RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 DCPSQ96C86 337 aaKnown RBP9.55□□□□□ -0.88
GTF3A-206ENST00000470606 KIAA1683Q9H0B3 1180 aa9.55□□□□□ -0.88
GTF3A-206ENST00000470606 GOPCQ9HD26 462 aa9.55□□□□□ -0.88
GTF3A-206ENST00000470606 CLK2P49760 499 aaKnown RBP9.54□□□□□ -0.88
GTF3A-206ENST00000470606 STAT2P52630 851 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 VGLL4Q14135 290 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 ZNF174Q15697 407 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 CSPP1Q1MSJ5 1256 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 INF2Q27J81 1249 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 ADALQ6DHV7 355 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 SHC4Q6S5L8 630 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 SULF1Q8IWU6 871 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 C4orf32Q8N8J7 132 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 CCDC148Q8NFR7 591 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 WDR18Q9BV38 432 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 DACT1Q9NYF0 836 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 BIN2Q9UBW5 565 aaPredicted RBP9.54□□□□□ -0.88
GTF3A-206ENST00000470606 FBXO2Q9UK22 296 aaPredicted RBP9.54□□□□□ -0.88
GTF3A-206ENST00000470606 PCDHA1Q9Y5I3 950 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 SNCAIPQ9Y6H5 919 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 ZHX2Q9Y6X8 837 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 COL11A1P12107 1806 aaPredicted RBP9.54□□□□□ -0.88
GTF3A-206ENST00000470606 A0A1B0GVL5 298 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 SYCE3A1L190 88 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 VCAM1P19320 739 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 IL17AQ16552 155 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 UBE2SQ16763 222 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 SUPT20HL1Q3ZLR7 823 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 EAPPQ56P03 285 aaPredicted RBP9.54□□□□□ -0.88
GTF3A-206ENST00000470606 SPECC1Q5M775 1068 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 NOL9Q5SY16 702 aaKnown RBP9.54□□□□□ -0.88
GTF3A-206ENST00000470606 JAKMIP3Q5VZ66 844 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 USP49Q70CQ1 688 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 CCAR1Q8IX12 1150 aaKnown RBP9.54□□□□□ -0.88
GTF3A-206ENST00000470606 KCNG4Q8TDN1 519 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 ZC3H15Q8WU90 426 aaKnown RBP9.54□□□□□ -0.88
GTF3A-206ENST00000470606 CDCA5Q96FF9 252 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 WNK4Q96J92 1243 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 CLMNQ96JQ2 1002 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 FEZ1Q99689 392 aa9.54□□□□□ -0.88
GTF3A-206ENST00000470606 TRIM75PA6NK02 468 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 USP17L15C9J2P7 530 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 USP17L13C9JLJ4 530 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 USP17L11C9JVI0 530 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 USP17L18D6R9N7 530 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 USP17L22D6RA61 530 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 USP17L17D6RBQ6 530 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 USP17L19D6RCP7 530 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 USP17L20D6RJB6 530 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 MEIS2O14770 477 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 PLA2G6O60733 806 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 PPP6R2O75170 966 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 NDUFA8P51970 172 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 BACE1P56817 501 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 USP17L24Q0WX57 530 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 IKQ13123 557 aaPredicted RBP9.53□□□□□ -0.88
GTF3A-206ENST00000470606 USH1GQ495M9 461 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 TTC38Q5R3I4 469 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 GALNT17Q6IS24 598 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 USP17L6PQ6QN14 398 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 FAM177A1Q8N128 213 aaPredicted RBP9.53□□□□□ -0.88
GTF3A-206ENST00000470606 ZNF280CQ8ND82 737 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 TBC1D5Q92609 795 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 KIFC2Q96AC6 838 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 TMEM60Q9H2L4 133 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 BRMS1Q9HCU9 246 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 RIC8AQ9NPQ8 531 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 GINM1Q9NU53 330 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 AFG3L2Q9Y4W6 797 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 ZNF536O15090 1300 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 PCNTO95613 3336 aa9.53□□□□□ -0.88
GTF3A-206ENST00000470606 A0A1W2PQ27 194 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 A0A1W2PQ64 194 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 A0A1W2PQD8 194 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 FSD2A1L4K1 749 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 hCG_1984214I3L0E3 225 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 TRAF5O00463 557 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 PTPREP23469 700 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 ADCY7P51828 1080 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 HMGCS2P54868 508 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 ZNF445P59923 1031 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 PTGDRQ13258 359 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 CAMK4Q16566 473 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 MAP1SQ66K74 1059 aaPredicted RBP9.52□□□□□ -0.88
GTF3A-206ENST00000470606 POTEEQ6S8J3 1075 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 FMR1NBQ8N0W7 255 aaPredicted RBP9.52□□□□□ -0.88
GTF3A-206ENST00000470606 REXO1Q8N1G1 1221 aaKnown RBP9.52□□□□□ -0.88
GTF3A-206ENST00000470606 ZNF713Q8N859 430 aaPredicted RBP9.52□□□□□ -0.88
GTF3A-206ENST00000470606 FSIP1Q8NA03 581 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 BICD2Q8TD16 824 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 RANBP17Q9H2T7 1088 aaKnown RBP9.52□□□□□ -0.88
GTF3A-206ENST00000470606 C6orf50Q9HD87 102 aa9.52□□□□□ -0.88
GTF3A-206ENST00000470606 GOLGA6L4A6NEF3 574 aa9.52□□□□□ -0.89
GTF3A-206ENST00000470606 WDR46O15213 610 aaKnown RBP9.52□□□□□ -0.89
GTF3A-206ENST00000470606 CMA1P23946 247 aa9.52□□□□□ -0.89
GTF3A-206ENST00000470606 GNA11P29992 359 aa9.52□□□□□ -0.89
GTF3A-206ENST00000470606 MCM7P33993 719 aa9.52□□□□□ -0.89
GTF3A-206ENST00000470606 MAP3K9P80192 1104 aa9.52□□□□□ -0.89
GTF3A-206ENST00000470606 ATP2C1P98194 919 aaPredicted RBP9.52□□□□□ -0.89
GTF3A-206ENST00000470606 CCDC174Q6PII3 467 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms