RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 KIF28PB7ZC32 967 aa20.09■□□□□ 0.81
HSPG2-208ENST00000471322 CYP2C8P10632 490 aa20.09■□□□□ 0.81
HSPG2-208ENST00000471322 NASPP49321 788 aaPredicted RBP20.09■□□□□ 0.81
HSPG2-208ENST00000471322 CEBPZQ03701 1054 aaKnown RBP20.09■□□□□ 0.81
HSPG2-208ENST00000471322 ICA1Q05084 483 aa20.09■□□□□ 0.81
HSPG2-208ENST00000471322 SRBD1Q8N5C6 995 aaKnown RBP20.09■□□□□ 0.81
HSPG2-208ENST00000471322 PTPRFP10586 1907 aa20.09■□□□□ 0.81
HSPG2-208ENST00000471322 ECM2O94769 699 aaPredicted RBP20.09■□□□□ 0.81
HSPG2-208ENST00000471322 PKN1Q16512 942 aa20.09■□□□□ 0.81
HSPG2-208ENST00000471322 ANKRD23Q86SG2 305 aa20.09■□□□□ 0.81
HSPG2-208ENST00000471322 NOSTRINQ8IVI9 506 aa20.09■□□□□ 0.81
HSPG2-208ENST00000471322 GRPEL1Q9HAV7 217 aa20.09■□□□□ 0.81
HSPG2-208ENST00000471322 CASP8AP2Q9UKL3 1982 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 SYCE3A1L190 88 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 STK38Q15208 465 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 SF3A1Q15459 793 aaKnown RBP20.08■□□□□ 0.8
HSPG2-208ENST00000471322 ANO1Q5XXA6 986 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 GAS2L3Q86XJ1 694 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 SIAH1Q8IUQ4 282 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 DIS3L2Q8IYB7 885 aaKnown RBP20.08■□□□□ 0.8
HSPG2-208ENST00000471322 FAM177A1Q8N128 213 aaPredicted RBP20.08■□□□□ 0.8
HSPG2-208ENST00000471322 LINC00301Q8NCQ3 95 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 BICD2Q8TD16 824 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 CEP95Q96GE4 821 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 PGBD1Q96JS3 809 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 BRMS1Q9HCU9 246 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 EMILIN3Q9NT22 766 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 DDX19AQ9NUU7 478 aaKnown RBP20.08■□□□□ 0.8
HSPG2-208ENST00000471322 TMOD4Q9NZQ9 345 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 CNTNAP5Q8WYK1 1306 aa20.08■□□□□ 0.8
HSPG2-208ENST00000471322 SMARCA1P28370 1054 aa20.07■□□□□ 0.8
HSPG2-208ENST00000471322 ME1P48163 572 aa20.07■□□□□ 0.8
HSPG2-208ENST00000471322 MTMR4Q9NYA4 1195 aa20.07■□□□□ 0.8
HSPG2-208ENST00000471322 AGTPBP1Q9UPW5 1226 aa20.07■□□□□ 0.8
HSPG2-208ENST00000471322 IGKV6D-41A0A0C4DH26 115 aa20.06■□□□□ 0.8
HSPG2-208ENST00000471322 PALM3A6NDB9 673 aaPredicted RBP20.06■□□□□ 0.8
HSPG2-208ENST00000471322 RAD21O60216 631 aa20.06■□□□□ 0.8
HSPG2-208ENST00000471322 EEF2P13639 858 aaKnown RBP20.06■□□□□ 0.8
HSPG2-208ENST00000471322 PFKFB3Q16875 520 aaPredicted RBP20.06■□□□□ 0.8
HSPG2-208ENST00000471322 COL13A1Q5TAT6 717 aaPredicted RBP20.06■□□□□ 0.8
HSPG2-208ENST00000471322 ZNF296Q8WUU4 475 aaPredicted RBP20.06■□□□□ 0.8
HSPG2-208ENST00000471322 ZFYVE28Q9HCC9 887 aa20.06■□□□□ 0.8
HSPG2-208ENST00000471322 MAD2L2Q9UI95 211 aa20.06■□□□□ 0.8
HSPG2-208ENST00000471322 KCNJ14Q9UNX9 436 aa20.06■□□□□ 0.8
HSPG2-208ENST00000471322 C19orf81C9J6K1 198 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 GPR25O00155 361 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 SPTLC2O15270 562 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 SCG2P13521 617 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 TPRNQ4KMQ1 711 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 SH3D19Q5HYK7 790 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 ADALQ6DHV7 355 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 SPICE1Q8N0Z3 855 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 PROCA1Q8NCQ7 364 aaPredicted RBP20.05■□□□□ 0.8
HSPG2-208ENST00000471322 PHF20Q9BVI0 1012 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 SH3GLB2Q9NR46 395 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 CPA4Q9UI42 421 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 CLIC4Q9Y696 253 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 A0A1W2PQ27 194 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 A0A1W2PQ64 194 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 A0A1W2PQD8 194 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 BTBD18B2RXH4 712 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 TTLL1O95922 423 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 PARP1P09874 1014 aaKnown RBP20.05■□□□□ 0.8
HSPG2-208ENST00000471322 SLC39A14Q15043 492 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 RILPL1Q5EBL4 403 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 KIAA1755Q5JYT7 1200 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 USP17L2Q6R6M4 530 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 FTOQ9C0B1 505 aaKnown RBP eCLIP20.05■□□□□ 0.8
HSPG2-208ENST00000471322 KIAA1683Q9H0B3 1180 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 KANSL2Q9H9L4 492 aa20.05■□□□□ 0.8
HSPG2-208ENST00000471322 BRCA2P51587 3418 aa20.04■□□□□ 0.8
HSPG2-208ENST00000471322 LIG1P18858 919 aa20.04■□□□□ 0.8
HSPG2-208ENST00000471322 KRT2P35908 639 aa20.04■□□□□ 0.8
HSPG2-208ENST00000471322 SPZ1Q9BXG8 430 aa20.04■□□□□ 0.8
HSPG2-208ENST00000471322 CFHR5Q9BXR6 569 aa20.04■□□□□ 0.8
HSPG2-208ENST00000471322 ARHGEF10LQ9HCE6 1279 aa20.04■□□□□ 0.8
HSPG2-208ENST00000471322 TLR2O60603 784 aa20.03■□□□□ 0.8
HSPG2-208ENST00000471322 PPP6R2O75170 966 aa20.03■□□□□ 0.8
HSPG2-208ENST00000471322 XRCC6P12956 609 aaKnown RBP eCLIP20.03■□□□□ 0.8
HSPG2-208ENST00000471322 VCAM1P19320 739 aa20.03■□□□□ 0.8
HSPG2-208ENST00000471322 CALML3P27482 149 aa20.03■□□□□ 0.8
HSPG2-208ENST00000471322 CCDC73Q6ZRK6 1079 aa20.03■□□□□ 0.8
HSPG2-208ENST00000471322 CCAR1Q8IX12 1150 aaKnown RBP20.03■□□□□ 0.8
HSPG2-208ENST00000471322 SMCR8Q8TEV9 937 aaPredicted RBP20.03■□□□□ 0.8
HSPG2-208ENST00000471322 PARK7Q99497 189 aaKnown RBP20.03■□□□□ 0.8
HSPG2-208ENST00000471322 NUP62CLQ9H1M0 184 aa20.03■□□□□ 0.8
HSPG2-208ENST00000471322 TSPY26PQ9H489 355 aa20.03■□□□□ 0.8
HSPG2-208ENST00000471322 DACT1Q9NYF0 836 aa20.03■□□□□ 0.8
HSPG2-208ENST00000471322 VPS54Q9P1Q0 977 aa20.03■□□□□ 0.8
HSPG2-208ENST00000471322 CLIP2Q9UDT6 1046 aa20.03■□□□□ 0.8
HSPG2-208ENST00000471322 PCDHA7Q9UN72 937 aa20.03■□□□□ 0.8
HSPG2-208ENST00000471322 KLRF2D3W0D1 207 aa20.02■□□□□ 0.8
HSPG2-208ENST00000471322 USP14P54578 494 aa20.02■□□□□ 0.8
HSPG2-208ENST00000471322 STAG2Q8N3U4 1231 aa20.02■□□□□ 0.8
HSPG2-208ENST00000471322 ASCC2Q9H1I8 757 aaPredicted RBP20.02■□□□□ 0.8
HSPG2-208ENST00000471322 ZCCHC17Q9NP64 241 aaKnown RBP20.02■□□□□ 0.8
HSPG2-208ENST00000471322 PRDM10Q9NQV6 1147 aa20.02■□□□□ 0.8
HSPG2-208ENST00000471322 LOC285556D6RIA3 1793 aa20.02■□□□□ 0.8
HSPG2-208ENST00000471322 PEX10O60683 326 aa20.02■□□□□ 0.79
HSPG2-208ENST00000471322 ASPRV1Q53RT3 343 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms