RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 PCDHA12Q9UN75 941 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 RPS6KA4O75676 772 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 CRKP46108 304 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 RNF207Q6ZRF8 634 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 AOPEPQ8N6M6 819 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 RSAD2Q8WXG1 361 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 ANGPTL3Q9Y5C1 460 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 KRT86O43790 486 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 UBE2HP62256 183 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 BFSP1Q12934 665 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 HADHQ16836 314 aaKnown RBP9.44□□□□□ -0.9
CD47-204ENST00000471694 ERCC6LQ2NKX8 1250 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 PDXDC2PQ6P474 469 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 CEP128Q6ZU80 1094 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 PNMA1Q8ND90 353 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 VPS54Q9P1Q0 977 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 PARD3Q8TEW0 1356 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 UNC13AQ9UPW8 1703 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 TECP42680 631 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 SRPK1Q96SB4 655 aaKnown RBP9.44□□□□□ -0.9
CD47-204ENST00000471694 KANSL2Q9H9L4 492 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 FAM8A1Q9UBU6 413 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.44□□□□□ -0.9
CD47-204ENST00000471694 V9GYY5 206 aaPredicted RBP9.44□□□□□ -0.9
CD47-204ENST00000471694 MAST1Q9Y2H9 1570 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 WDR97A6NE52 1622 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 F8W8V4 182 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 SLC16A2P36021 539 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 SNAPC2Q13487 334 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 ACBD5Q5T8D3 534 aaPredicted RBP9.44□□□□□ -0.9
CD47-204ENST00000471694 DDX53Q86TM3 631 aaKnown RBP9.44□□□□□ -0.9
CD47-204ENST00000471694 FAM160B2Q86V87 743 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 CEP170P1Q96L14 293 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 GRPEL1Q9HAV7 217 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 SLC38A10Q9HBR0 1119 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 KMT5AQ9NQR1 393 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 SAMD9Q5K651 1589 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 USP19O94966 1318 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 ARL4DP49703 201 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 SCN4BQ8IWT1 228 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 FAM178BQ8IXR5 827 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 MICALL2Q8IY33 904 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 GIMAP7Q8NHV1 300 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 PHKBQ93100 1093 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 SPATA17Q96L03 361 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 TTC25Q96NG3 672 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 LRRC4Q9HBW1 653 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 BZW2Q9Y6E2 419 aaKnown RBP9.44□□□□□ -0.9
CD47-204ENST00000471694 NUP153P49790 1475 aaKnown RBP9.44□□□□□ -0.9
CD47-204ENST00000471694 EIF4E1BA6NMX2 242 aaKnown RBP9.44□□□□□ -0.9
CD47-204ENST00000471694 TTLL4Q14679 1199 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 TMTC4Q5T4D3 741 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 FAM149B1Q96BN6 582 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 SEC31BQ9NQW1 1179 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 EFCAB6Q5THR3 1501 aa9.44□□□□□ -0.9
CD47-204ENST00000471694 SNAP25P60880 206 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 SARNPP82979 210 aaKnown RBP9.43□□□□□ -0.9
CD47-204ENST00000471694 SNW1Q13573 536 aaKnown RBP9.43□□□□□ -0.9
CD47-204ENST00000471694 EZH2Q15910 746 aaKnown RBP9.43□□□□□ -0.9
CD47-204ENST00000471694 ACCSLQ4AC99 568 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 AFG1LQ8WV93 481 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 MFSD1Q9H3U5 465 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 FBXO40Q9UH90 709 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 CCDC66A2RUB6 948 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 ASNSP08243 561 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 EIF4A1P60842 406 aaKnown RBP9.43□□□□□ -0.9
CD47-204ENST00000471694 TSPY1Q01534 308 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 CCDC184Q52MB2 194 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 SIX6OS1Q8N1H7 587 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 OR6J1Q8NGC5 347 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.43□□□□□ -0.9
CD47-204ENST00000471694 TMX3Q96JJ7 454 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 SUDS3Q9H7L9 328 aaPredicted RBP9.43□□□□□ -0.9
CD47-204ENST00000471694 PLEKHG1Q9ULL1 1385 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 BMP2KLQ5H9B9 411 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 SDE2Q6IQ49 451 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 YIPF2Q9BWQ6 316 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 HNRNPDLO14979 420 aaKnown RBP9.43□□□□□ -0.9
CD47-204ENST00000471694 CYP2B6P20813 491 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 CSGALNACT2Q8N6G5 542 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 ALKBH8Q96BT7 664 aaKnown RBP9.43□□□□□ -0.9
CD47-204ENST00000471694 HAUS1Q96CS2 278 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 DYNC1I1O14576 645 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 VEPH1Q14D04 833 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 PRPF38AQ8NAV1 312 aaKnown RBP9.43□□□□□ -0.9
CD47-204ENST00000471694 TDRD3Q9H7E2 651 aaKnown RBP9.43□□□□□ -0.9
CD47-204ENST00000471694 RPF1Q9H9Y2 349 aaKnown RBP9.43□□□□□ -0.9
CD47-204ENST00000471694 CNOT7Q9UIV1 285 aaKnown RBP9.43□□□□□ -0.9
CD47-204ENST00000471694 GUCA1BQ9UMX6 200 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 KCNJ14Q9UNX9 436 aa9.43□□□□□ -0.9
CD47-204ENST00000471694 FOSP01100 380 aaPredicted RBP9.42□□□□□ -0.9
CD47-204ENST00000471694 IGFBP4P22692 258 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 RNF217Q8TC41 542 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.92e-6■■■□□ 15.9
CD47-204ENST00000471694 CCDC127Q96BQ5 260 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 SCYL1Q96KG9 808 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 TTC14Q96N46 770 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 NAP1L3Q99457 506 aaPredicted RBP9.42□□□□□ -0.9
CD47-204ENST00000471694 TRPC7Q9HCX4 862 aa9.42□□□□□ -0.9
CD47-204ENST00000471694 RAB20Q9NX57 234 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms