RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 PPIGQ13427 754 aaKnown RBP eCLIP16.51■□□□□ 0.23
SEMA3F-208ENST00000470737 CCDC144BQ3MJ40 725 aa16.51■□□□□ 0.23
SEMA3F-208ENST00000470737 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.51■□□□□ 0.23
SEMA3F-208ENST00000470737 ARMCX2Q7L311 632 aa16.51■□□□□ 0.23
SEMA3F-208ENST00000470737 LRRC47Q8N1G4 583 aaKnown RBP16.51■□□□□ 0.23
SEMA3F-208ENST00000470737 GMCL1P1Q8NEA9 526 aa16.51■□□□□ 0.23
SEMA3F-208ENST00000470737 MKL1Q969V6 931 aa16.51■□□□□ 0.23
SEMA3F-208ENST00000470737 EPB41L4AQ9HCS5 686 aaPredicted RBP16.51■□□□□ 0.23
SEMA3F-208ENST00000470737 MTMR4Q9NYA4 1195 aa16.51■□□□□ 0.23
SEMA3F-208ENST00000470737 A0A0U1RQG5 324 aaPredicted RBP16.5■□□□□ 0.23
SEMA3F-208ENST00000470737 MYADML2A6NDP7 307 aa16.5■□□□□ 0.23
SEMA3F-208ENST00000470737 PATL2C9JE40 543 aaKnown RBP16.5■□□□□ 0.23
SEMA3F-208ENST00000470737 ASGR1P07306 291 aa16.5■□□□□ 0.23
SEMA3F-208ENST00000470737 BMP3P12645 472 aa16.5■□□□□ 0.23
SEMA3F-208ENST00000470737 DNAJB2P25686 324 aa16.5■□□□□ 0.23
SEMA3F-208ENST00000470737 GNASQ5JWF2 1037 aa16.5■□□□□ 0.23
SEMA3F-208ENST00000470737 PPP4R3BQ5MIZ7 849 aa16.5■□□□□ 0.23
SEMA3F-208ENST00000470737 SLFN13Q68D06 897 aa16.5■□□□□ 0.23
SEMA3F-208ENST00000470737 CCSAPQ6IQ19 270 aaPredicted RBP16.5■□□□□ 0.23
SEMA3F-208ENST00000470737 MFSD5Q6N075 450 aa16.5■□□□□ 0.23
SEMA3F-208ENST00000470737 HOMER2Q9NSB8 354 aa16.5■□□□□ 0.23
SEMA3F-208ENST00000470737 M0R2C6 588 aa16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 ERC2O15083 957 aa16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 STAT2P52630 851 aa16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 GJA9P57773 515 aa16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 TSHZ3Q63HK5 1081 aa16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 CCDC129Q6ZRS4 1044 aa16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 NOL8Q76FK4 1167 aaKnown RBP16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 IFNL3Q8IZI9 196 aa16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 TMEM199Q8N511 208 aa16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 CHURC1Q8WUH1 139 aa16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 SYMPKQ92797 1274 aaKnown RBP16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 UPF3AQ9H1J1 476 aaKnown RBP16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 ACAD9Q9H845 621 aa16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 TBX21Q9UL17 535 aa16.49■□□□□ 0.23
SEMA3F-208ENST00000470737 TMEM232C9JQI7 657 aa16.48■□□□□ 0.23
SEMA3F-208ENST00000470737 ARVCFO00192 962 aa16.48■□□□□ 0.23
SEMA3F-208ENST00000470737 C20orf194Q5TEA3 1177 aa16.48■□□□□ 0.23
SEMA3F-208ENST00000470737 FAM160B2Q86V87 743 aa16.48■□□□□ 0.23
SEMA3F-208ENST00000470737 CCDC144CPQ8IYA2 1237 aa16.48■□□□□ 0.23
SEMA3F-208ENST00000470737 NEDD1Q8NHV4 660 aa16.48■□□□□ 0.23
SEMA3F-208ENST00000470737 TIFAQ96CG3 184 aa16.48■□□□□ 0.23
SEMA3F-208ENST00000470737 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.48■□□□□ 0.23
SEMA3F-208ENST00000470737 NAPBQ9H115 298 aa16.48■□□□□ 0.23
SEMA3F-208ENST00000470737 DCTPP1Q9H773 170 aa16.48■□□□□ 0.23
SEMA3F-208ENST00000470737 PLIN4Q96Q06 1357 aa16.48■□□□□ 0.23
SEMA3F-208ENST00000470737 EYSQ5T1H1 3165 aa16.47■□□□□ 0.23
SEMA3F-208ENST00000470737 CDH23Q9H251 3354 aa16.47■□□□□ 0.23
SEMA3F-208ENST00000470737 ASB14A6NK59 587 aa16.47■□□□□ 0.23
SEMA3F-208ENST00000470737 CDK7P50613 346 aa16.47■□□□□ 0.23
SEMA3F-208ENST00000470737 GRIN2CQ14957 1233 aa16.47■□□□□ 0.23
SEMA3F-208ENST00000470737 TKFCQ3LXA3 575 aa16.47■□□□□ 0.23
SEMA3F-208ENST00000470737 PSRC1Q6PGN9 363 aaPredicted RBP16.47■□□□□ 0.23
SEMA3F-208ENST00000470737 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
SEMA3F-208ENST00000470737 PPP1R12CQ9BZL4 782 aa16.47■□□□□ 0.23
SEMA3F-208ENST00000470737 ZNF576Q9H609 170 aa16.47■□□□□ 0.23
SEMA3F-208ENST00000470737 RNF146Q9NTX7 359 aa16.47■□□□□ 0.23
SEMA3F-208ENST00000470737 MYO9BQ13459 2157 aa16.47■□□□□ 0.23
SEMA3F-208ENST00000470737 TTC41PQ6P2S7 1318 aa16.46■□□□□ 0.23
SEMA3F-208ENST00000470737 ADCY6O43306 1168 aa16.46■□□□□ 0.23
SEMA3F-208ENST00000470737 ZEB2O60315 1214 aa16.46■□□□□ 0.23
SEMA3F-208ENST00000470737 SLC1A4P43007 532 aa16.46■□□□□ 0.23
SEMA3F-208ENST00000470737 IRX5P78411 483 aaPredicted RBP16.46■□□□□ 0.23
SEMA3F-208ENST00000470737 TFAP4Q01664 338 aa16.46■□□□□ 0.23
SEMA3F-208ENST00000470737 TNFAIP2Q03169 654 aa16.46■□□□□ 0.23
SEMA3F-208ENST00000470737 PPARAQ07869 468 aa16.46■□□□□ 0.23
SEMA3F-208ENST00000470737 STAG1Q8WVM7 1258 aa16.46■□□□□ 0.23
SEMA3F-208ENST00000470737 FGD4Q96M96 766 aa16.46■□□□□ 0.23
SEMA3F-208ENST00000470737 GAS2L1Q99501 681 aaPredicted RBP16.46■□□□□ 0.23
SEMA3F-208ENST00000470737 AP5M1Q9H0R1 490 aa16.46■□□□□ 0.23
SEMA3F-208ENST00000470737 MTIF3Q9H2K0 278 aaKnown RBP16.46■□□□□ 0.23
SEMA3F-208ENST00000470737 CABYRO75952 493 aa16.45■□□□□ 0.22
SEMA3F-208ENST00000470737 ALAS1P13196 640 aa16.45■□□□□ 0.22
SEMA3F-208ENST00000470737 CSF2RAP15509 400 aa16.45■□□□□ 0.22
SEMA3F-208ENST00000470737 CNTN2Q02246 1040 aa16.45■□□□□ 0.22
SEMA3F-208ENST00000470737 TMEM240Q5SV17 173 aa16.45■□□□□ 0.22
SEMA3F-208ENST00000470737 FAM126BQ8IXS8 530 aa16.45■□□□□ 0.22
SEMA3F-208ENST00000470737 FAM133AQ8N9E0 248 aa16.45■□□□□ 0.22
SEMA3F-208ENST00000470737 GMCL1Q96IK5 515 aa16.45■□□□□ 0.22
SEMA3F-208ENST00000470737 TRERF1Q96PN7 1200 aa16.45■□□□□ 0.22
SEMA3F-208ENST00000470737 A1CFQ9NQ94 594 aaKnown RBP16.45■□□□□ 0.22
SEMA3F-208ENST00000470737 STX8Q9UNK0 236 aa16.45■□□□□ 0.22
SEMA3F-208ENST00000470737 TSPY2A6NKD2 308 aa16.44■□□□□ 0.22
SEMA3F-208ENST00000470737 MCCP23508 829 aa16.44■□□□□ 0.22
SEMA3F-208ENST00000470737 BEX3Q00994 111 aa16.44■□□□□ 0.22
SEMA3F-208ENST00000470737 TLK2Q86UE8 772 aa16.44■□□□□ 0.22
SEMA3F-208ENST00000470737 CHMP4CQ96CF2 233 aa16.44■□□□□ 0.22
SEMA3F-208ENST00000470737 AGBL1Q96MI9 1066 aa16.44■□□□□ 0.22
SEMA3F-208ENST00000470737 SEC62Q99442 399 aaKnown RBP16.44■□□□□ 0.22
SEMA3F-208ENST00000470737 KATNBL1Q9H079 304 aa16.44■□□□□ 0.22
SEMA3F-208ENST00000470737 MSRAQ9UJ68 235 aa16.44■□□□□ 0.22
SEMA3F-208ENST00000470737 PRUNE2Q8WUY3 3088 aa16.44■□□□□ 0.22
SEMA3F-208ENST00000470737 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.43■□□□□ 0.22
SEMA3F-208ENST00000470737 PLA2G6O60733 806 aa16.43■□□□□ 0.22
SEMA3F-208ENST00000470737 ACRP10323 421 aa16.43■□□□□ 0.22
SEMA3F-208ENST00000470737 RAB30Q15771 203 aa16.43■□□□□ 0.22
SEMA3F-208ENST00000470737 FSCN1Q16658 493 aaKnown RBP16.43■□□□□ 0.22
SEMA3F-208ENST00000470737 ZNF365Q70YC5 407 aa16.43■□□□□ 0.22
SEMA3F-208ENST00000470737 SEZ6LQ9BYH1 1024 aa16.43■□□□□ 0.22
SEMA3F-208ENST00000470737 PBX4Q9BYU1 374 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms