RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 IRF6O14896 467 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 PTMSP20962 102 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 GNA11P29992 359 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 DNM1Q05193 864 aaKnown RBP10□□□□□ -0.81
HDLBP-233ENST00000470710 FMR1Q06787 632 aaKnown RBP eCLIP10□□□□□ -0.811e-7■□□□□ 9.8
HDLBP-233ENST00000470710 CSPP1Q1MSJ5 1256 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 MYSM1Q5VVJ2 828 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 FBXO11Q86XK2 927 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 BLIDQ8IZY5 108 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 PROCA1Q8NCQ7 364 aaPredicted RBP10□□□□□ -0.81
HDLBP-233ENST00000470710 BICD2Q8TD16 824 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 OXER1Q8TDS5 423 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 KIFC2Q96AC6 838 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 OPTNQ96CV9 577 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 SLC10A4Q96EP9 437 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 OTUD5Q96G74 571 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 ZNF396Q96N95 335 aaPredicted RBP10□□□□□ -0.81
HDLBP-233ENST00000470710 AMNQ9BXJ7 453 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 TANGO6Q9C0B7 1094 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 SCAND2PQ9GZW5 306 aaPredicted RBP10□□□□□ -0.81
HDLBP-233ENST00000470710 ZNF408Q9H9D4 720 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 FBXO28Q9NVF7 368 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 PNMA2Q9UL42 364 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 MYPNQ86TC9 1320 aa10□□□□□ -0.81
HDLBP-233ENST00000470710 SMCO2A6NFE2 343 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 USP17L15C9J2P7 530 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 USP17L13C9JLJ4 530 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 USP17L11C9JVI0 530 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 USP17L18D6R9N7 530 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 USP17L22D6RA61 530 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 USP17L17D6RBQ6 530 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 USP17L19D6RCP7 530 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 USP17L20D6RJB6 530 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 KIF3CO14782 793 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 FLOT1O75955 427 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 HOXA7P31268 230 aaPredicted RBP9.99□□□□□ -0.81
HDLBP-233ENST00000470710 ADCY7P51828 1080 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 USP17L24Q0WX57 530 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 NR5A1Q13285 461 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 DGKZQ13574 1117 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 FOXD4L6Q3SYB3 417 aaPredicted RBP9.99□□□□□ -0.81
HDLBP-233ENST00000470710 CST9Q5W186 159 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 FAM173BQ6P4H8 233 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 FOXD4L3Q6VB84 417 aaPredicted RBP9.99□□□□□ -0.81
HDLBP-233ENST00000470710 CATSPERGQ6ZRH7 1159 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 COA7Q96BR5 231 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 CHAMP1Q96JM3 812 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 SLC38A10Q9HBR0 1119 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 RIC8AQ9NPQ8 531 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 CFAP45Q9UL16 551 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 ADAMTS5Q9UNA0 930 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 CNPY2Q9Y2B0 182 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 PCDHA1Q9Y5I3 950 aa9.99□□□□□ -0.81
HDLBP-233ENST00000470710 OTOFQ9HC10 1997 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 ICAM1P05362 532 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 NCLP19338 710 aaKnown RBP9.98□□□□□ -0.81
HDLBP-233ENST00000470710 DSG3P32926 999 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 GJA5P36382 358 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 TRAPPC10P48553 1259 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 NASPP49321 788 aaPredicted RBP9.98□□□□□ -0.81
HDLBP-233ENST00000470710 MRPL12P52815 198 aaKnown RBP9.98□□□□□ -0.81
HDLBP-233ENST00000470710 SNAP25P60880 206 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 SNAPC2Q13487 334 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 MOGSQ13724 837 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 COG2Q14746 738 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 RILPL1Q5EBL4 403 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 FASTKD5Q7L8L6 764 aaKnown RBP9.98□□□□□ -0.81
HDLBP-233ENST00000470710 REXO1Q8N1G1 1221 aaKnown RBP9.98□□□□□ -0.81
HDLBP-233ENST00000470710 CUL5Q93034 780 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 WNK4Q96J92 1243 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 PSTPIP2Q9H939 334 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 POLR3EQ9NVU0 708 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 HOXC10Q9NYD6 342 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 RTEL1Q9NZ71 1219 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 PCDHA6Q9UN73 950 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 PCDHA8Q9Y5H6 950 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 ELP1O95163 1332 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 PASKQ96RG2 1323 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 PHIPQ8WWQ0 1821 aa9.98□□□□□ -0.81
HDLBP-233ENST00000470710 CCDC194A0A1B0GVG4 234 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 VWA5AO00534 786 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 ATP2A1O14983 1001 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 ADAMTS3O15072 1205 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 FIBPO43427 364 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 ZBED4O75132 1171 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 YEATS4O95619 227 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 OAZ1P54368 228 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 EARS2Q5JPH6 523 aaKnown RBP9.97□□□□□ -0.81
HDLBP-233ENST00000470710 TREML2Q5T2D2 321 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 ANO1Q5XXA6 986 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 MCTP2Q6DN12 878 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 KRT25Q7Z3Z0 450 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 SMC1BQ8NDV3 1235 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 REPS2Q8NFH8 660 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 LEO1Q8WVC0 666 aaPredicted RBP9.97□□□□□ -0.81
HDLBP-233ENST00000470710 ATG4CQ96DT6 458 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 SPATA32Q96LK8 384 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 USP28Q96RU2 1077 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 LMBRD1Q9NUN5 540 aa9.97□□□□□ -0.81
HDLBP-233ENST00000470710 TFIP11Q9UBB9 837 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms