17.59■□□□□ 0.41
SNX13-205ENST00000471744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNX13-205ENST00000471744 NBPF11Q86T75 865 aa17.59■□□□□ 0.41
SNX13-205ENST00000471744 TRMT44Q8IYL2 757 aaKnown RBP17.59■□□□□ 0.41
SNX13-205ENST00000471744 ADGRF4Q8IZF3 695 aa17.59■□□□□ 0.41
SNX13-205ENST00000471744 SLAIN1Q8ND83 568 aa17.59■□□□□ 0.41
SNX13-205ENST00000471744 PXYLP1Q8TE99 480 aa17.59■□□□□ 0.41
SNX13-205ENST00000471744 TCEANC2Q96MN5 208 aa17.59■□□□□ 0.41
SNX13-205ENST00000471744 AGXT2Q9BYV1 514 aa17.59■□□□□ 0.41
SNX13-205ENST00000471744 UBA5Q9GZZ9 404 aa17.59■□□□□ 0.41
SNX13-205ENST00000471744 UPF2Q9HAU5 1272 aaKnown RBP17.59■□□□□ 0.41
SNX13-205ENST00000471744 GABRQQ9UN88 632 aa17.59■□□□□ 0.41
SNX13-205ENST00000471744 ZNF536O15090 1300 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 TRAF1Q13077 416 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 MAP2K5Q13163 448 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 KCTD2Q14681 263 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 PPP2R5BQ15173 497 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 SLC9C1Q4G0N8 1177 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 CCDC174Q6PII3 467 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 Q6ZUG5 572 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 STAG2Q8N3U4 1231 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 USP6NLQ92738 828 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 MMP19Q99542 508 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 APBA2Q99767 749 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 RBM28Q9NW13 759 aaKnown RBP17.58■□□□□ 0.4
SNX13-205ENST00000471744 CCPG1Q9ULG6 757 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 PLXNA1Q9UIW2 1896 aa17.58■□□□□ 0.4
SNX13-205ENST00000471744 ZBTB43O43298 467 aa17.57■□□□□ 0.4
SNX13-205ENST00000471744 ADCY3O60266 1144 aa17.57■□□□□ 0.4
SNX13-205ENST00000471744 HOXC6P09630 235 aa17.57■□□□□ 0.4
SNX13-205ENST00000471744 CPA1P15085 419 aa17.57■□□□□ 0.4
SNX13-205ENST00000471744 GRK4P32298 578 aa17.57■□□□□ 0.4
SNX13-205ENST00000471744 C1QBPQ07021 282 aaKnown RBP17.57■□□□□ 0.4
SNX13-205ENST00000471744 CDC37Q16543 378 aaPredicted RBP17.57■□□□□ 0.4
SNX13-205ENST00000471744 MICU3Q86XE3 530 aa17.57■□□□□ 0.4
SNX13-205ENST00000471744 FANCBQ8NB91 859 aa17.57■□□□□ 0.4
SNX13-205ENST00000471744 AGBL1Q96MI9 1066 aa17.57■□□□□ 0.4
SNX13-205ENST00000471744 MYL10Q9BUA6 226 aa17.57■□□□□ 0.4
SNX13-205ENST00000471744 RIOX1Q9H6W3 641 aa17.57■□□□□ 0.4
SNX13-205ENST00000471744 ACAD9Q9H845 621 aa17.57■□□□□ 0.4
SNX13-205ENST00000471744 HPS5Q9UPZ3 1129 aa17.57■□□□□ 0.4
SNX13-205ENST00000471744 KLF18A0A0U1RQI7 1052 aa17.56■□□□□ 0.4
SNX13-205ENST00000471744 ALAS1P13196 640 aa17.56■□□□□ 0.4
SNX13-205ENST00000471744 ADORA2AP29274 412 aa17.56■□□□□ 0.4
SNX13-205ENST00000471744 SLC4A3P48751 1232 aa17.56■□□□□ 0.4
SNX13-205ENST00000471744 DPP9Q86TI2 863 aa17.56■□□□□ 0.4
SNX13-205ENST00000471744 BRF1Q92994 677 aa17.56■□□□□ 0.4
SNX13-205ENST00000471744 MTMR8Q96EF0 704 aa17.56■□□□□ 0.4
SNX13-205ENST00000471744 TRERF1Q96PN7 1200 aa17.56■□□□□ 0.4
SNX13-205ENST00000471744 SPZ1Q9BXG8 430 aa17.56■□□□□ 0.4
SNX13-205ENST00000471744 MAF1Q9H063 256 aa17.56■□□□□ 0.4
SNX13-205ENST00000471744 JMJD4Q9H9V9 463 aa17.56■□□□□ 0.4
SNX13-205ENST00000471744 RNF146Q9NTX7 359 aa17.56■□□□□ 0.4
SNX13-205ENST00000471744 RIPK3Q9Y572 518 aa17.56■□□□□ 0.4
SNX13-205ENST00000471744 KIAA0100Q14667 2235 aaKnown RBP17.55■□□□□ 0.4
SNX13-205ENST00000471744 PFASO15067 1338 aa17.55■□□□□ 0.4
SNX13-205ENST00000471744 CCDC196A0A1B0GTZ2 297 aa17.55■□□□□ 0.4
SNX13-205ENST00000471744 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
SNX13-205ENST00000471744 CYP2B6P20813 491 aa17.55■□□□□ 0.4
SNX13-205ENST00000471744 SNAP25P60880 206 aa17.55■□□□□ 0.4
SNX13-205ENST00000471744 ARMC5Q96C12 935 aa17.55■□□□□ 0.4
SNX13-205ENST00000471744 ABHD8Q96I13 439 aa17.55■□□□□ 0.4
SNX13-205ENST00000471744 UPF3BQ9BZI7 483 aaKnown RBP17.55■□□□□ 0.4
SNX13-205ENST00000471744 CPVLQ9H3G5 476 aa17.55■□□□□ 0.4
SNX13-205ENST00000471744 VAT1LQ9HCJ6 419 aa17.55■□□□□ 0.4
SNX13-205ENST00000471744 PDRG1Q9NUG6 133 aa17.55■□□□□ 0.4
SNX13-205ENST00000471744 BRPF3Q9ULD4 1205 aa17.55■□□□□ 0.4
SNX13-205ENST00000471744 ABCB11O95342 1321 aa17.54■□□□□ 0.4
SNX13-205ENST00000471744 ZBTB5O15062 677 aa17.54■□□□□ 0.4
SNX13-205ENST00000471744 EVCP57679 992 aa17.54■□□□□ 0.4
SNX13-205ENST00000471744 UBXN2AP68543 259 aa17.54■□□□□ 0.4
SNX13-205ENST00000471744 ANKRD1Q15327 319 aa17.54■□□□□ 0.4
SNX13-205ENST00000471744 RTN1Q16799 776 aa17.54■□□□□ 0.4
SNX13-205ENST00000471744 QRICH1Q2TAL8 776 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms