RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.77□□□□□ -0.69
SF3A1-206ENST00000471037 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.77□□□□□ -0.69
SF3A1-206ENST00000471037 MYADML2A6NDP7 307 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 ZBED4O75132 1171 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 TIMP1P01033 207 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 DNAJB2P25686 324 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 CDK7P50613 346 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 OAZ1P54368 228 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 ACVR2BQ13705 512 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 KCNA10Q16322 511 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 BMP2KLQ5H9B9 411 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 TTC22Q5TAA0 569 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 MFSD5Q6N075 450 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 PCSK9Q8NBP7 692 aaKnown RBP10.77□□□□□ -0.69
SF3A1-206ENST00000471037 GMCL1P1Q8NEA9 526 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 CHST13Q8NET6 341 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 PI4K2BQ8TCG2 481 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 OSBP2Q969R2 916 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 FGD4Q96M96 766 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 GLT1D1Q96MS3 346 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 UPF3AQ9H1J1 476 aaKnown RBP10.77□□□□□ -0.69
SF3A1-206ENST00000471037 ABHD16BQ9H3Z7 469 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 ZNF287Q9HBT7 754 aa10.77□□□□□ -0.69
SF3A1-206ENST00000471037 EPB41L4AQ9HCS5 686 aaPredicted RBP10.77□□□□□ -0.69
SF3A1-206ENST00000471037 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.77□□□□□ -0.69
SF3A1-206ENST00000471037 A0A0U1RQG5 324 aaPredicted RBP10.76□□□□□ -0.69
SF3A1-206ENST00000471037 MINDY4BA8MYZ0 360 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 GPAA1O43292 621 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 ADCY6O43306 1168 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 ASGR1P07306 291 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 ZFYP08048 801 aaPredicted RBP10.76□□□□□ -0.69
SF3A1-206ENST00000471037 C6orf222P0C671 652 aaPredicted RBP10.76□□□□□ -0.69
SF3A1-206ENST00000471037 FDX1P10109 184 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 GNAT2P19087 354 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 GJA9P57773 515 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 NKX3-2P78367 333 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 RASIP1Q5U651 963 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 ARMCX2Q7L311 632 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 CPXCR1Q8N123 301 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 ANKRD35Q8N283 1001 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 CEP95Q96GE4 821 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.76□□□□□ -0.69
SF3A1-206ENST00000471037 KATNBL1Q9H079 304 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 SPC25Q9HBM1 224 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 RAVER2Q9HCJ3 691 aaKnown RBP10.76□□□□□ -0.69
SF3A1-206ENST00000471037 RNF216Q9NWF9 866 aaPredicted RBP10.76□□□□□ -0.69
SF3A1-206ENST00000471037 MTMR4Q9NYA4 1195 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 CLIP2Q9UDT6 1046 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 FEM1BQ9UK73 627 aa10.76□□□□□ -0.69
SF3A1-206ENST00000471037 ARVCFO00192 962 aa10.75□□□□□ -0.69
SF3A1-206ENST00000471037 CTAGE5O15320 804 aa10.75□□□□□ -0.69
SF3A1-206ENST00000471037 RNF113AO15541 343 aaKnown RBP10.75□□□□□ -0.69
SF3A1-206ENST00000471037 TTLL1O95922 423 aa10.75□□□□□ -0.69
SF3A1-206ENST00000471037 PPIGQ13427 754 aaKnown RBP eCLIP10.75□□□□□ -0.69
SF3A1-206ENST00000471037 GRIN2CQ14957 1233 aa10.75□□□□□ -0.69
SF3A1-206ENST00000471037 CCDC144BQ3MJ40 725 aa10.75□□□□□ -0.69
SF3A1-206ENST00000471037 TSHZ3Q63HK5 1081 aa10.75□□□□□ -0.69
SF3A1-206ENST00000471037 CCDC174Q6PII3 467 aa10.75□□□□□ -0.69
SF3A1-206ENST00000471037 STK11IPQ8N1F8 1099 aa10.75□□□□□ -0.69
SF3A1-206ENST00000471037 SYMPKQ92797 1274 aaKnown RBP10.75□□□□□ -0.69
SF3A1-206ENST00000471037 KIFC2Q96AC6 838 aa10.75□□□□□ -0.69
SF3A1-206ENST00000471037 CTDP1Q9Y5B0 961 aaPredicted RBP10.75□□□□□ -0.69
SF3A1-206ENST00000471037 MYH4Q9Y623 1939 aa10.74□□□□□ -0.69
SF3A1-206ENST00000471037 PRDM1O75626 825 aa10.74□□□□□ -0.69
SF3A1-206ENST00000471037 BMP3P12645 472 aa10.74□□□□□ -0.69
SF3A1-206ENST00000471037 GSPT1P15170 499 aaKnown RBP10.74□□□□□ -0.69
SF3A1-206ENST00000471037 TDO2P48775 406 aa10.74□□□□□ -0.69
SF3A1-206ENST00000471037 IRX5P78411 483 aaPredicted RBP10.74□□□□□ -0.69
SF3A1-206ENST00000471037 TMEM240Q5SV17 173 aa10.74□□□□□ -0.69
SF3A1-206ENST00000471037 PSRC1Q6PGN9 363 aaPredicted RBP10.74□□□□□ -0.69
SF3A1-206ENST00000471037 C16orf59Q7L2K0 433 aa10.74□□□□□ -0.69
SF3A1-206ENST00000471037 FAM126BQ8IXS8 530 aa10.74□□□□□ -0.69
SF3A1-206ENST00000471037 CCDC144CPQ8IYA2 1237 aa10.74□□□□□ -0.69
SF3A1-206ENST00000471037 ZNF444Q8N0Y2 327 aaPredicted RBP10.74□□□□□ -0.69
SF3A1-206ENST00000471037 LRRC47Q8N1G4 583 aaKnown RBP10.74□□□□□ -0.69
SF3A1-206ENST00000471037 FAM133AQ8N9E0 248 aa10.74□□□□□ -0.69
SF3A1-206ENST00000471037 NEDD1Q8NHV4 660 aa10.74□□□□□ -0.69
SF3A1-206ENST00000471037 TIFAQ96CG3 184 aa10.74□□□□□ -0.69
SF3A1-206ENST00000471037 ZNF576Q9H609 170 aa10.74□□□□□ -0.69
SF3A1-206ENST00000471037 ACAD9Q9H845 621 aa10.74□□□□□ -0.69
SF3A1-206ENST00000471037 PRUNE2Q8WUY3 3088 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 PATL2C9JE40 543 aaKnown RBP10.73□□□□□ -0.69
SF3A1-206ENST00000471037 M0R2C6 588 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 TLR3O15455 904 aaKnown RBP10.73□□□□□ -0.69
SF3A1-206ENST00000471037 PLA2G6O60733 806 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 CD4P01730 458 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 CSF2RAP15509 400 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 SLC4A3P48751 1232 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 STAT2P52630 851 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 LRRFIP1Q32MZ4 808 aaKnown RBP10.73□□□□□ -0.69
SF3A1-206ENST00000471037 GNASQ5JWF2 1037 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 SLFN13Q68D06 897 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 IFNL3Q8IZI9 196 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 TMEM199Q8N511 208 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 USP38Q8NB14 1042 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 SLC43A3Q8NBI5 491 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 GMCL1Q96IK5 515 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 PBX4Q9BYU1 374 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 ZNF536O15090 1300 aa10.73□□□□□ -0.69
SF3A1-206ENST00000471037 LRRC37A2A6NM11 1700 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms