RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 UBA5Q9GZZ9 404 aa16.3■□□□□ 0.2
SSR4-207ENST00000471724 RIOX1Q9H6W3 641 aa16.3■□□□□ 0.2
SSR4-207ENST00000471724 SH2B1Q9NRF2 756 aaPredicted RBP16.3■□□□□ 0.2
SSR4-207ENST00000471724 RBM27Q9P2N5 1060 aaKnown RBP16.3■□□□□ 0.2
SSR4-207ENST00000471724 RBPJLQ9UBG7 517 aa16.3■□□□□ 0.2
SSR4-207ENST00000471724 SEC63Q9UGP8 760 aaKnown RBP16.3■□□□□ 0.2
SSR4-207ENST00000471724 ZNF214Q9UL59 606 aaPredicted RBP16.3■□□□□ 0.2
SSR4-207ENST00000471724 ZSWIM8A7E2V4 1837 aa16.3■□□□□ 0.2
SSR4-207ENST00000471724 CPLX1O14810 134 aa16.29■□□□□ 0.2
SSR4-207ENST00000471724 PFKFB2O60825 505 aa16.29■□□□□ 0.2
SSR4-207ENST00000471724 CDKL5O76039 1030 aa16.29■□□□□ 0.2
SSR4-207ENST00000471724 PLS1Q14651 629 aa16.29■□□□□ 0.2
SSR4-207ENST00000471724 CDC37Q16543 378 aaPredicted RBP16.29■□□□□ 0.2
SSR4-207ENST00000471724 SHCBP1Q8NEM2 672 aa16.29■□□□□ 0.2
SSR4-207ENST00000471724 RRP36Q96EU6 259 aaKnown RBP16.29■□□□□ 0.2
SSR4-207ENST00000471724 SPATC1LQ9H0A9 340 aa16.29■□□□□ 0.2
SSR4-207ENST00000471724 CPVLQ9H3G5 476 aa16.29■□□□□ 0.2
SSR4-207ENST00000471724 TXNRD2Q9NNW7 524 aa16.29■□□□□ 0.2
SSR4-207ENST00000471724 BTBD7Q9P203 1132 aa16.29■□□□□ 0.2
SSR4-207ENST00000471724 ZBTB5O15062 677 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 CNMDO75829 334 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 SLC25A27O95847 323 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 ICAM1P05362 532 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 CDC27P30260 824 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 CCT2P78371 535 aaKnown RBP16.28■□□□□ 0.2
SSR4-207ENST00000471724 STK3Q13188 491 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 KIF22Q14807 665 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 TMEM132BQ14DG7 1078 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 SNRNP48Q6IEG0 339 aaKnown RBP16.28■□□□□ 0.2
SSR4-207ENST00000471724 RIOX2Q8IUF8 465 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 CCAR1Q8IX12 1150 aaKnown RBP16.28■□□□□ 0.2
SSR4-207ENST00000471724 SRBD1Q8N5C6 995 aaKnown RBP16.28■□□□□ 0.2
SSR4-207ENST00000471724 GTF3C6Q969F1 213 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 MTMR8Q96EF0 704 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 LARP6Q9BRS8 491 aaKnown RBP16.28■□□□□ 0.2
SSR4-207ENST00000471724 JMJD4Q9H9V9 463 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 CCPG1Q9ULG6 757 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 SMCHD1A6NHR9 2005 aa16.28■□□□□ 0.2
SSR4-207ENST00000471724 PLXNA1Q9UIW2 1896 aa16.27■□□□□ 0.2
SSR4-207ENST00000471724 CYTH3O43739 400 aa16.27■□□□□ 0.2
SSR4-207ENST00000471724 IFNAR1P17181 557 aa16.27■□□□□ 0.2
SSR4-207ENST00000471724 MAPK4P31152 587 aa16.27■□□□□ 0.2
SSR4-207ENST00000471724 STAT3P40763 770 aa16.27■□□□□ 0.2
SSR4-207ENST00000471724 LACTBP83111 547 aaPredicted RBP16.27■□□□□ 0.2
SSR4-207ENST00000471724 ME3Q16798 604 aa16.27■□□□□ 0.2
SSR4-207ENST00000471724 QRICH1Q2TAL8 776 aa16.27■□□□□ 0.2
SSR4-207ENST00000471724 TKFCQ3LXA3 575 aa16.27■□□□□ 0.2
SSR4-207ENST00000471724 CCDC174Q6PII3 467 aa16.27■□□□□ 0.2
SSR4-207ENST00000471724 POTEEQ6S8J3 1075 aa16.27■□□□□ 0.2
SSR4-207ENST00000471724 HOMER1Q86YM7 354 aa16.27■□□□□ 0.2
SSR4-207ENST00000471724 TRIM22Q8IYM9 498 aa16.27■□□□□ 0.2
SSR4-207ENST00000471724 CPXCR1Q8N123 301 aa16.27■□□□□ 0.2
SSR4-207ENST00000471724 NCOA5Q9HCD5 579 aaKnown RBP16.27■□□□□ 0.2
SSR4-207ENST00000471724 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.2
SSR4-207ENST00000471724 RAVER2Q9HCJ3 691 aaKnown RBP16.27■□□□□ 0.2
SSR4-207ENST00000471724 FAM217BQ9NTX9 383 aaPredicted RBP16.27■□□□□ 0.2
SSR4-207ENST00000471724 ZNFX1Q9P2E3 1918 aaKnown RBP16.27■□□□□ 0.19
SSR4-207ENST00000471724 ZNF536O15090 1300 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 PNMA6FA0A0J9YX94 578 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 hCG_1984214I3L0E3 225 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 CAPN15O75808 1086 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 LARGE1O95461 756 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 ADD1P35611 737 aaKnown RBP16.26■□□□□ 0.19
SSR4-207ENST00000471724 FCGRTP55899 365 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 AKAP17AQ02040 695 aaKnown RBP16.26■□□□□ 0.19
SSR4-207ENST00000471724 SCRN1Q12765 414 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 FBXO46Q6PJ61 603 aaPredicted RBP16.26■□□□□ 0.19
SSR4-207ENST00000471724 NBPF11Q86T75 865 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 FBXO11Q86XK2 927 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 ZNF713Q8N859 430 aaPredicted RBP16.26■□□□□ 0.19
SSR4-207ENST00000471724 AMNQ9BXJ7 453 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 MOV10L1Q9BXT6 1211 aaKnown RBP16.26■□□□□ 0.19
SSR4-207ENST00000471724 RNF26Q9BY78 433 aaPredicted RBP16.26■□□□□ 0.19
SSR4-207ENST00000471724 MROH8Q9H579 483 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 VAT1LQ9HCJ6 419 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 FBXO40Q9UH90 709 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 DOCK3Q8IZD9 2030 aa16.26■□□□□ 0.19
SSR4-207ENST00000471724 ABCB11O95342 1321 aa16.25■□□□□ 0.19
SSR4-207ENST00000471724 FUT2Q10981 343 aa16.25■□□□□ 0.19
SSR4-207ENST00000471724 SLC35G1Q2M3R5 365 aa16.25■□□□□ 0.19
SSR4-207ENST00000471724 NCAPG2Q86XI2 1143 aa16.25■□□□□ 0.19
SSR4-207ENST00000471724 CMTR1Q8N1G2 835 aaKnown RBP16.25■□□□□ 0.19
SSR4-207ENST00000471724 CHST13Q8NET6 341 aa16.25■□□□□ 0.19
SSR4-207ENST00000471724 CD99L2Q8TCZ2 262 aa16.25■□□□□ 0.19
SSR4-207ENST00000471724 PIGSQ96S52 555 aa16.25■□□□□ 0.19
SSR4-207ENST00000471724 EFCC1Q9HA90 598 aa16.25■□□□□ 0.19
SSR4-207ENST00000471724 TRIM17Q9Y577 477 aa16.25■□□□□ 0.19
SSR4-207ENST00000471724 IVNS1ABPQ9Y6Y0 642 aa16.25■□□□□ 0.19
SSR4-207ENST00000471724 STK36Q9NRP7 1315 aa16.24■□□□□ 0.19
SSR4-207ENST00000471724 TNPO2O14787 897 aaKnown RBP16.24■□□□□ 0.19
SSR4-207ENST00000471724 GNRH1P01148 92 aa16.24■□□□□ 0.19
SSR4-207ENST00000471724 ALAS1P13196 640 aa16.24■□□□□ 0.19
SSR4-207ENST00000471724 ERCC3P19447 782 aa16.24■□□□□ 0.19
SSR4-207ENST00000471724 SNAP25P60880 206 aa16.24■□□□□ 0.19
SSR4-207ENST00000471724 NTRK3Q16288 839 aa16.24■□□□□ 0.19
SSR4-207ENST00000471724 WDR78Q5VTH9 848 aa16.24■□□□□ 0.19
SSR4-207ENST00000471724 OTOP1Q7RTM1 612 aa16.24■□□□□ 0.19
SSR4-207ENST00000471724 CCDC82Q8N4S0 544 aa16.24■□□□□ 0.19
SSR4-207ENST00000471724 AGBL1Q96MI9 1066 aa16.24■□□□□ 0.19
SSR4-207ENST00000471724 PORCNQ9H237 461 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms